RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 CFIP05156 583 aa6.22□□□□□ -1.41
HMGB1P47-201ENST00000511281 ELANEP08246 267 aa6.22□□□□□ -1.41
HMGB1P47-201ENST00000511281 RBL1P28749 1068 aa6.22□□□□□ -1.41
HMGB1P47-201ENST00000511281 EPHA3P29320 983 aa6.22□□□□□ -1.41
HMGB1P47-201ENST00000511281 NPTX2P47972 431 aa6.22□□□□□ -1.41
HMGB1P47-201ENST00000511281 PGDP52209 483 aa6.22□□□□□ -1.41
HMGB1P47-201ENST00000511281 JAG1P78504 1218 aa6.22□□□□□ -1.41
HMGB1P47-201ENST00000511281 HSD11B2P80365 405 aa6.22□□□□□ -1.41
HMGB1P47-201ENST00000511281 ARHGAP40Q5TG30 622 aa6.22□□□□□ -1.41
HMGB1P47-201ENST00000511281 VPS53Q5VIR6 699 aa6.22□□□□□ -1.41
HMGB1P47-201ENST00000511281 ICE2Q659A1 982 aa6.22□□□□□ -1.41
HMGB1P47-201ENST00000511281 SP5Q6BEB4 398 aaPredicted RBP6.22□□□□□ -1.41
HMGB1P47-201ENST00000511281 RGS7BPQ6MZT1 257 aaPredicted RBP6.22□□□□□ -1.41
HMGB1P47-201ENST00000511281 RINT1Q6NUQ1 792 aa6.22□□□□□ -1.41
HMGB1P47-201ENST00000511281 FAM180BQ6P0A1 224 aa6.22□□□□□ -1.41
HMGB1P47-201ENST00000511281 FOXR2Q6PJQ5 311 aa6.22□□□□□ -1.41
HMGB1P47-201ENST00000511281 Q6ZSN1 163 aa6.22□□□□□ -1.41
HMGB1P47-201ENST00000511281 TBC1D1Q86TI0 1168 aaPredicted RBP6.22□□□□□ -1.41
HMGB1P47-201ENST00000511281 TRABD2AQ86V40 505 aa6.22□□□□□ -1.41
HMGB1P47-201ENST00000511281 GSPT2Q8IYD1 628 aaKnown RBP6.22□□□□□ -1.41
HMGB1P47-201ENST00000511281 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.22□□□□□ -1.41
HMGB1P47-201ENST00000511281 CPT1CQ8TCG5 803 aa6.22□□□□□ -1.41
HMGB1P47-201ENST00000511281 AFG1LQ8WV93 481 aa6.22□□□□□ -1.41
HMGB1P47-201ENST00000511281 HDAC2Q92769 488 aaKnown RBP6.22□□□□□ -1.41
HMGB1P47-201ENST00000511281 GPR20Q99678 358 aa6.22□□□□□ -1.41
HMGB1P47-201ENST00000511281 SSBP3Q9BWW4 388 aaPredicted RBP6.22□□□□□ -1.41
HMGB1P47-201ENST00000511281 EPS8L2Q9H6S3 715 aa6.22□□□□□ -1.41
HMGB1P47-201ENST00000511281 GBA2Q9HCG7 927 aaPredicted RBP6.22□□□□□ -1.41
HMGB1P47-201ENST00000511281 DUSP10Q9Y6W6 482 aa6.22□□□□□ -1.41
HMGB1P47-201ENST00000511281 AATKQ6ZMQ8 1374 aa6.21□□□□□ -1.41
HMGB1P47-201ENST00000511281 ZAR1LA6NP61 321 aa6.21□□□□□ -1.42
HMGB1P47-201ENST00000511281 PATE3B3GLJ2 98 aa6.21□□□□□ -1.42
HMGB1P47-201ENST00000511281 AGPSO00116 658 aa6.21□□□□□ -1.42
HMGB1P47-201ENST00000511281 TRIAP1O43715 76 aa6.21□□□□□ -1.42
HMGB1P47-201ENST00000511281 ZFPL1O95159 310 aa6.21□□□□□ -1.42
HMGB1P47-201ENST00000511281 PLATP00750 562 aa6.21□□□□□ -1.42
HMGB1P47-201ENST00000511281 HSP90AA1P07900 732 aaKnown RBP6.21□□□□□ -1.42
HMGB1P47-201ENST00000511281 PRKAR1BP31321 381 aa6.21□□□□□ -1.42
HMGB1P47-201ENST00000511281 KRT9P35527 623 aa6.21□□□□□ -1.42
HMGB1P47-201ENST00000511281 GATMP50440 423 aa6.21□□□□□ -1.42
HMGB1P47-201ENST00000511281 TUBP50607 506 aa6.21□□□□□ -1.42
HMGB1P47-201ENST00000511281 HHEXQ03014 270 aa6.21□□□□□ -1.42
HMGB1P47-201ENST00000511281 MAPK7Q13164 816 aa6.21□□□□□ -1.42
HMGB1P47-201ENST00000511281 ACOX1Q15067 660 aa6.21□□□□□ -1.42
HMGB1P47-201ENST00000511281 NBPF8Q3BBV2 869 aa6.21□□□□□ -1.42
HMGB1P47-201ENST00000511281 PDCD4Q53EL6 469 aaKnown RBP6.21□□□□□ -1.42
HMGB1P47-201ENST00000511281 B3GNTL1Q67FW5 361 aaPredicted RBP6.21□□□□□ -1.42
HMGB1P47-201ENST00000511281 OGFOD2Q6N063 350 aa6.21□□□□□ -1.42
HMGB1P47-201ENST00000511281 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.21□□□□□ -1.42
HMGB1P47-201ENST00000511281 DSTYKQ6XUX3 929 aa6.21□□□□□ -1.42
HMGB1P47-201ENST00000511281 ABRAQ8N0Z2 381 aa6.21□□□□□ -1.42
HMGB1P47-201ENST00000511281 TMEM132CQ8N3T6 1108 aa6.21□□□□□ -1.42
HMGB1P47-201ENST00000511281 TMEM57Q8N5G2 664 aa6.21□□□□□ -1.42
HMGB1P47-201ENST00000511281 CPT1BQ92523 772 aa6.21□□□□□ -1.42
HMGB1P47-201ENST00000511281 HIST1H2AAQ96QV6 131 aa6.21□□□□□ -1.42
HMGB1P47-201ENST00000511281 ZSWIM1Q9BR11 485 aa6.21□□□□□ -1.42
HMGB1P47-201ENST00000511281 GPR87Q9BY21 358 aa6.21□□□□□ -1.42
HMGB1P47-201ENST00000511281 INO80BQ9C086 356 aaPredicted RBP6.21□□□□□ -1.42
HMGB1P47-201ENST00000511281 ALG13Q9NP73 1137 aaKnown RBP6.21□□□□□ -1.42
HMGB1P47-201ENST00000511281 RIMKLBQ9ULI2 386 aa6.21□□□□□ -1.42
HMGB1P47-201ENST00000511281 XDHP47989 1333 aa6.21□□□□□ -1.42
HMGB1P47-201ENST00000511281 KRTAP23-1A1A580 65 aa6.2□□□□□ -1.42
HMGB1P47-201ENST00000511281 GAGE12BA1L429 117 aa6.2□□□□□ -1.42
HMGB1P47-201ENST00000511281 GAGE12HA6NDE8 117 aa6.2□□□□□ -1.42
HMGB1P47-201ENST00000511281 FAM90A20PA6NIJ5 464 aa6.2□□□□□ -1.42
HMGB1P47-201ENST00000511281 BTBD11A6QL63 1104 aa6.2□□□□□ -1.42
HMGB1P47-201ENST00000511281 CAPN14A8MX76 684 aa6.2□□□□□ -1.42
HMGB1P47-201ENST00000511281 ZSCAN9O15535 394 aaPredicted RBP6.2□□□□□ -1.42
HMGB1P47-201ENST00000511281 ERN1O75460 977 aaKnown RBP6.2□□□□□ -1.42
HMGB1P47-201ENST00000511281 LARGE1O95461 756 aa6.2□□□□□ -1.42
HMGB1P47-201ENST00000511281 HGFP14210 728 aa6.2□□□□□ -1.42
HMGB1P47-201ENST00000511281 CD6P30203 668 aa6.2□□□□□ -1.42
HMGB1P47-201ENST00000511281 MAN2A2P49641 1150 aa6.2□□□□□ -1.42
HMGB1P47-201ENST00000511281 NR1H2P55055 460 aa6.2□□□□□ -1.42
HMGB1P47-201ENST00000511281 TIRAPP58753 221 aa6.2□□□□□ -1.42
HMGB1P47-201ENST00000511281 RNASE9P60153 205 aaKnown RBP6.2□□□□□ -1.42
HMGB1P47-201ENST00000511281 TUBB3Q13509 450 aa6.2□□□□□ -1.42
HMGB1P47-201ENST00000511281 CSHL1Q14406 222 aa6.2□□□□□ -1.42
HMGB1P47-201ENST00000511281 CYP2A13Q16696 494 aa6.2□□□□□ -1.42
HMGB1P47-201ENST00000511281 BTBD16Q32M84 506 aa6.2□□□□□ -1.42
HMGB1P47-201ENST00000511281 TBC1D10BQ4KMP7 808 aaPredicted RBP6.2□□□□□ -1.42
HMGB1P47-201ENST00000511281 RBM20Q5T481 1227 aaKnown RBP6.2□□□□□ -1.42
HMGB1P47-201ENST00000511281 ARMC6Q6NXE6 501 aa6.2□□□□□ -1.42
HMGB1P47-201ENST00000511281 MSANTD2Q6P1R3 559 aa6.2□□□□□ -1.42
HMGB1P47-201ENST00000511281 GDF7Q7Z4P5 450 aa6.2□□□□□ -1.42
HMGB1P47-201ENST00000511281 TTC30AQ86WT1 665 aa6.2□□□□□ -1.42
HMGB1P47-201ENST00000511281 LRRC71Q8N4P6 559 aa6.2□□□□□ -1.42
HMGB1P47-201ENST00000511281 RFFLQ8WZ73 363 aa6.2□□□□□ -1.42
HMGB1P47-201ENST00000511281 SNX19Q92543 992 aa6.2□□□□□ -1.42
HMGB1P47-201ENST00000511281 COG8Q96MW5 612 aa6.2□□□□□ -1.42
HMGB1P47-201ENST00000511281 VN1R3Q9BXE9 311 aa6.2□□□□□ -1.42
HMGB1P47-201ENST00000511281 AGXT2Q9BYV1 514 aa6.2□□□□□ -1.42
HMGB1P47-201ENST00000511281 ELAC1Q9H777 363 aaKnown RBP6.2□□□□□ -1.42
HMGB1P47-201ENST00000511281 UNKLQ9H9P5 680 aaKnown RBP6.2□□□□□ -1.42
HMGB1P47-201ENST00000511281 NOD2Q9HC29 1040 aa6.2□□□□□ -1.42
HMGB1P47-201ENST00000511281 TMLHEQ9NVH6 421 aa6.2□□□□□ -1.42
HMGB1P47-201ENST00000511281 USP22Q9UPT9 525 aa6.2□□□□□ -1.42
HMGB1P47-201ENST00000511281 DERAQ9Y315 318 aa6.2□□□□□ -1.42
HMGB1P47-201ENST00000511281 FPGT-TNNI3KV9GXZ4 949 aa6.2□□□□□ -1.42
HMGB1P47-201ENST00000511281 NPEPPSL1A6NEC2 478 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms