RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 AP1B1Q10567 949 aa11.85□□□□□ -0.51
CLK4-206ENST00000520878 MDH1BQ5I0G3 518 aa11.85□□□□□ -0.51
CLK4-206ENST00000520878 MARCH8Q5T0T0 291 aa11.85□□□□□ -0.51
CLK4-206ENST00000520878 C9orf57Q5W0N0 161 aa11.85□□□□□ -0.51
CLK4-206ENST00000520878 TMEM40Q8WWA1 233 aa11.85□□□□□ -0.51
CLK4-206ENST00000520878 TGS1Q96RS0 853 aaKnown RBP11.85□□□□□ -0.51
CLK4-206ENST00000520878 BCO2Q9BYV7 579 aa11.85□□□□□ -0.51
CLK4-206ENST00000520878 NR2E3Q9Y5X4 410 aa11.85□□□□□ -0.51
CLK4-206ENST00000520878 KAT6AQ92794 2004 aa11.85□□□□□ -0.51
CLK4-206ENST00000520878 MEFVO15553 781 aaPredicted RBP11.85□□□□□ -0.51
CLK4-206ENST00000520878 IRX4P78413 519 aa11.85□□□□□ -0.51
CLK4-206ENST00000520878 IL9RQ01113 521 aa11.85□□□□□ -0.51
CLK4-206ENST00000520878 TTC30AQ86WT1 665 aa11.85□□□□□ -0.51
CLK4-206ENST00000520878 PPIL6Q8IXY8 311 aa11.85□□□□□ -0.51
CLK4-206ENST00000520878 KATNAL1Q9BW62 490 aa11.85□□□□□ -0.51
CLK4-206ENST00000520878 SIK2Q9H0K1 926 aa11.85□□□□□ -0.51
CLK4-206ENST00000520878 KIF9Q9HAQ2 790 aa11.85□□□□□ -0.51
CLK4-206ENST00000520878 DDX20Q9UHI6 824 aaKnown RBP11.85□□□□□ -0.51
CLK4-206ENST00000520878 TRAPPC3O43617 180 aa11.85□□□□□ -0.51
CLK4-206ENST00000520878 AVILO75366 819 aa11.85□□□□□ -0.51
CLK4-206ENST00000520878 CPP00450 1065 aa11.85□□□□□ -0.51
CLK4-206ENST00000520878 RBL1P28749 1068 aa11.85□□□□□ -0.51
CLK4-206ENST00000520878 ARPP19P56211 112 aa11.85□□□□□ -0.51
CLK4-206ENST00000520878 KLF1Q13351 362 aaPredicted RBP11.85□□□□□ -0.51
CLK4-206ENST00000520878 MFSD14CQ5VZR4 134 aa11.85□□□□□ -0.51
CLK4-206ENST00000520878 LCLAT1Q6UWP7 414 aa11.85□□□□□ -0.51
CLK4-206ENST00000520878 PCGF5Q86SE9 256 aa11.85□□□□□ -0.51
CLK4-206ENST00000520878 ATP11CQ8NB49 1132 aa11.85□□□□□ -0.51
CLK4-206ENST00000520878 AGAP3Q96P47 875 aa11.85□□□□□ -0.51
CLK4-206ENST00000520878 PCDH9Q9HC56 1237 aa11.85□□□□□ -0.51
CLK4-206ENST00000520878 IPPQ9Y573 584 aa11.85□□□□□ -0.51
CLK4-206ENST00000520878 M0QYT0 321 aa11.84□□□□□ -0.51
CLK4-206ENST00000520878 MT-ND3P03897 115 aa11.84□□□□□ -0.51
CLK4-206ENST00000520878 AMPD1P23109 780 aa11.84□□□□□ -0.51
CLK4-206ENST00000520878 HOXA11P31270 313 aaPredicted RBP11.84□□□□□ -0.51
CLK4-206ENST00000520878 NUMBP49757 651 aa11.84□□□□□ -0.51
CLK4-206ENST00000520878 MNAT1P51948 309 aa11.84□□□□□ -0.51
CLK4-206ENST00000520878 SV2CQ496J9 727 aa11.84□□□□□ -0.51
CLK4-206ENST00000520878 ANKRD22Q5VYY1 191 aa11.84□□□□□ -0.51
CLK4-206ENST00000520878 HEATR6Q6AI08 1181 aaKnown RBP11.84□□□□□ -0.51
CLK4-206ENST00000520878 TADA2BQ86TJ2 420 aa11.84□□□□□ -0.51
CLK4-206ENST00000520878 PPP1R14CQ8TAE6 165 aa11.84□□□□□ -0.51
CLK4-206ENST00000520878 LRRC8CQ8TDW0 803 aa11.84□□□□□ -0.51
CLK4-206ENST00000520878 TTC25Q96NG3 672 aa11.84□□□□□ -0.51
CLK4-206ENST00000520878 SNRNP25Q9BV90 132 aaKnown RBP11.84□□□□□ -0.51
CLK4-206ENST00000520878 PITPNM3Q9BZ71 974 aa11.84□□□□□ -0.51
CLK4-206ENST00000520878 AAASQ9NRG9 546 aa11.84□□□□□ -0.51
CLK4-206ENST00000520878 FLRT1Q9NZU1 646 aa11.84□□□□□ -0.51
CLK4-206ENST00000520878 MORF4L1Q9UBU8 362 aa11.84□□□□□ -0.51
CLK4-206ENST00000520878 BCAT1P54687 386 aa11.84□□□□□ -0.51
CLK4-206ENST00000520878 MORF4L2Q15014 288 aa11.84□□□□□ -0.51
CLK4-206ENST00000520878 SOWAHAQ2M3V2 549 aa11.84□□□□□ -0.51
CLK4-206ENST00000520878 FBXW10Q5XX13 1052 aa11.84□□□□□ -0.51
CLK4-206ENST00000520878 DEFB106AQ8N104 65 aa11.84□□□□□ -0.51
CLK4-206ENST00000520878 CYP4X1Q8N118 509 aa11.84□□□□□ -0.51
CLK4-206ENST00000520878 SLC7A14Q8TBB6 771 aa11.84□□□□□ -0.51
CLK4-206ENST00000520878 FBF1Q8TES7 1133 aa11.84□□□□□ -0.51
CLK4-206ENST00000520878 MAGEB5Q9BZ81 275 aa11.84□□□□□ -0.51
CLK4-206ENST00000520878 KLC2Q9H0B6 622 aa11.84□□□□□ -0.51
CLK4-206ENST00000520878 AP4E1Q9UPM8 1137 aa11.84□□□□□ -0.51
CLK4-206ENST00000520878 CDY2AQ9Y6F7 541 aa11.84□□□□□ -0.51
CLK4-206ENST00000520878 SESN2P58004 480 aaPredicted RBP11.84□□□□□ -0.51
CLK4-206ENST00000520878 BST2Q10589 180 aaKnown RBP11.84□□□□□ -0.51
CLK4-206ENST00000520878 PKN2Q16513 984 aaKnown RBP11.84□□□□□ -0.51
CLK4-206ENST00000520878 FAM187BQ17R55 369 aa11.84□□□□□ -0.51
CLK4-206ENST00000520878 CHADLQ6NUI6 762 aa11.84□□□□□ -0.51
CLK4-206ENST00000520878 BBS12Q6ZW61 710 aa11.84□□□□□ -0.51
CLK4-206ENST00000520878 PIGZQ86VD9 579 aa11.84□□□□□ -0.51
CLK4-206ENST00000520878 SCN4BQ8IWT1 228 aa11.84□□□□□ -0.51
CLK4-206ENST00000520878 ZCCHC9Q8N567 271 aaKnown RBP11.84□□□□□ -0.51
CLK4-206ENST00000520878 FAM129AQ9BZQ8 928 aa11.84□□□□□ -0.51
CLK4-206ENST00000520878 DDX43Q9NXZ2 648 aaKnown RBP11.84□□□□□ -0.51
CLK4-206ENST00000520878 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.84□□□□□ -0.51
CLK4-206ENST00000520878 TXNDC16Q9P2K2 825 aa11.84□□□□□ -0.51
CLK4-206ENST00000520878 COL1A2P08123 1366 aa11.84□□□□□ -0.51
CLK4-206ENST00000520878 SMIM35A0A1B0GVV1 85 aa11.83□□□□□ -0.52
CLK4-206ENST00000520878 APOC4-APOC2K7ER74 178 aa11.83□□□□□ -0.52
CLK4-206ENST00000520878 PAPSS1O43252 624 aaPredicted RBP11.83□□□□□ -0.52
CLK4-206ENST00000520878 STK10O94804 968 aaKnown RBP11.83□□□□□ -0.52
CLK4-206ENST00000520878 APOC2P02655 101 aa11.83□□□□□ -0.52
CLK4-206ENST00000520878 CYP2F1P24903 491 aa11.83□□□□□ -0.52
CLK4-206ENST00000520878 SCNN1GP51170 649 aa11.83□□□□□ -0.52
CLK4-206ENST00000520878 ZBTB16Q05516 673 aa11.83□□□□□ -0.52
CLK4-206ENST00000520878 POU5F1BQ06416 359 aa11.83□□□□□ -0.52
CLK4-206ENST00000520878 CA9Q16790 459 aa11.83□□□□□ -0.52
CLK4-206ENST00000520878 EDEM1Q92611 657 aa11.83□□□□□ -0.52
CLK4-206ENST00000520878 SNX27Q96L92 541 aa11.83□□□□□ -0.52
CLK4-206ENST00000520878 KLHL14Q9P2G3 628 aa11.83□□□□□ -0.52
CLK4-206ENST00000520878 SLC12A6Q9UHW9 1150 aa11.83□□□□□ -0.52
CLK4-206ENST00000520878 PSME4Q14997 1843 aa11.83□□□□□ -0.52
CLK4-206ENST00000520878 LOC102724159A0A0B4J2E5 919 aa11.83□□□□□ -0.52
CLK4-206ENST00000520878 MANSC4A6NHS7 340 aaPredicted RBP11.83□□□□□ -0.52
CLK4-206ENST00000520878 MEIS3P2A8K0S8 358 aa11.83□□□□□ -0.52
CLK4-206ENST00000520878 AP1G2O75843 785 aa11.83□□□□□ -0.52
CLK4-206ENST00000520878 AKR1A1P14550 325 aa11.83□□□□□ -0.52
CLK4-206ENST00000520878 CORO7P57737 925 aa11.83□□□□□ -0.52
CLK4-206ENST00000520878 FKBP1BP68106 108 aa11.83□□□□□ -0.52
CLK4-206ENST00000520878 DNAJC3Q13217 504 aa11.83□□□□□ -0.52
CLK4-206ENST00000520878 PWP2Q15269 919 aaKnown RBP11.83□□□□□ -0.52
CLK4-206ENST00000520878 NBPF20Q3BBV1 942 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms