RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 CD72P21854 359 aa14.11□□□□□ -0.15
CAPN1-227ENST00000533909 TYRO3Q06418 890 aa14.11□□□□□ -0.15
CAPN1-227ENST00000533909 BST2Q10589 180 aaKnown RBP14.11□□□□□ -0.15
CAPN1-227ENST00000533909 STILQ15468 1287 aa14.11□□□□□ -0.15
CAPN1-227ENST00000533909 ARHGAP44Q17R89 818 aa14.11□□□□□ -0.15
CAPN1-227ENST00000533909 ITPRIPL2Q3MIP1 535 aa14.11□□□□□ -0.15
CAPN1-227ENST00000533909 FKBP15Q5T1M5 1219 aa14.11□□□□□ -0.15
CAPN1-227ENST00000533909 CWF19L1Q69YN2 538 aaKnown RBP14.11□□□□□ -0.15
CAPN1-227ENST00000533909 C11orf57Q6ZUT1 292 aaPredicted RBP14.11□□□□□ -0.15
CAPN1-227ENST00000533909 GPRIN1Q7Z2K8 1008 aa14.11□□□□□ -0.15
CAPN1-227ENST00000533909 TADA2BQ86TJ2 420 aa14.11□□□□□ -0.15
CAPN1-227ENST00000533909 SIX6OS1Q8N1H7 587 aa14.11□□□□□ -0.15
CAPN1-227ENST00000533909 UBR7Q8N806 425 aa14.11□□□□□ -0.15
CAPN1-227ENST00000533909 TMEM105Q8N8V8 129 aa14.11□□□□□ -0.15
CAPN1-227ENST00000533909 PJA1Q8NG27 643 aa14.11□□□□□ -0.15
CAPN1-227ENST00000533909 MSANTD3Q96H12 275 aa14.11□□□□□ -0.15
CAPN1-227ENST00000533909 LRRC3BQ96PB8 259 aa14.11□□□□□ -0.15
CAPN1-227ENST00000533909 KCNH6Q9H252 994 aa14.11□□□□□ -0.15
CAPN1-227ENST00000533909 C8orf33Q9H7E9 229 aaPredicted RBP14.11□□□□□ -0.15
CAPN1-227ENST00000533909 DUS2Q9NX74 493 aaKnown RBP14.11□□□□□ -0.15
CAPN1-227ENST00000533909 IL37Q9NZH6 218 aa14.11□□□□□ -0.15
CAPN1-227ENST00000533909 TMEM63CQ9P1W3 806 aa14.11□□□□□ -0.15
CAPN1-227ENST00000533909 RAPGEFL1Q9UHV5 662 aa14.11□□□□□ -0.15
CAPN1-227ENST00000533909 NAGPAQ9UK23 515 aa14.11□□□□□ -0.15
CAPN1-227ENST00000533909 CPQQ9Y646 472 aa14.11□□□□□ -0.15
CAPN1-227ENST00000533909 GREB1Q4ZG55 1949 aa14.11□□□□□ -0.15
CAPN1-227ENST00000533909 F5P12259 2224 aa14.1□□□□□ -0.15
CAPN1-227ENST00000533909 ZNF318Q5VUA4 2279 aa14.1□□□□□ -0.15
CAPN1-227ENST00000533909 M0QYV0 167 aa14.1□□□□□ -0.15
CAPN1-227ENST00000533909 XPO1O14980 1071 aaKnown RBP14.1□□□□□ -0.15
CAPN1-227ENST00000533909 MED7O43513 233 aa14.1□□□□□ -0.15
CAPN1-227ENST00000533909 LETM1O95202 739 aaPredicted RBP14.1□□□□□ -0.15
CAPN1-227ENST00000533909 PSEN1P49768 467 aa14.1□□□□□ -0.15
CAPN1-227ENST00000533909 TUBP50607 506 aa14.1□□□□□ -0.15
CAPN1-227ENST00000533909 KIF11P52732 1056 aa14.1□□□□□ -0.15
CAPN1-227ENST00000533909 NUBP1P53384 320 aa14.1□□□□□ -0.15
CAPN1-227ENST00000533909 SLC7A9P82251 487 aa14.1□□□□□ -0.15
CAPN1-227ENST00000533909 AMPD2Q01433 879 aa14.1□□□□□ -0.15
CAPN1-227ENST00000533909 GOLGA8FQ08AF8 430 aa14.1□□□□□ -0.15
CAPN1-227ENST00000533909 GOLGA8DPQ0D2H9 430 aa14.1□□□□□ -0.15
CAPN1-227ENST00000533909 IER5LQ5T953 404 aa14.1□□□□□ -0.15
CAPN1-227ENST00000533909 PIGZQ86VD9 579 aa14.1□□□□□ -0.15
CAPN1-227ENST00000533909 ARHGAP18Q8N392 663 aa14.1□□□□□ -0.15
CAPN1-227ENST00000533909 CPA6Q8N4T0 437 aa14.1□□□□□ -0.15
CAPN1-227ENST00000533909 UBA3Q8TBC4 463 aa14.1□□□□□ -0.15
CAPN1-227ENST00000533909 FAM3CQ92520 227 aa14.1□□□□□ -0.15
CAPN1-227ENST00000533909 ATP2A3Q93084 1043 aa14.1□□□□□ -0.15
CAPN1-227ENST00000533909 EXOC4Q96A65 974 aa14.1□□□□□ -0.15
CAPN1-227ENST00000533909 KREMEN1Q96MU8 473 aa14.1□□□□□ -0.15
CAPN1-227ENST00000533909 CDK5RAP1Q96SZ6 601 aaKnown RBP14.1□□□□□ -0.15
CAPN1-227ENST00000533909 UBXN6Q9BZV1 441 aa14.1□□□□□ -0.15
CAPN1-227ENST00000533909 EBF3Q9H4W6 596 aa14.1□□□□□ -0.15
CAPN1-227ENST00000533909 CCSER2Q9H7U1 834 aa14.1□□□□□ -0.15
CAPN1-227ENST00000533909 LTB4R2Q9NPC1 389 aa14.1□□□□□ -0.15
CAPN1-227ENST00000533909 TAB2Q9NYJ8 693 aa14.1□□□□□ -0.15
CAPN1-227ENST00000533909 GTSE1Q9NYZ3 720 aa14.1□□□□□ -0.15
CAPN1-227ENST00000533909 CFAP97Q9P2B7 532 aa14.1□□□□□ -0.15
CAPN1-227ENST00000533909 NDRG2Q9UN36 371 aaKnown RBP14.1□□□□□ -0.15
CAPN1-227ENST00000533909 OBSL1O75147 1896 aa14.1□□□□□ -0.15
CAPN1-227ENST00000533909 DENND4CQ5VZ89 1909 aa14.09□□□□□ -0.15
CAPN1-227ENST00000533909 A0A1W2PQH9 124 aa14.09□□□□□ -0.15
CAPN1-227ENST00000533909 FAM92AA1XBS5 289 aa14.09□□□□□ -0.15
CAPN1-227ENST00000533909 HHLA1C9JL84 531 aa14.09□□□□□ -0.15
CAPN1-227ENST00000533909 LEFTY2O00292 366 aa14.09□□□□□ -0.15
CAPN1-227ENST00000533909 O00370 1275 aa14.09□□□□□ -0.15
CAPN1-227ENST00000533909 SLC9A3R1O14745 358 aaPredicted RBP14.09□□□□□ -0.15
CAPN1-227ENST00000533909 COCHO43405 550 aa14.09□□□□□ -0.15
CAPN1-227ENST00000533909 PI15O43692 258 aa14.09□□□□□ -0.15
CAPN1-227ENST00000533909 TLR5O60602 858 aa14.09□□□□□ -0.15
CAPN1-227ENST00000533909 OAS1P00973 400 aaKnown RBP14.09□□□□□ -0.15
CAPN1-227ENST00000533909 DCNP07585 359 aaKnown RBP14.09□□□□□ -0.15
CAPN1-227ENST00000533909 RALAP11233 206 aa14.09□□□□□ -0.15
CAPN1-227ENST00000533909 BRD2P25440 801 aaKnown RBP14.09□□□□□ -0.15
CAPN1-227ENST00000533909 PON1P27169 355 aa14.09□□□□□ -0.15
CAPN1-227ENST00000533909 ATP5C1P36542 298 aaKnown RBP14.09□□□□□ -0.15
CAPN1-227ENST00000533909 TKTL1P51854 596 aa14.09□□□□□ -0.15
CAPN1-227ENST00000533909 MLLT6P55198 1093 aaPredicted RBP14.09□□□□□ -0.15
CAPN1-227ENST00000533909 TNK2Q07912 1038 aa14.09□□□□□ -0.15
CAPN1-227ENST00000533909 PDE4CQ08493 712 aa14.09□□□□□ -0.15
CAPN1-227ENST00000533909 USP4Q13107 963 aa14.09□□□□□ -0.15
CAPN1-227ENST00000533909 NR1H3Q13133 447 aa14.09□□□□□ -0.15
CAPN1-227ENST00000533909 ZNF77Q15935 545 aa14.09□□□□□ -0.15
CAPN1-227ENST00000533909 C10orf120Q5SQS8 335 aa14.09□□□□□ -0.15
CAPN1-227ENST00000533909 SNX30Q5VWJ9 437 aa14.09□□□□□ -0.15
CAPN1-227ENST00000533909 TRIM68Q6AZZ1 485 aa14.09□□□□□ -0.15
CAPN1-227ENST00000533909 GJB7Q6PEY0 223 aa14.09□□□□□ -0.15
CAPN1-227ENST00000533909 LCLAT1Q6UWP7 414 aa14.09□□□□□ -0.15
CAPN1-227ENST00000533909 RSRC2Q7L4I2 434 aaKnown RBP14.09□□□□□ -0.15
CAPN1-227ENST00000533909 CCDC186Q7Z3E2 898 aa14.09□□□□□ -0.15
CAPN1-227ENST00000533909 TTC30AQ86WT1 665 aa14.09□□□□□ -0.15
CAPN1-227ENST00000533909 RALGPS2Q86X27 583 aaPredicted RBP14.09□□□□□ -0.15
CAPN1-227ENST00000533909 OSCP1Q8WVF1 389 aa14.09□□□□□ -0.15
CAPN1-227ENST00000533909 RNF38Q9H0F5 515 aa14.09□□□□□ -0.15
CAPN1-227ENST00000533909 VPS16Q9H269 839 aa14.09□□□□□ -0.15
CAPN1-227ENST00000533909 FANCLQ9NW38 375 aa14.09□□□□□ -0.15
CAPN1-227ENST00000533909 SH3BP1Q9Y3L3 701 aa14.09□□□□□ -0.15
CAPN1-227ENST00000533909 WNT6Q9Y6F9 365 aa14.09□□□□□ -0.15
CAPN1-227ENST00000533909 TICRRQ7Z2Z1 1910 aa14.08□□□□□ -0.16
CAPN1-227ENST00000533909 SPECC1L-ADORA2AF8WAN1 911 aa14.08□□□□□ -0.16
CAPN1-227ENST00000533909 ARNTLO00327 626 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms