RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 SLC2A14Q8TDB8 520 aa14.91□□□□□ -0.02
SF3B2-215ENST00000534307 OVCA2Q8WZ82 227 aa14.91□□□□□ -0.02
SF3B2-215ENST00000534307 SMARCE1Q969G3 411 aa14.91□□□□□ -0.02
SF3B2-215ENST00000534307 SLITRK1Q96PX8 696 aa14.91□□□□□ -0.02
SF3B2-215ENST00000534307 FAM126AQ9BYI3 521 aaPredicted RBP14.91□□□□□ -0.02
SF3B2-215ENST00000534307 GTPBP4Q9BZE4 634 aaKnown RBP14.91□□□□□ -0.02
SF3B2-215ENST00000534307 C2orf42Q9NWW7 574 aa14.91□□□□□ -0.02
SF3B2-215ENST00000534307 DUS2Q9NX74 493 aaKnown RBP14.91□□□□□ -0.02
SF3B2-215ENST00000534307 WNT6Q9Y6F9 365 aa14.91□□□□□ -0.02
SF3B2-215ENST00000534307 CILPO75339 1184 aa14.9□□□□□ -0.02
SF3B2-215ENST00000534307 AP1G2O75843 785 aa14.9□□□□□ -0.02
SF3B2-215ENST00000534307 ZDHHC11BP0C7U3 371 aa14.9□□□□□ -0.02
SF3B2-215ENST00000534307 EPB41P11171 864 aaKnown RBP14.9□□□□□ -0.02
SF3B2-215ENST00000534307 BMP6P22004 513 aa14.9□□□□□ -0.02
SF3B2-215ENST00000534307 GJA4P35212 333 aa14.9□□□□□ -0.02
SF3B2-215ENST00000534307 MXI1P50539 228 aa14.9□□□□□ -0.02
SF3B2-215ENST00000534307 FKBP3Q00688 224 aaKnown RBP14.9□□□□□ -0.02
SF3B2-215ENST00000534307 SATB1Q01826 763 aa14.9□□□□□ -0.02
SF3B2-215ENST00000534307 LRRC63Q05C16 580 aa14.9□□□□□ -0.02
SF3B2-215ENST00000534307 NAIF1Q69YI7 327 aaPredicted RBP14.9□□□□□ -0.02
SF3B2-215ENST00000534307 FSTL4Q6MZW2 842 aa14.9□□□□□ -0.02
SF3B2-215ENST00000534307 PDZD8Q8NEN9 1154 aa14.9□□□□□ -0.02
SF3B2-215ENST00000534307 ATP2A3Q93084 1043 aa14.9□□□□□ -0.02
SF3B2-215ENST00000534307 FAXDC2Q96IV6 333 aa14.9□□□□□ -0.02
SF3B2-215ENST00000534307 HNRNPABQ99729 332 aaKnown RBP14.9□□□□□ -0.02
SF3B2-215ENST00000534307 MED10Q9BTT4 135 aa14.9□□□□□ -0.02
SF3B2-215ENST00000534307 IMPG2Q9BZV3 1241 aa14.9□□□□□ -0.02
SF3B2-215ENST00000534307 LINC00597Q9H2U6 94 aa14.9□□□□□ -0.02
SF3B2-215ENST00000534307 MMRN2Q9H8L6 949 aa14.9□□□□□ -0.02
SF3B2-215ENST00000534307 ECT2Q9H8V3 914 aa14.9□□□□□ -0.02
SF3B2-215ENST00000534307 FBRSL1Q9HCM7 1045 aaKnown RBP14.9□□□□□ -0.02
SF3B2-215ENST00000534307 FAM49BQ9NUQ9 324 aa14.9□□□□□ -0.02
SF3B2-215ENST00000534307 COMMD8Q9NX08 183 aa14.9□□□□□ -0.02
SF3B2-215ENST00000534307 NCDNQ9UBB6 729 aa14.9□□□□□ -0.02
SF3B2-215ENST00000534307 HOOK1Q9UJC3 728 aaKnown RBP14.9□□□□□ -0.02
SF3B2-215ENST00000534307 CIZ1Q9ULV3 898 aaPredicted RBP14.9□□□□□ -0.02
SF3B2-215ENST00000534307 TRIM49BA6NDI0 452 aa14.89□□□□□ -0.03
SF3B2-215ENST00000534307 HHLA1C9JL84 531 aa14.89□□□□□ -0.03
SF3B2-215ENST00000534307 K7ESF4 209 aa14.89□□□□□ -0.03
SF3B2-215ENST00000534307 LEFTY2O00292 366 aa14.89□□□□□ -0.03
SF3B2-215ENST00000534307 GADD45BO75293 160 aaPredicted RBP14.89□□□□□ -0.03
SF3B2-215ENST00000534307 CD44P16070 742 aaKnown RBP14.89□□□□□ -0.03
SF3B2-215ENST00000534307 CXCL12P48061 93 aa14.89□□□□□ -0.03
SF3B2-215ENST00000534307 GAB4Q2WGN9 574 aa14.89□□□□□ -0.03
SF3B2-215ENST00000534307 CBWD6Q4V339 395 aa14.89□□□□□ -0.03
SF3B2-215ENST00000534307 CBWD3Q5JTY5 395 aa14.89□□□□□ -0.03
SF3B2-215ENST00000534307 CBWD5Q5RIA9 395 aa14.89□□□□□ -0.03
SF3B2-215ENST00000534307 CPA6Q8N4T0 437 aa14.89□□□□□ -0.03
SF3B2-215ENST00000534307 FBXL13Q8NEE6 735 aa14.89□□□□□ -0.03
SF3B2-215ENST00000534307 ATRIPQ8WXE1 791 aa14.89□□□□□ -0.03
SF3B2-215ENST00000534307 FBXO32Q969P5 355 aa14.89□□□□□ -0.03
SF3B2-215ENST00000534307 ZFRQ96KR1 1074 aaKnown RBP14.89□□□□□ -0.03
SF3B2-215ENST00000534307 NT5C1AQ9BXI3 368 aa14.89□□□□□ -0.03
SF3B2-215ENST00000534307 EPC1Q9H2F5 836 aa14.89□□□□□ -0.03
SF3B2-215ENST00000534307 MAN1B1Q9UKM7 699 aa14.89□□□□□ -0.03
SF3B2-215ENST00000534307 COQ4Q9Y3A0 265 aa14.89□□□□□ -0.03
SF3B2-215ENST00000534307 CPQQ9Y646 472 aa14.89□□□□□ -0.03
SF3B2-215ENST00000534307 FASNP49327 2511 aaKnown RBP14.89□□□□□ -0.03
SF3B2-215ENST00000534307 KIAA1549LQ6ZVL6 1849 aa14.88□□□□□ -0.03
SF3B2-215ENST00000534307 MYH10P35580 1976 aa14.88□□□□□ -0.03
SF3B2-215ENST00000534307 COCHO43405 550 aa14.88□□□□□ -0.03
SF3B2-215ENST00000534307 STX10O60499 249 aa14.88□□□□□ -0.03
SF3B2-215ENST00000534307 ADRB1P08588 477 aa14.88□□□□□ -0.03
SF3B2-215ENST00000534307 SDHBP21912 280 aa14.88□□□□□ -0.03
SF3B2-215ENST00000534307 IFNAR2P48551 515 aa14.88□□□□□ -0.03
SF3B2-215ENST00000534307 PGFP49763 221 aa14.88□□□□□ -0.03
SF3B2-215ENST00000534307 TUBP50607 506 aa14.88□□□□□ -0.03
SF3B2-215ENST00000534307 IFRD2Q12894 506 aaPredicted RBP14.88□□□□□ -0.03
SF3B2-215ENST00000534307 PPP2R5DQ14738 602 aa14.88□□□□□ -0.03
SF3B2-215ENST00000534307 PKN3Q6P5Z2 889 aa14.88□□□□□ -0.03
SF3B2-215ENST00000534307 CLEC20AQ6ZU45 233 aa14.88□□□□□ -0.03
SF3B2-215ENST00000534307 EZH1Q92800 747 aaPredicted RBP14.88□□□□□ -0.03
SF3B2-215ENST00000534307 SLC35C1Q96A29 364 aa14.88□□□□□ -0.03
SF3B2-215ENST00000534307 TSG101Q99816 390 aa14.88□□□□□ -0.03
SF3B2-215ENST00000534307 ARID3AQ99856 593 aa14.88□□□□□ -0.03
SF3B2-215ENST00000534307 FAM124BQ9H5Z6 455 aaPredicted RBP14.88□□□□□ -0.03
SF3B2-215ENST00000534307 RAB20Q9NX57 234 aa14.88□□□□□ -0.03
SF3B2-215ENST00000534307 GMIPQ9P107 970 aa14.88□□□□□ -0.03
SF3B2-215ENST00000534307 CHORDC1Q9UHD1 332 aaPredicted RBP14.88□□□□□ -0.03
SF3B2-215ENST00000534307 CDV3Q9UKY7 258 aaKnown RBP14.88□□□□□ -0.03
SF3B2-215ENST00000534307 MYO16Q9Y6X6 1858 aa14.88□□□□□ -0.03
SF3B2-215ENST00000534307 DCDC2BA2VCK2 349 aa14.87□□□□□ -0.03
SF3B2-215ENST00000534307 ABL1P00519 1130 aa14.87□□□□□ -0.03
SF3B2-215ENST00000534307 EGFP01133 1207 aa14.87□□□□□ -0.03
SF3B2-215ENST00000534307 FAM200BP0CF97 657 aa14.87□□□□□ -0.03
SF3B2-215ENST00000534307 CD58P19256 250 aa14.87□□□□□ -0.03
SF3B2-215ENST00000534307 TGM1P22735 817 aa14.87□□□□□ -0.03
SF3B2-215ENST00000534307 HOXA6P31267 233 aa14.87□□□□□ -0.03
SF3B2-215ENST00000534307 GALK1P51570 392 aa14.87□□□□□ -0.03
SF3B2-215ENST00000534307 NRLP54845 237 aa14.87□□□□□ -0.03
SF3B2-215ENST00000534307 MAP3K7CLP57077 242 aa14.87□□□□□ -0.03
SF3B2-215ENST00000534307 AMPD2Q01433 879 aa14.87□□□□□ -0.03
SF3B2-215ENST00000534307 LMNB2Q03252 620 aa14.87□□□□□ -0.03
SF3B2-215ENST00000534307 DMWDQ09019 674 aa14.87□□□□□ -0.03
SF3B2-215ENST00000534307 GRSF1Q12849 480 aaKnown RBP eCLIP14.87□□□□□ -0.03
SF3B2-215ENST00000534307 TTI2Q6NXR4 508 aa14.87□□□□□ -0.03
SF3B2-215ENST00000534307 FOXR2Q6PJQ5 311 aa14.87□□□□□ -0.03
SF3B2-215ENST00000534307 GPRIN1Q7Z2K8 1008 aa14.87□□□□□ -0.03
SF3B2-215ENST00000534307 CCDC150Q8NCX0 1101 aa14.87□□□□□ -0.03
SF3B2-215ENST00000534307 TTC16Q8NEE8 873 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms