RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 SBF2Q86WG5 1849 aa5.34□□□□□ -1.55
PHF3-210ENST00000509876 SPTLC1O15269 473 aa5.34□□□□□ -1.55
PHF3-210ENST00000509876 TBC1D4O60343 1298 aa5.34□□□□□ -1.55
PHF3-210ENST00000509876 APODP05090 189 aa5.34□□□□□ -1.55
PHF3-210ENST00000509876 VCLP18206 1134 aa5.34□□□□□ -1.55
PHF3-210ENST00000509876 AKT1P31749 480 aa5.34□□□□□ -1.55
PHF3-210ENST00000509876 GUCY2DQ02846 1103 aa5.34□□□□□ -1.55
PHF3-210ENST00000509876 COBLL1Q53SF7 1204 aa5.34□□□□□ -1.55
PHF3-210ENST00000509876 INTS6LQ5JSJ4 861 aaKnown RBP5.34□□□□□ -1.55
PHF3-210ENST00000509876 ZC3H18Q86VM9 953 aaKnown RBP5.34□□□□□ -1.55
PHF3-210ENST00000509876 RASSF3Q86WH2 238 aa5.34□□□□□ -1.55
PHF3-210ENST00000509876 SRRM1Q8IYB3 904 aaKnown RBP5.34□□□□□ -1.55
PHF3-210ENST00000509876 COLGALT1Q8NBJ5 622 aa5.34□□□□□ -1.55
PHF3-210ENST00000509876 HJURPQ8NCD3 748 aaPredicted RBP5.34□□□□□ -1.55
PHF3-210ENST00000509876 ABHD8Q96I13 439 aa5.34□□□□□ -1.55
PHF3-210ENST00000509876 HSFY1Q96LI6 401 aa5.34□□□□□ -1.55
PHF3-210ENST00000509876 FAM161BQ96MY7 647 aa5.34□□□□□ -1.55
PHF3-210ENST00000509876 ZIC5Q96T25 663 aa5.34□□□□□ -1.55
PHF3-210ENST00000509876 C1QTNF7Q9BXJ2 289 aa5.34□□□□□ -1.55
PHF3-210ENST00000509876 KLHL11Q9NVR0 708 aa5.34□□□□□ -1.55
PHF3-210ENST00000509876 FLRT1Q9NZU1 646 aa5.34□□□□□ -1.55
PHF3-210ENST00000509876 MID2Q9UJV3 735 aa5.34□□□□□ -1.55
PHF3-210ENST00000509876 ASB3Q9Y575 518 aa5.34□□□□□ -1.55
PHF3-210ENST00000509876 FAM237AA0A1B0GTK4 181 aa5.34□□□□□ -1.56
PHF3-210ENST00000509876 ANXA9O76027 345 aa5.34□□□□□ -1.56
PHF3-210ENST00000509876 CXCR5P32302 372 aa5.34□□□□□ -1.56
PHF3-210ENST00000509876 CASP5P51878 434 aa5.34□□□□□ -1.56
PHF3-210ENST00000509876 ENPEPQ07075 957 aa5.34□□□□□ -1.56
PHF3-210ENST00000509876 TAF1BQ53T94 588 aaPredicted RBP5.34□□□□□ -1.56
PHF3-210ENST00000509876 ARMC6Q6NXE6 501 aa5.34□□□□□ -1.56
PHF3-210ENST00000509876 FAM35AQ86V20 835 aa5.34□□□□□ -1.56
PHF3-210ENST00000509876 SLC47A2Q86VL8 602 aa5.34□□□□□ -1.56
PHF3-210ENST00000509876 ANKRD52Q8NB46 1076 aa5.34□□□□□ -1.56
PHF3-210ENST00000509876 PYROXD1Q8WU10 500 aa5.34□□□□□ -1.56
PHF3-210ENST00000509876 TFB1MQ8WVM0 346 aaKnown RBP5.34□□□□□ -1.56
PHF3-210ENST00000509876 SLC35C1Q96A29 364 aa5.34□□□□□ -1.56
PHF3-210ENST00000509876 FOPNLQ96NB1 174 aa5.34□□□□□ -1.56
PHF3-210ENST00000509876 TOX2Q96NM4 488 aa5.34□□□□□ -1.56
PHF3-210ENST00000509876 ACBD6Q9BR61 282 aa5.34□□□□□ -1.56
PHF3-210ENST00000509876 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.34□□□□□ -1.563e-16■■□□□ 12.9
PHF3-210ENST00000509876 C16orf70Q9BSU1 422 aa5.34□□□□□ -1.56
PHF3-210ENST00000509876 ULBP1Q9BZM6 244 aa5.34□□□□□ -1.56
PHF3-210ENST00000509876 AP4E1Q9UPM8 1137 aa5.34□□□□□ -1.56
PHF3-210ENST00000509876 PKP3Q9Y446 797 aa5.34□□□□□ -1.56
PHF3-210ENST00000509876 MYADML2A6NDP7 307 aa5.33□□□□□ -1.56
PHF3-210ENST00000509876 CBX4O00257 560 aa5.33□□□□□ -1.56
PHF3-210ENST00000509876 RGS16O15492 202 aaPredicted RBP5.33□□□□□ -1.56
PHF3-210ENST00000509876 DHX15O43143 795 aaKnown RBP5.33□□□□□ -1.56
PHF3-210ENST00000509876 DNAJC6O75061 913 aa5.33□□□□□ -1.56
PHF3-210ENST00000509876 ZNF131P52739 623 aa5.33□□□□□ -1.56
PHF3-210ENST00000509876 CNGA2Q16280 664 aa5.33□□□□□ -1.56
PHF3-210ENST00000509876 TTC31Q49AM3 519 aaPredicted RBP5.33□□□□□ -1.56
PHF3-210ENST00000509876 ARSHQ5FYA8 562 aa5.33□□□□□ -1.56
PHF3-210ENST00000509876 FOXR2Q6PJQ5 311 aa5.33□□□□□ -1.56
PHF3-210ENST00000509876 SYDE1Q6ZW31 735 aaPredicted RBP5.33□□□□□ -1.56
PHF3-210ENST00000509876 ANKS4BQ8N8V4 417 aa5.33□□□□□ -1.56
PHF3-210ENST00000509876 SPATA18Q8TC71 538 aa5.33□□□□□ -1.56
PHF3-210ENST00000509876 PHOSPHO2Q8TCD6 241 aa5.33□□□□□ -1.56
PHF3-210ENST00000509876 ZNF606Q8WXB4 792 aa5.33□□□□□ -1.56
PHF3-210ENST00000509876 RAPGEF5Q92565 580 aa5.33□□□□□ -1.56
PHF3-210ENST00000509876 SH3KBP1Q96B97 665 aa5.33□□□□□ -1.56
PHF3-210ENST00000509876 ZBTB10Q96DT7 871 aa5.33□□□□□ -1.56
PHF3-210ENST00000509876 TRIM54Q9BYV2 358 aa5.33□□□□□ -1.56
PHF3-210ENST00000509876 GPR63Q9BZJ6 419 aa5.33□□□□□ -1.56
PHF3-210ENST00000509876 UPF3AQ9H1J1 476 aaKnown RBP5.33□□□□□ -1.56
PHF3-210ENST00000509876 SMYD2Q9NRG4 433 aa5.33□□□□□ -1.56
PHF3-210ENST00000509876 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.33□□□□□ -1.56
PHF3-210ENST00000509876 V9GYY5 206 aaPredicted RBP5.33□□□□□ -1.56
PHF3-210ENST00000509876 NRP1O14786 923 aa5.33□□□□□ -1.56
PHF3-210ENST00000509876 IGSF6O95976 241 aa5.33□□□□□ -1.56
PHF3-210ENST00000509876 KRT14P02533 472 aa5.33□□□□□ -1.56
PHF3-210ENST00000509876 DDX6P26196 483 aaKnown RBP eCLIP5.33□□□□□ -1.567e-7■■■□□ 15.9
PHF3-210ENST00000509876 GJA8P48165 433 aa5.33□□□□□ -1.56
PHF3-210ENST00000509876 NOVP48745 357 aa5.33□□□□□ -1.56
PHF3-210ENST00000509876 GEMP55040 296 aa5.33□□□□□ -1.56
PHF3-210ENST00000509876 RBM10P98175 930 aaKnown RBP5.33□□□□□ -1.56
PHF3-210ENST00000509876 SGCGQ13326 291 aa5.33□□□□□ -1.56
PHF3-210ENST00000509876 LINC00523Q86TU6 105 aa5.33□□□□□ -1.56
PHF3-210ENST00000509876 METTL3Q86U44 580 aaKnown RBP5.33□□□□□ -1.56
PHF3-210ENST00000509876 ATP11CQ8NB49 1132 aa5.33□□□□□ -1.56
PHF3-210ENST00000509876 E2F7Q96AV8 911 aa5.33□□□□□ -1.56
PHF3-210ENST00000509876 ARHGEF26Q96DR7 871 aa5.33□□□□□ -1.56
PHF3-210ENST00000509876 SHDQ96IW2 340 aa5.33□□□□□ -1.56
PHF3-210ENST00000509876 VCPIP1Q96JH7 1222 aa5.33□□□□□ -1.56
PHF3-210ENST00000509876 ZFP42Q96MM3 310 aa5.33□□□□□ -1.56
PHF3-210ENST00000509876 SMC6Q96SB8 1091 aa5.33□□□□□ -1.56
PHF3-210ENST00000509876 DUSP16Q9BY84 665 aa5.33□□□□□ -1.56
PHF3-210ENST00000509876 SLC30A1Q9Y6M5 507 aa5.33□□□□□ -1.56
PHF3-210ENST00000509876 CLGNO14967 610 aa5.33□□□□□ -1.56
PHF3-210ENST00000509876 XPO1O14980 1071 aaKnown RBP5.33□□□□□ -1.56
PHF3-210ENST00000509876 FOSL2P15408 326 aa5.33□□□□□ -1.56
PHF3-210ENST00000509876 TAC1P20366 129 aa5.33□□□□□ -1.56
PHF3-210ENST00000509876 DUSP4Q13115 394 aa5.33□□□□□ -1.56
PHF3-210ENST00000509876 DDR2Q16832 855 aa5.33□□□□□ -1.56
PHF3-210ENST00000509876 FIGNQ5HY92 759 aa5.33□□□□□ -1.56
PHF3-210ENST00000509876 VARS2Q5ST30 1063 aaKnown RBP5.33□□□□□ -1.56
PHF3-210ENST00000509876 CNPY4Q8N129 248 aa5.33□□□□□ -1.56
PHF3-210ENST00000509876 SUDS3Q9H7L9 328 aaPredicted RBP5.33□□□□□ -1.56
PHF3-210ENST00000509876 TAF1LQ8IZX4 1826 aa5.33□□□□□ -1.56
PHF3-210ENST00000509876 ENPP3O14638 875 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms