RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 TBC1D22AQ8WUA7 517 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 DCAKDQ8WVC6 231 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 SGCDQ92629 289 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 LPAR1Q92633 364 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 HOOK2Q96ED9 719 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 PEBP4Q96S96 227 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 CCT7Q99832 543 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 TRIM56Q9BRZ2 755 aaKnown RBP1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 CRACR2AQ9BSW2 395 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 INO80BQ9C086 356 aaPredicted RBP1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 NXF2Q9GZY0 626 aaKnown RBP1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 NACA2Q9H009 215 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 VCX3BQ9H321 246 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 SMOC2Q9H3U7 446 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 PDE11AQ9HCR9 933 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 CABP5Q9NP86 173 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 GOLGA6AQ9NYA3 693 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 GULP1Q9UBP9 304 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 SFMBT1Q9UHJ3 866 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 KCNH3Q9ULD8 1083 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 PHTF1Q9UMS5 762 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 USTQ9Y2C2 406 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 VPS37CA5D8V6 355 aaPredicted RBP1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 RNF103O00237 685 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 ARHGAP6O43182 974 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 FGBP02675 491 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 TP53P04637 393 aaPredicted RBP1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 H2AFB1P0C5Y9 115 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 H2AFB2P0C5Z0 115 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 SKIP12755 728 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 HSD3B2P26439 372 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 POLR2BP30876 1174 aaKnown RBP1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 IRX3P78415 501 aaPredicted RBP1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 LSAMPQ13449 338 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 SPCS2Q15005 226 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 CFAP157Q5JU67 520 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 KAZNQ674X7 775 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 RFWD3Q6PCD5 774 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 TPTE2Q6XPS3 522 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 HDXQ7Z353 690 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 CACNA2D4Q7Z3S7 1137 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 KIAA1328Q86T90 577 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 HS6ST3Q8IZP7 471 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 CMTR1Q8N1G2 835 aaKnown RBP1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 GPR161Q8N6U8 529 aaKnown RBP1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 RDH13Q8NBN7 331 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 EHBP1Q8NDI1 1231 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 FBXO36Q8NEA4 188 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 RNF217Q8TC41 542 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 ACTRT2Q8TDY3 377 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 SHC3Q92529 594 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 RUBCNQ92622 972 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 ZNF622Q969S3 477 aaKnown RBP eCLIP1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 CEP295NLQ96MC4 621 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 PWWP2AQ96N64 755 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 GSDMAQ96QA5 445 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 MPHOSPH8Q99549 860 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 POP1Q99575 1024 aaKnown RBP1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 MXD3Q9BW11 206 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 NUP85Q9BW27 656 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 CCDC106Q9BWC9 280 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 PALMDQ9NP74 551 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 SUFUQ9UMX1 484 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 SCML1Q9UN30 329 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 SLC8A2Q9UPR5 921 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 EXO1Q9UQ84 846 aaKnown RBP1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 DAAM1Q9Y4D1 1078 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 PCDHA11Q9Y5I1 949 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 DDX49Q9Y6V7 483 aaKnown RBP1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 IVNS1ABPQ9Y6Y0 642 aa1.75□□□□□ -2.13
TRAPPC13-211ENST00000512009 A0A1W2PQ67 120 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 GOLGA8AA7E2F4 631 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 KIF2AO00139 706 aaPredicted RBP1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 HIP1O00291 1037 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 TEX28O15482 410 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 B4GALT3O60512 393 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 MTRF1O75570 445 aaKnown RBP1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 SERPINB7O75635 380 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 CD160O95971 181 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 CCNE2O96020 404 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 PABPC4LP0CB38 370 aaKnown RBP1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 GLDCP23378 1020 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 PTPN9P43378 593 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 GMPSP49915 693 aaPredicted RBP1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 MNAT1P51948 309 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 MVDP53602 400 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 PTENP60484 403 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 CDKL1Q00532 357 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 SP2Q02086 613 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 ADGRE1Q14246 886 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 ACSBG2Q5FVE4 666 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 MANEALQ5VSG8 457 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 AFMIDQ63HM1 303 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 LMBR1LQ6UX01 489 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 Q6ZNX1 250 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 PAQR9Q6ZVX9 377 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 MSRB3Q8IXL7 192 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 USP38Q8NB14 1042 aa1.74□□□□□ -2.13
TRAPPC13-211ENST00000512009 SERBP1Q8NC51 408 aaKnown RBP eCLIP1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms