RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 CCNJLQ8IV13 435 aa11.69□□□□□ -0.54
AMBRA1-211ENST00000533727 TSEN34Q9BSV6 310 aaKnown RBP11.69□□□□□ -0.54
AMBRA1-211ENST00000533727 CIPCQ9C0C6 399 aa11.69□□□□□ -0.54
AMBRA1-211ENST00000533727 ARHGEF38Q9NXL2 777 aa11.69□□□□□ -0.54
AMBRA1-211ENST00000533727 UTP6Q9NYH9 597 aaKnown RBP11.69□□□□□ -0.54
AMBRA1-211ENST00000533727 PCDHA2Q9Y5H9 948 aa11.69□□□□□ -0.54
AMBRA1-211ENST00000533727 hCG_2014768A0A024R1R8 64 aa11.69□□□□□ -0.54
AMBRA1-211ENST00000533727 ACSL3O95573 720 aa11.69□□□□□ -0.54
AMBRA1-211ENST00000533727 TAL1P17542 331 aaPredicted RBP11.69□□□□□ -0.54
AMBRA1-211ENST00000533727 CD52P31358 61 aa11.69□□□□□ -0.54
AMBRA1-211ENST00000533727 NDST1P52848 882 aa11.69□□□□□ -0.54
AMBRA1-211ENST00000533727 GTF2BQ00403 316 aa11.69□□□□□ -0.54
AMBRA1-211ENST00000533727 LRRC52Q8N7C0 313 aa11.69□□□□□ -0.54
AMBRA1-211ENST00000533727 SPATA18Q8TC71 538 aa11.69□□□□□ -0.54
AMBRA1-211ENST00000533727 BRI3BPQ8WY22 251 aa11.69□□□□□ -0.54
AMBRA1-211ENST00000533727 GFM2Q969S9 779 aaKnown RBP11.69□□□□□ -0.54
AMBRA1-211ENST00000533727 LRRC37BQ96QE4 947 aa11.69□□□□□ -0.54
AMBRA1-211ENST00000533727 PDGFDQ9GZP0 370 aaPredicted RBP11.69□□□□□ -0.54
AMBRA1-211ENST00000533727 KLHL11Q9NVR0 708 aa11.69□□□□□ -0.54
AMBRA1-211ENST00000533727 CRLS1Q9UJA2 301 aa11.69□□□□□ -0.54
AMBRA1-211ENST00000533727 WDR91A4D1P6 747 aa11.68□□□□□ -0.54
AMBRA1-211ENST00000533727 GJB1P08034 283 aa11.68□□□□□ -0.54
AMBRA1-211ENST00000533727 ITIH2P19823 946 aa11.68□□□□□ -0.54
AMBRA1-211ENST00000533727 MLH1P40692 756 aa11.68□□□□□ -0.54
AMBRA1-211ENST00000533727 SLC12A3P55017 1021 aa11.68□□□□□ -0.54
AMBRA1-211ENST00000533727 RHOAP61586 193 aa11.68□□□□□ -0.54
AMBRA1-211ENST00000533727 PDAP1Q13442 181 aaKnown RBP11.68□□□□□ -0.54
AMBRA1-211ENST00000533727 BYSLQ13895 437 aaKnown RBP11.68□□□□□ -0.54
AMBRA1-211ENST00000533727 SLC45A4Q5BKX6 768 aa11.68□□□□□ -0.54
AMBRA1-211ENST00000533727 OLFML2BQ68BL8 750 aa11.68□□□□□ -0.54
AMBRA1-211ENST00000533727 PTRHD1Q6GMV3 140 aaKnown RBP11.68□□□□□ -0.54
AMBRA1-211ENST00000533727 CDC26Q8NHZ8 85 aa11.68□□□□□ -0.54
AMBRA1-211ENST00000533727 GIPC2Q8TF65 315 aa11.68□□□□□ -0.54
AMBRA1-211ENST00000533727 VIPAS39Q9H9C1 493 aa11.68□□□□□ -0.54
AMBRA1-211ENST00000533727 RAB6BQ9NRW1 208 aa11.68□□□□□ -0.54
AMBRA1-211ENST00000533727 GEMIN8Q9NWZ8 242 aaKnown RBP11.68□□□□□ -0.54
AMBRA1-211ENST00000533727 MRPS23Q9Y3D9 190 aaKnown RBP11.68□□□□□ -0.54
AMBRA1-211ENST00000533727 ZNF263O14978 683 aa11.68□□□□□ -0.54
AMBRA1-211ENST00000533727 HDAC4P56524 1084 aa11.68□□□□□ -0.54
AMBRA1-211ENST00000533727 FAM47EQ6ZV65 393 aa11.68□□□□□ -0.54
AMBRA1-211ENST00000533727 GSPT2Q8IYD1 628 aaKnown RBP11.68□□□□□ -0.54
AMBRA1-211ENST00000533727 USP33Q8TEY7 942 aa11.68□□□□□ -0.54
AMBRA1-211ENST00000533727 MAML1Q92585 1016 aa11.68□□□□□ -0.54
AMBRA1-211ENST00000533727 RAB23Q9ULC3 237 aa11.68□□□□□ -0.54
AMBRA1-211ENST00000533727 ORC6Q9Y5N6 252 aa11.68□□□□□ -0.54
AMBRA1-211ENST00000533727 EIF4E1BA6NMX2 242 aaKnown RBP11.68□□□□□ -0.54
AMBRA1-211ENST00000533727 CST8O60676 142 aa11.68□□□□□ -0.54
AMBRA1-211ENST00000533727 RBP3P10745 1247 aa11.68□□□□□ -0.54
AMBRA1-211ENST00000533727 TYK2P29597 1187 aa11.68□□□□□ -0.54
AMBRA1-211ENST00000533727 NDUFV1P49821 464 aa11.68□□□□□ -0.54
AMBRA1-211ENST00000533727 OCRLQ01968 901 aa11.68□□□□□ -0.54
AMBRA1-211ENST00000533727 PRKCZQ05513 592 aa11.68□□□□□ -0.54
AMBRA1-211ENST00000533727 TUSC3Q13454 348 aa11.68□□□□□ -0.54
AMBRA1-211ENST00000533727 ART3Q13508 389 aa11.68□□□□□ -0.54
AMBRA1-211ENST00000533727 STAT4Q14765 748 aa11.68□□□□□ -0.54
AMBRA1-211ENST00000533727 SLC39A12Q504Y0 691 aa11.68□□□□□ -0.54
AMBRA1-211ENST00000533727 FASTKD1Q53R41 847 aaKnown RBP11.68□□□□□ -0.54
AMBRA1-211ENST00000533727 ERAP2Q6P179 960 aa11.68□□□□□ -0.54
AMBRA1-211ENST00000533727 ACAD11Q709F0 780 aa11.68□□□□□ -0.54
AMBRA1-211ENST00000533727 METTL3Q86U44 580 aaKnown RBP11.68□□□□□ -0.54
AMBRA1-211ENST00000533727 ADGRE3Q9BY15 652 aa11.68□□□□□ -0.54
AMBRA1-211ENST00000533727 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.68□□□□□ -0.54
AMBRA1-211ENST00000533727 FAM105AQ9NUU6 356 aa11.68□□□□□ -0.54
AMBRA1-211ENST00000533727 BTBD7Q9P203 1132 aa11.68□□□□□ -0.54
AMBRA1-211ENST00000533727 PTCH2Q9Y6C5 1203 aa11.68□□□□□ -0.54
AMBRA1-211ENST00000533727 KCPQ6ZWJ8 1503 aa11.68□□□□□ -0.54
AMBRA1-211ENST00000533727 GSTA4O15217 222 aa11.67□□□□□ -0.54
AMBRA1-211ENST00000533727 AKAP3O75969 853 aa11.67□□□□□ -0.54
AMBRA1-211ENST00000533727 CDC25CP30307 473 aa11.67□□□□□ -0.54
AMBRA1-211ENST00000533727 SLC12A1Q13621 1099 aa11.67□□□□□ -0.54
AMBRA1-211ENST00000533727 UPF3AQ9H1J1 476 aaKnown RBP11.67□□□□□ -0.54
AMBRA1-211ENST00000533727 CREBZFQ9NS37 354 aa11.67□□□□□ -0.54
AMBRA1-211ENST00000533727 PLAGL2Q9UPG8 496 aa11.67□□□□□ -0.54
AMBRA1-211ENST00000533727 A0A0G2JND7 137 aa11.67□□□□□ -0.54
AMBRA1-211ENST00000533727 FOXN3O00409 490 aaPredicted RBP11.67□□□□□ -0.54
AMBRA1-211ENST00000533727 CSDE1O75534 798 aaKnown RBP11.67□□□□□ -0.54
AMBRA1-211ENST00000533727 GLUD1P00367 558 aa11.67□□□□□ -0.54
AMBRA1-211ENST00000533727 DARSP14868 501 aaKnown RBP11.67□□□□□ -0.54
AMBRA1-211ENST00000533727 ITGB5P18084 799 aa11.67□□□□□ -0.54
AMBRA1-211ENST00000533727 SESN2P58004 480 aaPredicted RBP11.67□□□□□ -0.54
AMBRA1-211ENST00000533727 YWHAZP63104 245 aaKnown RBP11.67□□□□□ -0.54
AMBRA1-211ENST00000533727 POU5F1BQ06416 359 aa11.67□□□□□ -0.54
AMBRA1-211ENST00000533727 WASHC5Q12768 1159 aa11.67□□□□□ -0.54
AMBRA1-211ENST00000533727 ACAP1Q15027 740 aa11.67□□□□□ -0.54
AMBRA1-211ENST00000533727 PSMD5Q16401 504 aa11.67□□□□□ -0.54
AMBRA1-211ENST00000533727 ZBED8Q8IZ13 594 aa11.67□□□□□ -0.54
AMBRA1-211ENST00000533727 C7orf61Q8IZ16 206 aa11.67□□□□□ -0.54
AMBRA1-211ENST00000533727 HIPK4Q8NE63 616 aa11.67□□□□□ -0.54
AMBRA1-211ENST00000533727 HELQQ8TDG4 1101 aa11.67□□□□□ -0.54
AMBRA1-211ENST00000533727 C1orf54Q8WWF1 131 aa11.67□□□□□ -0.54
AMBRA1-211ENST00000533727 CCDC124Q96CT7 223 aaKnown RBP11.67□□□□□ -0.54
AMBRA1-211ENST00000533727 ECT2Q9H8V3 914 aa11.67□□□□□ -0.54
AMBRA1-211ENST00000533727 EML4Q9HC35 981 aaKnown RBP11.67□□□□□ -0.54
AMBRA1-211ENST00000533727 ABCC13Q9NSE7 274 aa11.67□□□□□ -0.54
AMBRA1-211ENST00000533727 PPARGC1AQ9UBK2 798 aaKnown RBP11.67□□□□□ -0.54
AMBRA1-211ENST00000533727 SATB2Q9UPW6 733 aa11.67□□□□□ -0.54
AMBRA1-211ENST00000533727 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.67□□□□□ -0.54
AMBRA1-211ENST00000533727 POLBP06746 335 aa11.67□□□□□ -0.54
AMBRA1-211ENST00000533727 CASP4P49662 377 aa11.67□□□□□ -0.54
AMBRA1-211ENST00000533727 ATXN3P54252 364 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms