RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 IRF7Q92985 503 aa14.29□□□□□ -0.12
RPAIN-205ENST00000536255 SLITRK1Q96PX8 696 aa14.29□□□□□ -0.12
RPAIN-205ENST00000536255 SPAG5Q96R06 1193 aa14.29□□□□□ -0.12
RPAIN-205ENST00000536255 KCNK16Q96T55 309 aa14.29□□□□□ -0.12
RPAIN-205ENST00000536255 NAA15Q9BXJ9 866 aaKnown RBP14.29□□□□□ -0.12
RPAIN-205ENST00000536255 UBXN6Q9BZV1 441 aa14.29□□□□□ -0.12
RPAIN-205ENST00000536255 GANQ9H2C0 597 aa14.29□□□□□ -0.12
RPAIN-205ENST00000536255 FBXO44Q9H4M3 255 aa14.29□□□□□ -0.12
RPAIN-205ENST00000536255 BRD9Q9H8M2 597 aa14.29□□□□□ -0.12
RPAIN-205ENST00000536255 TBC1D17Q9HA65 648 aa14.29□□□□□ -0.12
RPAIN-205ENST00000536255 OBP2AQ9NY56 170 aa14.29□□□□□ -0.12
RPAIN-205ENST00000536255 ARIH1Q9Y4X5 557 aaPredicted RBP14.29□□□□□ -0.12
RPAIN-205ENST00000536255 FOXN3O00409 490 aaPredicted RBP14.28□□□□□ -0.12
RPAIN-205ENST00000536255 ZNF263O14978 683 aa14.28□□□□□ -0.12
RPAIN-205ENST00000536255 TEX33O43247 280 aa14.28□□□□□ -0.12
RPAIN-205ENST00000536255 CBFA2T2O43439 604 aa14.28□□□□□ -0.12
RPAIN-205ENST00000536255 SETSIPP0DME0 302 aa14.28□□□□□ -0.12
RPAIN-205ENST00000536255 AOC1P19801 751 aa14.28□□□□□ -0.12
RPAIN-205ENST00000536255 BRD2P25440 801 aaKnown RBP14.28□□□□□ -0.12
RPAIN-205ENST00000536255 YWHAQP27348 245 aa14.28□□□□□ -0.12
RPAIN-205ENST00000536255 GDI1P31150 447 aa14.28□□□□□ -0.12
RPAIN-205ENST00000536255 KLK7P49862 253 aa14.28□□□□□ -0.12
RPAIN-205ENST00000536255 SLC5A3P53794 718 aa14.28□□□□□ -0.12
RPAIN-205ENST00000536255 STARD6P59095 220 aa14.28□□□□□ -0.12
RPAIN-205ENST00000536255 PRKCQQ04759 706 aa14.28□□□□□ -0.12
RPAIN-205ENST00000536255 NR1I3Q14994 352 aa14.28□□□□□ -0.12
RPAIN-205ENST00000536255 MLF2Q15773 248 aaPredicted RBP14.28□□□□□ -0.12
RPAIN-205ENST00000536255 MEA1Q16626 185 aa14.28□□□□□ -0.12
RPAIN-205ENST00000536255 SLC44A4Q53GD3 710 aa14.28□□□□□ -0.12
RPAIN-205ENST00000536255 IER5LQ5T953 404 aa14.28□□□□□ -0.12
RPAIN-205ENST00000536255 ZNF318Q5VUA4 2279 aa14.28□□□□□ -0.12
RPAIN-205ENST00000536255 CACNA2D4Q7Z3S7 1137 aa14.28□□□□□ -0.12
RPAIN-205ENST00000536255 FMNL3Q8IVF7 1028 aa14.28□□□□□ -0.12
RPAIN-205ENST00000536255 YAF2Q8IY57 180 aa14.28□□□□□ -0.12
RPAIN-205ENST00000536255 FAM71AQ8IYT1 594 aa14.28□□□□□ -0.12
RPAIN-205ENST00000536255 CELF5Q8N6W0 485 aaKnown RBP14.28□□□□□ -0.12
RPAIN-205ENST00000536255 TMEM105Q8N8V8 129 aa14.28□□□□□ -0.12
RPAIN-205ENST00000536255 SHDQ96IW2 340 aa14.28□□□□□ -0.12
RPAIN-205ENST00000536255 NAP1L5Q96NT1 182 aaPredicted RBP14.28□□□□□ -0.12
RPAIN-205ENST00000536255 SMG9Q9H0W8 520 aaKnown RBP14.28□□□□□ -0.12
RPAIN-205ENST00000536255 KCNH6Q9H252 994 aa14.28□□□□□ -0.12
RPAIN-205ENST00000536255 TRPC7Q9HCX4 862 aa14.28□□□□□ -0.12
RPAIN-205ENST00000536255 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.28□□□□□ -0.12
RPAIN-205ENST00000536255 KMT2EQ8IZD2 1858 aa14.27□□□□□ -0.12
RPAIN-205ENST00000536255 NUP210Q8TEM1 1887 aaPredicted RBP14.27□□□□□ -0.12
RPAIN-205ENST00000536255 F8VZ95 297 aa14.27□□□□□ -0.13
RPAIN-205ENST00000536255 M0QYV0 167 aa14.27□□□□□ -0.13
RPAIN-205ENST00000536255 STK25O00506 426 aa14.27□□□□□ -0.13
RPAIN-205ENST00000536255 XPO1O14980 1071 aaKnown RBP14.27□□□□□ -0.13
RPAIN-205ENST00000536255 CYP26A1O43174 497 aa14.27□□□□□ -0.13
RPAIN-205ENST00000536255 THAP12O43422 761 aa14.27□□□□□ -0.13
RPAIN-205ENST00000536255 BEST1O76090 585 aa14.27□□□□□ -0.13
RPAIN-205ENST00000536255 IFRD2Q12894 506 aaPredicted RBP14.27□□□□□ -0.13
RPAIN-205ENST00000536255 TTC30AQ86WT1 665 aa14.27□□□□□ -0.13
RPAIN-205ENST00000536255 PDZD8Q8NEN9 1154 aa14.27□□□□□ -0.13
RPAIN-205ENST00000536255 ZMIZ2Q8NF64 920 aa14.27□□□□□ -0.13
RPAIN-205ENST00000536255 ZNF606Q8WXB4 792 aa14.27□□□□□ -0.13
RPAIN-205ENST00000536255 OVCA2Q8WZ82 227 aa14.27□□□□□ -0.13
RPAIN-205ENST00000536255 TFAP2BQ92481 460 aa14.27□□□□□ -0.13
RPAIN-205ENST00000536255 USP13Q92995 863 aaPredicted RBP14.27□□□□□ -0.13
RPAIN-205ENST00000536255 FBXO32Q969P5 355 aa14.27□□□□□ -0.13
RPAIN-205ENST00000536255 LRRC3BQ96PB8 259 aa14.27□□□□□ -0.13
RPAIN-205ENST00000536255 KIF9Q9HAQ2 790 aa14.27□□□□□ -0.13
RPAIN-205ENST00000536255 NLRC4Q9NPP4 1024 aa14.27□□□□□ -0.13
RPAIN-205ENST00000536255 TRPV5Q9NQA5 729 aa14.27□□□□□ -0.13
RPAIN-205ENST00000536255 TDP1Q9NUW8 608 aa14.27□□□□□ -0.13
RPAIN-205ENST00000536255 TRPM5Q9NZQ8 1165 aa14.27□□□□□ -0.13
RPAIN-205ENST00000536255 AJAP1Q9UKB5 411 aaPredicted RBP14.27□□□□□ -0.13
RPAIN-205ENST00000536255 TRAV19A0A0A6YYK7 116 aa14.26□□□□□ -0.13
RPAIN-205ENST00000536255 C2orf78A6NCI8 922 aa14.26□□□□□ -0.13
RPAIN-205ENST00000536255 ARNTLO00327 626 aa14.26□□□□□ -0.13
RPAIN-205ENST00000536255 TNFRSF10BO14763 440 aa14.26□□□□□ -0.13
RPAIN-205ENST00000536255 CHADO15335 359 aa14.26□□□□□ -0.13
RPAIN-205ENST00000536255 PI15O43692 258 aa14.26□□□□□ -0.13
RPAIN-205ENST00000536255 USP17L7P0C7H9 530 aa14.26□□□□□ -0.13
RPAIN-205ENST00000536255 CCDC172P0C7W6 258 aa14.26□□□□□ -0.13
RPAIN-205ENST00000536255 SOX5P35711 763 aa14.26□□□□□ -0.13
RPAIN-205ENST00000536255 STAT1P42224 750 aa14.26□□□□□ -0.13
RPAIN-205ENST00000536255 PLA2G4AP47712 749 aa14.26□□□□□ -0.13
RPAIN-205ENST00000536255 PDE6CP51160 858 aa14.26□□□□□ -0.13
RPAIN-205ENST00000536255 NUBP1P53384 320 aa14.26□□□□□ -0.13
RPAIN-205ENST00000536255 TAF10Q12962 218 aa14.26□□□□□ -0.13
RPAIN-205ENST00000536255 ZNF268Q14587 947 aaPredicted RBP14.26□□□□□ -0.13
RPAIN-205ENST00000536255 TPRG1Q6ZUI0 275 aa14.26□□□□□ -0.13
RPAIN-205ENST00000536255 PIGZQ86VD9 579 aa14.26□□□□□ -0.13
RPAIN-205ENST00000536255 BPIFB1Q8TDL5 484 aa14.26□□□□□ -0.13
RPAIN-205ENST00000536255 IQCDQ96DY2 449 aa14.26□□□□□ -0.13
RPAIN-205ENST00000536255 PRRX2Q99811 253 aa14.26□□□□□ -0.13
RPAIN-205ENST00000536255 DDX23Q9BUQ8 820 aaKnown RBP14.26□□□□□ -0.13
RPAIN-205ENST00000536255 NUP58Q9BVL2 599 aa14.26□□□□□ -0.13
RPAIN-205ENST00000536255 HEBP1Q9NRV9 189 aa14.26□□□□□ -0.13
RPAIN-205ENST00000536255 IL37Q9NZH6 218 aa14.26□□□□□ -0.13
RPAIN-205ENST00000536255 IFNKQ9P0W0 207 aa14.26□□□□□ -0.13
RPAIN-205ENST00000536255 CCL26Q9Y258 94 aa14.26□□□□□ -0.13
RPAIN-205ENST00000536255 CEP83Q9Y592 693 aa14.26□□□□□ -0.13
RPAIN-205ENST00000536255 OBSL1O75147 1896 aa14.26□□□□□ -0.13
RPAIN-205ENST00000536255 KANSL1LA0AUZ9 987 aa14.25□□□□□ -0.13
RPAIN-205ENST00000536255 FAM92AA1XBS5 289 aa14.25□□□□□ -0.13
RPAIN-205ENST00000536255 ZNF840PA6NDX5 716 aa14.25□□□□□ -0.13
RPAIN-205ENST00000536255 HHLA1C9JL84 531 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms