RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 PPP1R2P1Q96PQ5 205 aa13.61□□□□□ -0.23
PCDHA4-202ENST00000512229 BCAS3Q9H6U6 928 aa13.61□□□□□ -0.23
PCDHA4-202ENST00000512229 CDY2AQ9Y6F7 541 aa13.61□□□□□ -0.23
PCDHA4-202ENST00000512229 UBA6A0AVT1 1052 aaPredicted RBP13.61□□□□□ -0.23
PCDHA4-202ENST00000512229 H3BQF6 201 aa13.61□□□□□ -0.23
PCDHA4-202ENST00000512229 B4GALT4O60513 344 aa13.61□□□□□ -0.23
PCDHA4-202ENST00000512229 CHEK2O96017 543 aa13.61□□□□□ -0.23
PCDHA4-202ENST00000512229 FAM153BP0C7A2 387 aa13.61□□□□□ -0.23
PCDHA4-202ENST00000512229 ZBTB48P10074 688 aaPredicted RBP13.61□□□□□ -0.23
PCDHA4-202ENST00000512229 SPRP35270 261 aaPredicted RBP13.61□□□□□ -0.23
PCDHA4-202ENST00000512229 RPL21P46778 160 aaKnown RBP13.61□□□□□ -0.23
PCDHA4-202ENST00000512229 FAM153CQ494X1 144 aa13.61□□□□□ -0.23
PCDHA4-202ENST00000512229 FASTKD1Q53R41 847 aaKnown RBP13.61□□□□□ -0.23
PCDHA4-202ENST00000512229 SPRYD7Q5W111 196 aa13.61□□□□□ -0.23
PCDHA4-202ENST00000512229 EPS8L3Q8TE67 593 aaKnown RBP13.61□□□□□ -0.23
PCDHA4-202ENST00000512229 FBXO32Q969P5 355 aa13.61□□□□□ -0.23
PCDHA4-202ENST00000512229 HES6Q96HZ4 224 aa13.61□□□□□ -0.23
PCDHA4-202ENST00000512229 TEPSINQ96N21 525 aa13.61□□□□□ -0.23
PCDHA4-202ENST00000512229 RPRD1AQ96P16 312 aaPredicted RBP13.61□□□□□ -0.23
PCDHA4-202ENST00000512229 CHST7Q9NS84 486 aa13.61□□□□□ -0.23
PCDHA4-202ENST00000512229 FAM153AQ9UHL3 310 aa13.61□□□□□ -0.23
PCDHA4-202ENST00000512229 CRYBG1Q9Y4K1 1723 aa13.61□□□□□ -0.23
PCDHA4-202ENST00000512229 F8W8V4 182 aa13.61□□□□□ -0.23
PCDHA4-202ENST00000512229 GYG2O15488 501 aa13.61□□□□□ -0.23
PCDHA4-202ENST00000512229 CAND2O75155 1236 aa13.61□□□□□ -0.23
PCDHA4-202ENST00000512229 HAUS5O94927 633 aa13.61□□□□□ -0.23
PCDHA4-202ENST00000512229 PHF13Q86YI8 300 aaPredicted RBP13.61□□□□□ -0.23
PCDHA4-202ENST00000512229 MTIF3Q9H2K0 278 aaKnown RBP13.61□□□□□ -0.23
PCDHA4-202ENST00000512229 CYP2F1P24903 491 aa13.61□□□□□ -0.23
PCDHA4-202ENST00000512229 ELAVL2Q12926 359 aaKnown RBP13.61□□□□□ -0.23
PCDHA4-202ENST00000512229 PCSK7Q16549 785 aa13.61□□□□□ -0.23
PCDHA4-202ENST00000512229 ZNF280DQ6N043 979 aa13.61□□□□□ -0.23
PCDHA4-202ENST00000512229 AADACL2Q6P093 401 aa13.61□□□□□ -0.23
PCDHA4-202ENST00000512229 ATP6V0D2Q8N8Y2 350 aa13.61□□□□□ -0.23
PCDHA4-202ENST00000512229 FBXO36Q8NEA4 188 aa13.61□□□□□ -0.23
PCDHA4-202ENST00000512229 PTPRN2Q92932 1015 aa13.61□□□□□ -0.23
PCDHA4-202ENST00000512229 NAT9Q9BTE0 207 aa13.61□□□□□ -0.23
PCDHA4-202ENST00000512229 TMBIM4Q9HC24 238 aa13.61□□□□□ -0.23
PCDHA4-202ENST00000512229 DNPEPQ9ULA0 475 aa13.61□□□□□ -0.23
PCDHA4-202ENST00000512229 ARL2BPQ9Y2Y0 163 aa13.61□□□□□ -0.23
PCDHA4-202ENST00000512229 MAGEA9P43362 315 aa13.6□□□□□ -0.23
PCDHA4-202ENST00000512229 OCRLQ01968 901 aa13.6□□□□□ -0.23
PCDHA4-202ENST00000512229 SP3Q02447 781 aa13.6□□□□□ -0.23
PCDHA4-202ENST00000512229 ART3Q13508 389 aa13.6□□□□□ -0.23
PCDHA4-202ENST00000512229 RBBP5Q15291 538 aaKnown RBP13.6□□□□□ -0.23
PCDHA4-202ENST00000512229 DEFB106AQ8N104 65 aa13.6□□□□□ -0.23
PCDHA4-202ENST00000512229 HELQQ8TDG4 1101 aa13.6□□□□□ -0.23
PCDHA4-202ENST00000512229 AENQ8WTP8 325 aaKnown RBP13.6□□□□□ -0.23
PCDHA4-202ENST00000512229 GDF3Q9NR23 364 aa13.6□□□□□ -0.23
PCDHA4-202ENST00000512229 SHOC2Q9UQ13 582 aa13.6□□□□□ -0.23
PCDHA4-202ENST00000512229 UMODL1Q5DID0 1318 aa13.6□□□□□ -0.23
PCDHA4-202ENST00000512229 DIAPH2O60879 1101 aa13.6□□□□□ -0.23
PCDHA4-202ENST00000512229 GRM5P41594 1212 aa13.6□□□□□ -0.23
PCDHA4-202ENST00000512229 NOGQ13253 232 aa13.6□□□□□ -0.23
PCDHA4-202ENST00000512229 KDM7AQ6ZMT4 941 aa13.6□□□□□ -0.23
PCDHA4-202ENST00000512229 EIF1ADQ8N9N8 165 aaKnown RBP13.6□□□□□ -0.23
PCDHA4-202ENST00000512229 EDEM1Q92611 657 aa13.6□□□□□ -0.23
PCDHA4-202ENST00000512229 SARS2Q9NP81 518 aaKnown RBP13.6□□□□□ -0.23
PCDHA4-202ENST00000512229 RRN3Q9NYV6 651 aa13.6□□□□□ -0.23
PCDHA4-202ENST00000512229 PCDHA2Q9Y5H9 948 aa13.6□□□□□ -0.23
PCDHA4-202ENST00000512229 RPS6KL1Q9Y6S9 549 aa13.6□□□□□ -0.23
PCDHA4-202ENST00000512229 CICQ96RK0 1608 aaPredicted RBP13.6□□□□□ -0.23
PCDHA4-202ENST00000512229 MEFVO15553 781 aaPredicted RBP13.6□□□□□ -0.23
PCDHA4-202ENST00000512229 PMPCBO75439 489 aa13.6□□□□□ -0.23
PCDHA4-202ENST00000512229 SASH3O75995 380 aa13.6□□□□□ -0.23
PCDHA4-202ENST00000512229 FAM107AO95990 144 aa13.6□□□□□ -0.23
PCDHA4-202ENST00000512229 CST3P01034 146 aaPredicted RBP13.6□□□□□ -0.23
PCDHA4-202ENST00000512229 CYBBP04839 570 aa13.6□□□□□ -0.23
PCDHA4-202ENST00000512229 MARCKSL1P49006 195 aa13.6□□□□□ -0.23
PCDHA4-202ENST00000512229 CRYBB1P53674 252 aaPredicted RBP13.6□□□□□ -0.23
PCDHA4-202ENST00000512229 RPL7AP62424 266 aaKnown RBP13.6□□□□□ -0.23
PCDHA4-202ENST00000512229 RPL10AP62906 217 aaKnown RBP13.6□□□□□ -0.23
PCDHA4-202ENST00000512229 LRRC38Q5VT99 294 aa13.6□□□□□ -0.23
PCDHA4-202ENST00000512229 TMC3Q7Z5M5 1100 aa13.6□□□□□ -0.23
PCDHA4-202ENST00000512229 ETNK1Q9HBU6 452 aa13.6□□□□□ -0.23
PCDHA4-202ENST00000512229 C20orf96Q9NUD7 363 aaPredicted RBP13.6□□□□□ -0.23
PCDHA4-202ENST00000512229 GTSE1Q9NYZ3 720 aa13.6□□□□□ -0.23
PCDHA4-202ENST00000512229 ZNF112Q9UJU3 913 aa13.6□□□□□ -0.23
PCDHA4-202ENST00000512229 ZMYM2Q9UBW7 1377 aa13.6□□□□□ -0.23
PCDHA4-202ENST00000512229 H7C4K7 107 aa13.59□□□□□ -0.23
PCDHA4-202ENST00000512229 ANXA9O76027 345 aa13.59□□□□□ -0.23
PCDHA4-202ENST00000512229 LCA5LO95447 670 aa13.59□□□□□ -0.23
PCDHA4-202ENST00000512229 C4BPAP04003 597 aaKnown RBP13.59□□□□□ -0.23
PCDHA4-202ENST00000512229 FLT3LGP49771 235 aa13.59□□□□□ -0.23
PCDHA4-202ENST00000512229 CLNS1AP54105 237 aaKnown RBP13.59□□□□□ -0.23
PCDHA4-202ENST00000512229 E2F5Q15329 346 aa13.59□□□□□ -0.23
PCDHA4-202ENST00000512229 FSCBQ5H9T9 825 aa13.59□□□□□ -0.23
PCDHA4-202ENST00000512229 TSHZ1Q6ZSZ6 1077 aa13.59□□□□□ -0.23
PCDHA4-202ENST00000512229 PCDHB18PQ96TA0 734 aa13.59□□□□□ -0.23
PCDHA4-202ENST00000512229 NUF2Q9BZD4 464 aa13.59□□□□□ -0.23
PCDHA4-202ENST00000512229 PCMTD2Q9NV79 361 aa13.59□□□□□ -0.23
PCDHA4-202ENST00000512229 FGFR1OP2Q9NVK5 253 aa13.59□□□□□ -0.23
PCDHA4-202ENST00000512229 TRIM49D1C9J1S8 452 aa13.59□□□□□ -0.23
PCDHA4-202ENST00000512229 E5RI56 91 aa13.59□□□□□ -0.23
PCDHA4-202ENST00000512229 CABYRO75952 493 aa13.59□□□□□ -0.23
PCDHA4-202ENST00000512229 CCDC130P13994 396 aa13.59□□□□□ -0.23
PCDHA4-202ENST00000512229 MLH1P40692 756 aa13.59□□□□□ -0.23
PCDHA4-202ENST00000512229 SCNN1GP51170 649 aa13.59□□□□□ -0.23
PCDHA4-202ENST00000512229 SLC12A1Q13621 1099 aa13.59□□□□□ -0.23
PCDHA4-202ENST00000512229 USP10Q14694 798 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms