RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 BANPQ8N9N5 519 aa16.54■□□□□ 0.24
MCF2L-232ENST00000535094 RNF149Q8NC42 400 aa16.54■□□□□ 0.24
MCF2L-232ENST00000535094 ADCY3O60266 1144 aa16.54■□□□□ 0.24
MCF2L-232ENST00000535094 ZC3H11AO75152 810 aaKnown RBP eCLIP16.54■□□□□ 0.24
MCF2L-232ENST00000535094 MIPP30301 263 aa16.54■□□□□ 0.24
MCF2L-232ENST00000535094 C15orf59Q2T9L4 293 aaPredicted RBP16.54■□□□□ 0.24
MCF2L-232ENST00000535094 EBF4Q9BQW3 602 aa16.54■□□□□ 0.24
MCF2L-232ENST00000535094 NUMBLQ9Y6R0 609 aa16.54■□□□□ 0.24
MCF2L-232ENST00000535094 STRCP1A6NGW2 1772 aa16.54■□□□□ 0.24
MCF2L-232ENST00000535094 E5RJQ4 531 aa16.54■□□□□ 0.24
MCF2L-232ENST00000535094 NOP56O00567 594 aaKnown RBP16.54■□□□□ 0.24
MCF2L-232ENST00000535094 VNN1O95497 513 aa16.54■□□□□ 0.24
MCF2L-232ENST00000535094 FESP07332 822 aa16.54■□□□□ 0.24
MCF2L-232ENST00000535094 MFN1Q8IWA4 741 aa16.54■□□□□ 0.24
MCF2L-232ENST00000535094 MAP7D3Q8IWC1 876 aa16.54■□□□□ 0.24
MCF2L-232ENST00000535094 TUBGCP5Q96RT8 1024 aa16.54■□□□□ 0.24
MCF2L-232ENST00000535094 STRA6Q9BX79 667 aa16.54■□□□□ 0.24
MCF2L-232ENST00000535094 TAGLN3Q9UI15 199 aa16.54■□□□□ 0.24
MCF2L-232ENST00000535094 NR2E3Q9Y5X4 410 aa16.54■□□□□ 0.24
MCF2L-232ENST00000535094 LDHAP00338 332 aaKnown RBP16.53■□□□□ 0.24
MCF2L-232ENST00000535094 KDELR1P24390 212 aa16.53■□□□□ 0.24
MCF2L-232ENST00000535094 ABCG1P45844 678 aa16.53■□□□□ 0.24
MCF2L-232ENST00000535094 SNRPFP62306 86 aaKnown RBP16.53■□□□□ 0.24
MCF2L-232ENST00000535094 AP1B1Q10567 949 aa16.53■□□□□ 0.24
MCF2L-232ENST00000535094 CES3Q6UWW8 571 aa16.53■□□□□ 0.24
MCF2L-232ENST00000535094 CDHR3Q6ZTQ4 885 aa16.53■□□□□ 0.24
MCF2L-232ENST00000535094 NME8Q8N427 588 aa16.53■□□□□ 0.24
MCF2L-232ENST00000535094 ZNF302Q9NR11 478 aa16.53■□□□□ 0.24
MCF2L-232ENST00000535094 PDP2Q9P2J9 529 aa16.53■□□□□ 0.24
MCF2L-232ENST00000535094 STX18Q9P2W9 335 aaKnown RBP16.53■□□□□ 0.24
MCF2L-232ENST00000535094 GOLGA8QA0A0J9YX86 632 aa16.53■□□□□ 0.24
MCF2L-232ENST00000535094 GOLGA8OA6NCC3 632 aa16.53■□□□□ 0.24
MCF2L-232ENST00000535094 GOLGA8NF8WBI6 632 aa16.53■□□□□ 0.24
MCF2L-232ENST00000535094 ITGAVP06756 1048 aa16.53■□□□□ 0.24
MCF2L-232ENST00000535094 LYNP07948 512 aa16.53■□□□□ 0.24
MCF2L-232ENST00000535094 IYDQ6PHW0 289 aa16.53■□□□□ 0.24
MCF2L-232ENST00000535094 ADGRD1Q6QNK2 874 aa16.53■□□□□ 0.24
MCF2L-232ENST00000535094 TREML1Q86YW5 311 aa16.53■□□□□ 0.24
MCF2L-232ENST00000535094 GCNAQ96QF7 691 aa16.53■□□□□ 0.24
MCF2L-232ENST00000535094 TIPINQ9BVW5 301 aa16.53■□□□□ 0.24
MCF2L-232ENST00000535094 NIF3L1Q9GZT8 377 aa16.53■□□□□ 0.24
MCF2L-232ENST00000535094 MAN1C1Q9NR34 630 aa16.53■□□□□ 0.24
MCF2L-232ENST00000535094 PXMP2Q9NR77 195 aa16.53■□□□□ 0.24
MCF2L-232ENST00000535094 RHBDL2Q9NX52 303 aa16.53■□□□□ 0.24
MCF2L-232ENST00000535094 IL1RAPL1Q9NZN1 696 aa16.53■□□□□ 0.24
MCF2L-232ENST00000535094 PPM1HQ9ULR3 514 aa16.53■□□□□ 0.24
MCF2L-232ENST00000535094 USP18Q9UMW8 372 aa16.53■□□□□ 0.24
MCF2L-232ENST00000535094 UBIAD1Q9Y5Z9 338 aa16.53■□□□□ 0.24
MCF2L-232ENST00000535094 ZNF541Q9H0D2 1346 aa16.53■□□□□ 0.24
MCF2L-232ENST00000535094 IL1R2P27930 398 aa16.53■□□□□ 0.24
MCF2L-232ENST00000535094 PHF13Q86YI8 300 aaPredicted RBP16.53■□□□□ 0.24
MCF2L-232ENST00000535094 TTC16Q8NEE8 873 aa16.53■□□□□ 0.24
MCF2L-232ENST00000535094 FAM151AQ8WW52 585 aa16.53■□□□□ 0.24
MCF2L-232ENST00000535094 TFAP2BQ92481 460 aa16.53■□□□□ 0.24
MCF2L-232ENST00000535094 PGBD4Q96DM1 585 aa16.53■□□□□ 0.24
MCF2L-232ENST00000535094 ANKRD36BP1Q96IX9 119 aa16.53■□□□□ 0.24
MCF2L-232ENST00000535094 PHACTR1Q9C0D0 580 aa16.53■□□□□ 0.24
MCF2L-232ENST00000535094 DDX18Q9NVP1 670 aaKnown RBP16.53■□□□□ 0.24
MCF2L-232ENST00000535094 STRIP2Q9ULQ0 834 aa16.53■□□□□ 0.24
MCF2L-232ENST00000535094 E9PBE3 544 aa16.52■□□□□ 0.24
MCF2L-232ENST00000535094 MAGEB2O15479 319 aa16.52■□□□□ 0.24
MCF2L-232ENST00000535094 KLHL41O60662 606 aa16.52■□□□□ 0.24
MCF2L-232ENST00000535094 C4BPAP04003 597 aaKnown RBP16.52■□□□□ 0.24
MCF2L-232ENST00000535094 GSTA2P09210 222 aa16.52■□□□□ 0.24
MCF2L-232ENST00000535094 TMED1Q13445 227 aa16.52■□□□□ 0.24
MCF2L-232ENST00000535094 ZNF568Q3ZCX4 644 aa16.52■□□□□ 0.24
MCF2L-232ENST00000535094 DNAL1Q4LDG9 190 aa16.52■□□□□ 0.24
MCF2L-232ENST00000535094 RALGPS1Q5JS13 557 aa16.52■□□□□ 0.24
MCF2L-232ENST00000535094 HACE1Q8IYU2 909 aa16.52■□□□□ 0.24
MCF2L-232ENST00000535094 DEFB107AQ8IZN7 70 aa16.52■□□□□ 0.24
MCF2L-232ENST00000535094 CLMNQ96JQ2 1002 aa16.52■□□□□ 0.24
MCF2L-232ENST00000535094 DHX35Q9H5Z1 703 aaKnown RBP16.52■□□□□ 0.24
MCF2L-232ENST00000535094 ZNF212Q9UDV6 495 aa16.52■□□□□ 0.24
MCF2L-232ENST00000535094 DRG1Q9Y295 367 aaKnown RBP16.52■□□□□ 0.24
MCF2L-232ENST00000535094 RBL1P28749 1068 aa16.52■□□□□ 0.24
MCF2L-232ENST00000535094 SH3PXD2AQ5TCZ1 1133 aa16.52■□□□□ 0.24
MCF2L-232ENST00000535094 TDRPQ86YL5 185 aa16.52■□□□□ 0.24
MCF2L-232ENST00000535094 TMEM130Q8N3G9 435 aa16.52■□□□□ 0.24
MCF2L-232ENST00000535094 PHC3Q8NDX5 983 aa16.52■□□□□ 0.24
MCF2L-232ENST00000535094 HIC2Q96JB3 615 aa16.52■□□□□ 0.24
MCF2L-232ENST00000535094 AGAP3Q96P47 875 aa16.52■□□□□ 0.24
MCF2L-232ENST00000535094 ASCC2Q9H1I8 757 aaPredicted RBP16.52■□□□□ 0.24
MCF2L-232ENST00000535094 DCAF8L1A6NGE4 600 aa16.52■□□□□ 0.23
MCF2L-232ENST00000535094 CREB3O43889 395 aa16.52■□□□□ 0.23
MCF2L-232ENST00000535094 LRCH4O75427 683 aa16.52■□□□□ 0.23
MCF2L-232ENST00000535094 F7P08709 466 aaPredicted RBP16.52■□□□□ 0.23
MCF2L-232ENST00000535094 TYK2P29597 1187 aa16.52■□□□□ 0.23
MCF2L-232ENST00000535094 TFDP2Q14188 446 aa16.52■□□□□ 0.23
MCF2L-232ENST00000535094 XKR3Q5GH77 459 aa16.52■□□□□ 0.23
MCF2L-232ENST00000535094 ICA1LQ8NDH6 482 aa16.52■□□□□ 0.23
MCF2L-232ENST00000535094 GSDMBQ8TAX9 411 aa16.52■□□□□ 0.23
MCF2L-232ENST00000535094 NSUN6Q8TEA1 469 aaKnown RBP16.52■□□□□ 0.23
MCF2L-232ENST00000535094 VCPIP1Q96JH7 1222 aa16.52■□□□□ 0.23
MCF2L-232ENST00000535094 GJD4Q96KN9 370 aaPredicted RBP16.52■□□□□ 0.23
MCF2L-232ENST00000535094 XPNPEP1Q9NQW7 623 aa16.52■□□□□ 0.23
MCF2L-232ENST00000535094 SLC17A6Q9P2U8 582 aa16.52■□□□□ 0.23
MCF2L-232ENST00000535094 ZNRF3Q9ULT6 936 aa16.52■□□□□ 0.23
MCF2L-232ENST00000535094 RIPK3Q9Y572 518 aa16.52■□□□□ 0.23
MCF2L-232ENST00000535094 CXorf49A8MYA2 514 aaPredicted RBP16.51■□□□□ 0.23
MCF2L-232ENST00000535094 NPTXRO95502 500 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms