RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 PRMT8Q9NR22 394 aaPredicted RBP10.17□□□□□ -0.78
CHD7-208ENST00000528280 TLR8Q9NR97 1041 aaKnown RBP10.17□□□□□ -0.78
CHD7-208ENST00000528280 CHORDC1Q9UHD1 332 aaPredicted RBP10.17□□□□□ -0.78
CHD7-208ENST00000528280 KIAA1257Q9ULG3 409 aa10.17□□□□□ -0.78
CHD7-208ENST00000528280 CCL26Q9Y258 94 aa10.17□□□□□ -0.78
CHD7-208ENST00000528280 COQ4Q9Y3A0 265 aa10.17□□□□□ -0.78
CHD7-208ENST00000528280 NME7Q9Y5B8 376 aa10.17□□□□□ -0.78
CHD7-208ENST00000528280 FASNP49327 2511 aaKnown RBP10.17□□□□□ -0.78
CHD7-208ENST00000528280 E2F8A0AVK6 867 aa10.16□□□□□ -0.78
CHD7-208ENST00000528280 FAM92AA1XBS5 289 aa10.16□□□□□ -0.78
CHD7-208ENST00000528280 C2orf78A6NCI8 922 aa10.16□□□□□ -0.78
CHD7-208ENST00000528280 LEFTY2O00292 366 aa10.16□□□□□ -0.78
CHD7-208ENST00000528280 TNFRSF10BO14763 440 aa10.16□□□□□ -0.78
CHD7-208ENST00000528280 PMM2O15305 246 aa10.16□□□□□ -0.78
CHD7-208ENST00000528280 TADA3O75528 432 aa10.16□□□□□ -0.78
CHD7-208ENST00000528280 PAPSS2O95340 614 aaPredicted RBP10.16□□□□□ -0.78
CHD7-208ENST00000528280 OLFM2O95897 454 aa10.16□□□□□ -0.78
CHD7-208ENST00000528280 HOXA6P31267 233 aa10.16□□□□□ -0.78
CHD7-208ENST00000528280 PSEN1P49768 467 aa10.16□□□□□ -0.78
CHD7-208ENST00000528280 USP46P62068 366 aa10.16□□□□□ -0.78
CHD7-208ENST00000528280 UBE2HP62256 183 aa10.16□□□□□ -0.78
CHD7-208ENST00000528280 TNK2Q07912 1038 aa10.16□□□□□ -0.78
CHD7-208ENST00000528280 GOLGA8FQ08AF8 430 aa10.16□□□□□ -0.78
CHD7-208ENST00000528280 GOLGA8DPQ0D2H9 430 aa10.16□□□□□ -0.78
CHD7-208ENST00000528280 PON2Q15165 354 aa10.16□□□□□ -0.78
CHD7-208ENST00000528280 CCDC142Q17RM4 750 aa10.16□□□□□ -0.78
CHD7-208ENST00000528280 TMEM196Q5HYL7 178 aa10.16□□□□□ -0.78
CHD7-208ENST00000528280 SPOPLQ6IQ16 392 aa10.16□□□□□ -0.78
CHD7-208ENST00000528280 NUDT18Q6ZVK8 323 aa10.16□□□□□ -0.78
CHD7-208ENST00000528280 ADGRG2Q8IZP9 1017 aa10.16□□□□□ -0.78
CHD7-208ENST00000528280 TRIML1Q8N9V2 468 aa10.16□□□□□ -0.78
CHD7-208ENST00000528280 ZBTB44Q8NCP5 570 aa10.16□□□□□ -0.78
CHD7-208ENST00000528280 TTC8Q8TAM2 541 aa10.16□□□□□ -0.78
CHD7-208ENST00000528280 RUBCNQ92622 972 aa10.16□□□□□ -0.78
CHD7-208ENST00000528280 TMEM176AQ96HP8 235 aa10.16□□□□□ -0.78
CHD7-208ENST00000528280 SLC22A12Q96S37 553 aa10.16□□□□□ -0.78
CHD7-208ENST00000528280 DUSP9Q99956 384 aaKnown RBP10.16□□□□□ -0.78
CHD7-208ENST00000528280 P2RY13Q9BPV8 354 aa10.16□□□□□ -0.78
CHD7-208ENST00000528280 NACA2Q9H009 215 aa10.16□□□□□ -0.78
CHD7-208ENST00000528280 RNF38Q9H0F5 515 aa10.16□□□□□ -0.78
CHD7-208ENST00000528280 MMRN2Q9H8L6 949 aa10.16□□□□□ -0.78
CHD7-208ENST00000528280 HPS4Q9NQG7 708 aa10.16□□□□□ -0.78
CHD7-208ENST00000528280 RALYQ9UKM9 306 aaKnown RBP10.16□□□□□ -0.78
CHD7-208ENST00000528280 ZNF638Q14966 1978 aaKnown RBP10.15□□□□□ -0.78
CHD7-208ENST00000528280 DENND4CQ5VZ89 1909 aa10.15□□□□□ -0.78
CHD7-208ENST00000528280 P4HA2O15460 535 aa10.15□□□□□ -0.78
CHD7-208ENST00000528280 CILPO75339 1184 aa10.15□□□□□ -0.78
CHD7-208ENST00000528280 OAS1P00973 400 aaKnown RBP10.15□□□□□ -0.78
CHD7-208ENST00000528280 ZDHHC11BP0C7U3 371 aa10.15□□□□□ -0.78
CHD7-208ENST00000528280 MBL2P11226 248 aaPredicted RBP10.15□□□□□ -0.78
CHD7-208ENST00000528280 PRKCSHP14314 528 aaPredicted RBP10.15□□□□□ -0.78
CHD7-208ENST00000528280 SDHBP21912 280 aa10.15□□□□□ -0.78
CHD7-208ENST00000528280 TBXAS1P24557 533 aaPredicted RBP10.15□□□□□ -0.78
CHD7-208ENST00000528280 GJA4P35212 333 aa10.15□□□□□ -0.78
CHD7-208ENST00000528280 ATP5C1P36542 298 aaKnown RBP10.15□□□□□ -0.78
CHD7-208ENST00000528280 SOX9P48436 509 aa10.15□□□□□ -0.78
CHD7-208ENST00000528280 GALK1P51570 392 aa10.15□□□□□ -0.78
CHD7-208ENST00000528280 SLC5A3P53794 718 aa10.15□□□□□ -0.78
CHD7-208ENST00000528280 CACNA2D1P54289 1103 aa10.15□□□□□ -0.78
CHD7-208ENST00000528280 MAP3K7CLP57077 242 aa10.15□□□□□ -0.78
CHD7-208ENST00000528280 IFRD2Q12894 506 aaPredicted RBP10.15□□□□□ -0.78
CHD7-208ENST00000528280 USP4Q13107 963 aa10.15□□□□□ -0.78
CHD7-208ENST00000528280 CCINQ13939 588 aa10.15□□□□□ -0.78
CHD7-208ENST00000528280 EML3Q32P44 896 aa10.15□□□□□ -0.78
CHD7-208ENST00000528280 DCAF17Q5H9S7 520 aaPredicted RBP10.15□□□□□ -0.78
CHD7-208ENST00000528280 ZNF276Q8N554 614 aa10.15□□□□□ -0.78
CHD7-208ENST00000528280 DCLK2Q8N568 766 aa10.15□□□□□ -0.78
CHD7-208ENST00000528280 C12orf29Q8N999 325 aa10.15□□□□□ -0.78
CHD7-208ENST00000528280 CDK5RAP1Q96SZ6 601 aaKnown RBP10.15□□□□□ -0.78
CHD7-208ENST00000528280 SMOQ99835 787 aa10.15□□□□□ -0.78
CHD7-208ENST00000528280 DUSP16Q9BY84 665 aa10.15□□□□□ -0.78
CHD7-208ENST00000528280 APOBEC3GQ9HC16 384 aaKnown RBP10.15□□□□□ -0.78
CHD7-208ENST00000528280 KRT82Q9NSB4 513 aa10.15□□□□□ -0.78
CHD7-208ENST00000528280 CISHQ9NSE2 258 aa10.15□□□□□ -0.78
CHD7-208ENST00000528280 MAN1B1Q9UKM7 699 aa10.15□□□□□ -0.78
CHD7-208ENST00000528280 RAB23Q9ULC3 237 aa10.15□□□□□ -0.78
CHD7-208ENST00000528280 SCML2Q9UQR0 700 aa10.15□□□□□ -0.78
CHD7-208ENST00000528280 CPQQ9Y646 472 aa10.15□□□□□ -0.78
CHD7-208ENST00000528280 R4GN57 208 aa10.15□□□□□ -0.78
CHD7-208ENST00000528280 F5P12259 2224 aa10.15□□□□□ -0.78
CHD7-208ENST00000528280 CACNA1IQ9P0X4 2223 aa10.15□□□□□ -0.78
CHD7-208ENST00000528280 TICRRQ7Z2Z1 1910 aa10.14□□□□□ -0.79
CHD7-208ENST00000528280 CCDC163A0A0D9SF12 145 aa10.14□□□□□ -0.79
CHD7-208ENST00000528280 CHURC1-FNTBB4DL54 471 aa10.14□□□□□ -0.79
CHD7-208ENST00000528280 LILRB5O75023 590 aa10.14□□□□□ -0.79
CHD7-208ENST00000528280 ADH1CP00326 375 aa10.14□□□□□ -0.79
CHD7-208ENST00000528280 CCDC192P0DO97 292 aa10.14□□□□□ -0.79
CHD7-208ENST00000528280 CCDC130P13994 396 aa10.14□□□□□ -0.79
CHD7-208ENST00000528280 ARSAP15289 507 aa10.14□□□□□ -0.79
CHD7-208ENST00000528280 CD58P19256 250 aa10.14□□□□□ -0.79
CHD7-208ENST00000528280 ADORA2BP29275 332 aa10.14□□□□□ -0.79
CHD7-208ENST00000528280 ATXN1P54253 815 aaKnown RBP10.14□□□□□ -0.79
CHD7-208ENST00000528280 MORC3Q14149 939 aa10.14□□□□□ -0.79
CHD7-208ENST00000528280 ACAP1Q15027 740 aa10.14□□□□□ -0.79
CHD7-208ENST00000528280 CCDC40Q4G0X9 1142 aa10.14□□□□□ -0.79
CHD7-208ENST00000528280 TRIM68Q6AZZ1 485 aa10.14□□□□□ -0.79
CHD7-208ENST00000528280 ISM2Q6H9L7 571 aa10.14□□□□□ -0.79
CHD7-208ENST00000528280 KLHDC10Q6PID8 442 aa10.14□□□□□ -0.79
CHD7-208ENST00000528280 TXNDC11Q6PKC3 985 aa10.14□□□□□ -0.79
CHD7-208ENST00000528280 ARHGAP18Q8N392 663 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms