RNA–Protein interactions for RNA: ENST00000529928.1

COL16A1-216, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-216ENST00000529928 TAF10Q12962 218 aa17.12■□□□□ 0.33
COL16A1-216ENST00000529928 DUOXA2Q1HG44 320 aa17.12■□□□□ 0.33
COL16A1-216ENST00000529928 PREPLQ4J6C6 727 aaPredicted RBP17.12■□□□□ 0.33
COL16A1-216ENST00000529928 MDH1BQ5I0G3 518 aa17.12■□□□□ 0.33
COL16A1-216ENST00000529928 RRAGBQ5VZM2 374 aa17.12■□□□□ 0.33
COL16A1-216ENST00000529928 LRSAM1Q6UWE0 723 aa17.12■□□□□ 0.33
COL16A1-216ENST00000529928 HS2ST1Q7LGA3 356 aa17.12■□□□□ 0.33
COL16A1-216ENST00000529928 TRMT11Q7Z4G4 463 aaKnown RBP17.12■□□□□ 0.33
COL16A1-216ENST00000529928 OR5B17Q8NGF7 314 aa17.12■□□□□ 0.33
COL16A1-216ENST00000529928 KCNV2Q8TDN2 545 aa17.12■□□□□ 0.33
COL16A1-216ENST00000529928 OTUB2Q96DC9 234 aa17.12■□□□□ 0.33
COL16A1-216ENST00000529928 BACH2Q9BYV9 841 aa17.12■□□□□ 0.33
COL16A1-216ENST00000529928 LHX6Q9UPM6 363 aa17.12■□□□□ 0.33
COL16A1-216ENST00000529928 E2F8A0AVK6 867 aa17.11■□□□□ 0.33
COL16A1-216ENST00000529928 ZNF233A6NK53 670 aa17.11■□□□□ 0.33
COL16A1-216ENST00000529928 SERPINF2P08697 491 aa17.11■□□□□ 0.33
COL16A1-216ENST00000529928 MBL2P11226 248 aaPredicted RBP17.11■□□□□ 0.33
COL16A1-216ENST00000529928 RPL6Q02878 288 aaKnown RBP17.11■□□□□ 0.33
COL16A1-216ENST00000529928 GAD2Q05329 585 aa17.11■□□□□ 0.33
COL16A1-216ENST00000529928 RING1Q06587 406 aa17.11■□□□□ 0.33
COL16A1-216ENST00000529928 LY6G5CQ5SRR4 150 aa17.11■□□□□ 0.33
COL16A1-216ENST00000529928 SLC36A4Q6YBV0 504 aa17.11■□□□□ 0.33
COL16A1-216ENST00000529928 NUDT18Q6ZVK8 323 aa17.11■□□□□ 0.33
COL16A1-216ENST00000529928 PHTF2Q8N3S3 785 aa17.11■□□□□ 0.33
COL16A1-216ENST00000529928 PDZD8Q8NEN9 1154 aa17.11■□□□□ 0.33
COL16A1-216ENST00000529928 GTPBP2Q9BX10 602 aaKnown RBP17.11■□□□□ 0.33
COL16A1-216ENST00000529928 ELOVL4Q9GZR5 314 aa17.11■□□□□ 0.33
COL16A1-216ENST00000529928 SNX25Q9H3E2 840 aa17.11■□□□□ 0.33
COL16A1-216ENST00000529928 ZDHHC4Q9NPG8 344 aa17.11■□□□□ 0.33
COL16A1-216ENST00000529928 PTPRJQ12913 1337 aa17.11■□□□□ 0.33
COL16A1-216ENST00000529928 FRMD3A2A2Y4 597 aa17.1■□□□□ 0.33
COL16A1-216ENST00000529928 TBC1D3BA6NDS4 549 aa17.1■□□□□ 0.33
COL16A1-216ENST00000529928 OPHN1O60890 802 aa17.1■□□□□ 0.33
COL16A1-216ENST00000529928 GNL1P36915 607 aaPredicted RBP17.1■□□□□ 0.33
COL16A1-216ENST00000529928 HNRNPDQ14103 355 aaKnown RBP17.1■□□□□ 0.33
COL16A1-216ENST00000529928 BTBD8Q5XKL5 378 aa17.1■□□□□ 0.33
COL16A1-216ENST00000529928 WDR49Q8IV35 697 aa17.1■□□□□ 0.33
COL16A1-216ENST00000529928 ZNF513Q8N8E2 541 aaPredicted RBP17.1■□□□□ 0.33
COL16A1-216ENST00000529928 FGFBP2Q9BYJ0 223 aa17.1■□□□□ 0.33
COL16A1-216ENST00000529928 CAPN10Q9HC96 672 aa17.1■□□□□ 0.33
COL16A1-216ENST00000529928 PANK4Q9NVE7 773 aa17.1■□□□□ 0.33
COL16A1-216ENST00000529928 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.1■□□□□ 0.33
COL16A1-216ENST00000529928 FAM221BA6H8Z2 402 aa17.09■□□□□ 0.33
COL16A1-216ENST00000529928 TACC1O75410 805 aa17.09■□□□□ 0.33
COL16A1-216ENST00000529928 PRPF6O94906 941 aaKnown RBP17.09■□□□□ 0.33
COL16A1-216ENST00000529928 RTN3O95197 1032 aaPredicted RBP17.09■□□□□ 0.33
COL16A1-216ENST00000529928 FAM163BP0C2L3 166 aa17.09■□□□□ 0.33
COL16A1-216ENST00000529928 YWHAQP27348 245 aa17.09■□□□□ 0.33
COL16A1-216ENST00000529928 IFRD2Q12894 506 aaPredicted RBP17.09■□□□□ 0.33
COL16A1-216ENST00000529928 CCDC73Q6ZRK6 1079 aa17.09■□□□□ 0.33
COL16A1-216ENST00000529928 STXBP4Q6ZWJ1 553 aa17.09■□□□□ 0.33
COL16A1-216ENST00000529928 CBWD2Q8IUF1 395 aa17.09■□□□□ 0.33
COL16A1-216ENST00000529928 ETFBKMTQ8IXQ9 262 aa17.09■□□□□ 0.33
COL16A1-216ENST00000529928 NUP93Q8N1F7 819 aa17.09■□□□□ 0.33
COL16A1-216ENST00000529928 OR6B3Q8NGW1 331 aa17.09■□□□□ 0.33
COL16A1-216ENST00000529928 OVCA2Q8WZ82 227 aa17.09■□□□□ 0.33
COL16A1-216ENST00000529928 MRPL45Q9BRJ2 306 aaKnown RBP17.09■□□□□ 0.33
COL16A1-216ENST00000529928 KIAA1586Q9HCI6 787 aa17.09■□□□□ 0.33
COL16A1-216ENST00000529928 DEC1Q9P2X7 70 aa17.09■□□□□ 0.33
COL16A1-216ENST00000529928 FBXO2Q9UK22 296 aaPredicted RBP17.09■□□□□ 0.33
COL16A1-216ENST00000529928 SRPRBQ9Y5M8 271 aaKnown RBP17.09■□□□□ 0.33
COL16A1-216ENST00000529928 CLIC4Q9Y696 253 aa17.09■□□□□ 0.33
COL16A1-216ENST00000529928 PCNX2A6NKB5 2137 aa17.09■□□□□ 0.33
COL16A1-216ENST00000529928 ZFYVE26Q68DK2 2539 aa17.08■□□□□ 0.33
COL16A1-216ENST00000529928 PKD1L2Q7Z442 2459 aa17.08■□□□□ 0.33
COL16A1-216ENST00000529928 PI4KAP42356 2102 aa17.08■□□□□ 0.33
COL16A1-216ENST00000529928 ARHGAP33O14559 1287 aa17.08■□□□□ 0.32
COL16A1-216ENST00000529928 ZBTB24O43167 697 aaPredicted RBP17.08■□□□□ 0.32
COL16A1-216ENST00000529928 HOXC11O43248 304 aaPredicted RBP17.08■□□□□ 0.32
COL16A1-216ENST00000529928 TULP3O75386 442 aa17.08■□□□□ 0.32
COL16A1-216ENST00000529928 HOXB2P14652 356 aa17.08■□□□□ 0.32
COL16A1-216ENST00000529928 PTPN1P18031 435 aaKnown RBP17.08■□□□□ 0.32
COL16A1-216ENST00000529928 GABRG2P18507 467 aa17.08■□□□□ 0.32
COL16A1-216ENST00000529928 CACNA2D1P54289 1103 aa17.08■□□□□ 0.32
COL16A1-216ENST00000529928 ZNF33AQ06730 810 aa17.08■□□□□ 0.32
COL16A1-216ENST00000529928 ZNF423Q2M1K9 1284 aa17.08■□□□□ 0.32
COL16A1-216ENST00000529928 TRAPPC11Q7Z392 1133 aa17.08■□□□□ 0.32
COL16A1-216ENST00000529928 MINDY1Q8N5J2 469 aa17.08■□□□□ 0.32
COL16A1-216ENST00000529928 NAT16Q8N8M0 369 aa17.08■□□□□ 0.32
COL16A1-216ENST00000529928 TERB1Q8NA31 727 aa17.08■□□□□ 0.32
COL16A1-216ENST00000529928 ZFRQ96KR1 1074 aaKnown RBP17.08■□□□□ 0.32
COL16A1-216ENST00000529928 DUSP9Q99956 384 aaKnown RBP17.08■□□□□ 0.32
COL16A1-216ENST00000529928 FSCN3Q9NQT6 498 aa17.08■□□□□ 0.32
COL16A1-216ENST00000529928 TMEM30AQ9NV96 361 aa17.08■□□□□ 0.32
COL16A1-216ENST00000529928 CALCOCO1Q9P1Z2 691 aa17.08■□□□□ 0.32
COL16A1-216ENST00000529928 SH3BP1Q9Y3L3 701 aa17.08■□□□□ 0.32
COL16A1-216ENST00000529928 WDFY3Q8IZQ1 3526 aa17.08■□□□□ 0.32
COL16A1-216ENST00000529928 AKAP13Q12802 2813 aa17.07■□□□□ 0.32
COL16A1-216ENST00000529928 COCHO43405 550 aa17.07■□□□□ 0.32
COL16A1-216ENST00000529928 ZNF217O75362 1048 aa17.07■□□□□ 0.32
COL16A1-216ENST00000529928 SYPP08247 313 aa17.07■□□□□ 0.32
COL16A1-216ENST00000529928 NTSR1P30989 418 aa17.07■□□□□ 0.32
COL16A1-216ENST00000529928 STAT6P42226 847 aa17.07■□□□□ 0.32
COL16A1-216ENST00000529928 TNNC1P63316 161 aa17.07■□□□□ 0.32
COL16A1-216ENST00000529928 C10orf76Q5T2E6 689 aa17.07■□□□□ 0.32
COL16A1-216ENST00000529928 HECTD3Q5T447 861 aa17.07■□□□□ 0.32
COL16A1-216ENST00000529928 CCDC65Q8IXS2 484 aa17.07■□□□□ 0.32
COL16A1-216ENST00000529928 FBXO32Q969P5 355 aa17.07■□□□□ 0.32
COL16A1-216ENST00000529928 ZNF518BQ9C0D4 1074 aa17.07■□□□□ 0.32
COL16A1-216ENST00000529928 SPHK2Q9NRA0 654 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms