RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 LYSMD2Q8IV50 215 aa-0.29□□□□□ -2.46
RNU6-542P-201ENST00000516405 FAM178BQ8IXR5 827 aa-0.29□□□□□ -2.46
RNU6-542P-201ENST00000516405 LMNTD2Q8IXW0 634 aa-0.29□□□□□ -2.46
RNU6-542P-201ENST00000516405 KIR2DL5AQ8N109 375 aa-0.29□□□□□ -2.46
RNU6-542P-201ENST00000516405 NAGSQ8N159 534 aa-0.29□□□□□ -2.46
RNU6-542P-201ENST00000516405 C7orf31Q8N865 590 aa-0.29□□□□□ -2.46
RNU6-542P-201ENST00000516405 SLC44A5Q8NCS7 719 aa-0.29□□□□□ -2.46
RNU6-542P-201ENST00000516405 ABHD11Q8NFV4 315 aa-0.29□□□□□ -2.46
RNU6-542P-201ENST00000516405 CADM4Q8NFZ8 388 aa-0.29□□□□□ -2.46
RNU6-542P-201ENST00000516405 OR7D4Q8NG98 312 aa-0.29□□□□□ -2.46
RNU6-542P-201ENST00000516405 POC1BQ8TC44 478 aa-0.29□□□□□ -2.46
RNU6-542P-201ENST00000516405 HIC2Q96JB3 615 aa-0.29□□□□□ -2.46
RNU6-542P-201ENST00000516405 PPP1R13BQ96KQ4 1090 aa-0.29□□□□□ -2.46
RNU6-542P-201ENST00000516405 ZNF285Q96NJ3 590 aa-0.29□□□□□ -2.46
RNU6-542P-201ENST00000516405 ZNF300Q96RE9 604 aaPredicted RBP-0.29□□□□□ -2.46
RNU6-542P-201ENST00000516405 SMOC2Q9H3U7 446 aa-0.29□□□□□ -2.46
RNU6-542P-201ENST00000516405 ZNF282Q9UDV7 671 aaPredicted RBP-0.29□□□□□ -2.46
RNU6-542P-201ENST00000516405 VTI1BQ9UEU0 232 aa-0.29□□□□□ -2.46
RNU6-542P-201ENST00000516405 SH2B3Q9UQQ2 575 aa-0.29□□□□□ -2.46
RNU6-542P-201ENST00000516405 SPRR5A0A1B0GTR4 108 aa-0.3□□□□□ -2.46
RNU6-542P-201ENST00000516405 FAM172BPA6NC97 362 aa-0.3□□□□□ -2.46
RNU6-542P-201ENST00000516405 PATL2C9JE40 543 aaKnown RBP-0.3□□□□□ -2.46
RNU6-542P-201ENST00000516405 FAM72CH0Y354 149 aa-0.3□□□□□ -2.46
RNU6-542P-201ENST00000516405 RGS14O43566 566 aa-0.3□□□□□ -2.46
RNU6-542P-201ENST00000516405 ZNF354AO60765 605 aaPredicted RBP-0.3□□□□□ -2.46
RNU6-542P-201ENST00000516405 AGFG2O95081 481 aa-0.3□□□□□ -2.46
RNU6-542P-201ENST00000516405 CRTAMO95727 393 aa-0.3□□□□□ -2.46
RNU6-542P-201ENST00000516405 CYP17A1P05093 508 aa-0.3□□□□□ -2.46
RNU6-542P-201ENST00000516405 ALOX5P09917 674 aa-0.3□□□□□ -2.46
RNU6-542P-201ENST00000516405 RARBP10826 455 aa-0.3□□□□□ -2.46
RNU6-542P-201ENST00000516405 IL2RBP14784 551 aa-0.3□□□□□ -2.46
RNU6-542P-201ENST00000516405 ATF7P17544 494 aaPredicted RBP-0.3□□□□□ -2.46
RNU6-542P-201ENST00000516405 PCSK1P29120 753 aa-0.3□□□□□ -2.46
RNU6-542P-201ENST00000516405 SOX9P48436 509 aa-0.3□□□□□ -2.46
RNU6-542P-201ENST00000516405 GPR15P49685 360 aa-0.3□□□□□ -2.46
RNU6-542P-201ENST00000516405 RAE1P78406 368 aaKnown RBP-0.3□□□□□ -2.46
RNU6-542P-201ENST00000516405 XPCQ01831 940 aaPredicted RBP-0.3□□□□□ -2.46
RNU6-542P-201ENST00000516405 RUNX1T1Q06455 604 aa-0.3□□□□□ -2.46
RNU6-542P-201ENST00000516405 IFRD2Q12894 506 aaPredicted RBP-0.3□□□□□ -2.46
RNU6-542P-201ENST00000516405 TRAF3Q13114 568 aa-0.3□□□□□ -2.46
RNU6-542P-201ENST00000516405 GPS2Q13227 327 aa-0.3□□□□□ -2.46
RNU6-542P-201ENST00000516405 HDAC1Q13547 482 aaPredicted RBP-0.3□□□□□ -2.46
RNU6-542P-201ENST00000516405 HSP90AA2PQ14568 343 aaPredicted RBP-0.3□□□□□ -2.46
RNU6-542P-201ENST00000516405 RASA3Q14644 834 aa-0.3□□□□□ -2.46
RNU6-542P-201ENST00000516405 TBC1D25Q3MII6 688 aa-0.3□□□□□ -2.46
RNU6-542P-201ENST00000516405 CCDC178Q5BJE1 867 aa-0.3□□□□□ -2.46
RNU6-542P-201ENST00000516405 GPR158Q5T848 1215 aa-0.3□□□□□ -2.46
RNU6-542P-201ENST00000516405 FAM72AQ5TYM5 149 aa-0.3□□□□□ -2.46
RNU6-542P-201ENST00000516405 FAM72DQ6L9T8 149 aa-0.3□□□□□ -2.46
RNU6-542P-201ENST00000516405 EXOC3L1Q86VI1 746 aa-0.3□□□□□ -2.46
RNU6-542P-201ENST00000516405 FAM72BQ86X60 149 aa-0.3□□□□□ -2.46
RNU6-542P-201ENST00000516405 SLC41A1Q8IVJ1 513 aa-0.3□□□□□ -2.46
RNU6-542P-201ENST00000516405 GLB1L2Q8IW92 636 aa-0.3□□□□□ -2.46
RNU6-542P-201ENST00000516405 BMPERQ8N8U9 685 aa-0.3□□□□□ -2.46
RNU6-542P-201ENST00000516405 TMIEQ8NEW7 156 aa-0.3□□□□□ -2.46
RNU6-542P-201ENST00000516405 LILRB1Q8NHL6 650 aaPredicted RBP-0.3□□□□□ -2.46
RNU6-542P-201ENST00000516405 FGFBP3Q8TAT2 258 aa-0.3□□□□□ -2.46
RNU6-542P-201ENST00000516405 RTF1Q92541 710 aaKnown RBP-0.3□□□□□ -2.46
RNU6-542P-201ENST00000516405 LPAR1Q92633 364 aa-0.3□□□□□ -2.46
RNU6-542P-201ENST00000516405 NTNG2Q96CW9 530 aa-0.3□□□□□ -2.46
RNU6-542P-201ENST00000516405 LGALS12Q96DT0 336 aa-0.3□□□□□ -2.46
RNU6-542P-201ENST00000516405 KLHL32Q96NJ5 620 aa-0.3□□□□□ -2.46
RNU6-542P-201ENST00000516405 RBM4BQ9BQ04 359 aaKnown RBP-0.3□□□□□ -2.46
RNU6-542P-201ENST00000516405 TUBA1CQ9BQE3 449 aa-0.3□□□□□ -2.46
RNU6-542P-201ENST00000516405 CABLES2Q9BTV7 478 aa-0.3□□□□□ -2.46
RNU6-542P-201ENST00000516405 BOCQ9BWV1 1114 aa-0.3□□□□□ -2.46
RNU6-542P-201ENST00000516405 CELF4Q9BZC1 486 aaKnown RBP-0.3□□□□□ -2.46
RNU6-542P-201ENST00000516405 MVB12BQ9H7P6 319 aa-0.3□□□□□ -2.46
RNU6-542P-201ENST00000516405 PLAC1Q9HBJ0 212 aa-0.3□□□□□ -2.46
RNU6-542P-201ENST00000516405 TMPRSS11EQ9UL52 423 aa-0.3□□□□□ -2.46
RNU6-542P-201ENST00000516405 KCNK7Q9Y2U2 307 aa-0.3□□□□□ -2.46
RNU6-542P-201ENST00000516405 ACTL7AQ9Y615 435 aa-0.3□□□□□ -2.46
RNU6-542P-201ENST00000516405 RPTORQ8N122 1335 aa-0.31□□□□□ -2.46
RNU6-542P-201ENST00000516405 A6NNC1 897 aa-0.31□□□□□ -2.46
RNU6-542P-201ENST00000516405 E9PQ18 207 aa-0.31□□□□□ -2.46
RNU6-542P-201ENST00000516405 SLC16A3O15427 465 aaKnown RBP-0.31□□□□□ -2.46
RNU6-542P-201ENST00000516405 MT-CO3P00414 261 aa-0.31□□□□□ -2.46
RNU6-542P-201ENST00000516405 CRYAAP02489 173 aa-0.31□□□□□ -2.46
RNU6-542P-201ENST00000516405 C6orf222P0C671 652 aaPredicted RBP-0.31□□□□□ -2.46
RNU6-542P-201ENST00000516405 SHC1P29353 583 aa-0.31□□□□□ -2.46
RNU6-542P-201ENST00000516405 ADSLP30566 484 aaPredicted RBP-0.31□□□□□ -2.46
RNU6-542P-201ENST00000516405 HOXD3P31249 432 aaPredicted RBP-0.31□□□□□ -2.46
RNU6-542P-201ENST00000516405 TUBA1BP68363 451 aa-0.31□□□□□ -2.46
RNU6-542P-201ENST00000516405 ENPP2Q13822 863 aa-0.31□□□□□ -2.46
RNU6-542P-201ENST00000516405 RFTN1Q14699 578 aaPredicted RBP-0.31□□□□□ -2.46
RNU6-542P-201ENST00000516405 SLC25A30Q5SVS4 291 aa-0.31□□□□□ -2.46
RNU6-542P-201ENST00000516405 ASPHD1Q5U4P2 390 aa-0.31□□□□□ -2.46
RNU6-542P-201ENST00000516405 GDPD4Q6W3E5 623 aa-0.31□□□□□ -2.46
RNU6-542P-201ENST00000516405 SLC30A10Q6XR72 485 aa-0.31□□□□□ -2.46
RNU6-542P-201ENST00000516405 ANKS3Q6ZW76 656 aa-0.31□□□□□ -2.46
RNU6-542P-201ENST00000516405 FAM57BQ71RH2 274 aa-0.31□□□□□ -2.46
RNU6-542P-201ENST00000516405 DPH6Q7L8W6 267 aa-0.31□□□□□ -2.46
RNU6-542P-201ENST00000516405 NOTCH2NLQ7Z3S9 236 aa-0.31□□□□□ -2.46
RNU6-542P-201ENST00000516405 TICAM1Q8IUC6 712 aa-0.31□□□□□ -2.46
RNU6-542P-201ENST00000516405 PARP8Q8N3A8 854 aa-0.31□□□□□ -2.46
RNU6-542P-201ENST00000516405 C2orf69Q8N8R5 385 aa-0.31□□□□□ -2.46
RNU6-542P-201ENST00000516405 KIR2DL5BQ8NHK3 375 aa-0.31□□□□□ -2.46
RNU6-542P-201ENST00000516405 TMED6Q8WW62 240 aa-0.31□□□□□ -2.46
RNU6-542P-201ENST00000516405 PTPRN2Q92932 1015 aa-0.31□□□□□ -2.46
RNU6-542P-201ENST00000516405 CD101Q93033 1021 aa-0.31□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms