RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 RBM5P52756 815 aaKnown RBP eCLIP18.48■□□□□ 0.55
NUP54-205ENST00000507257 AQP5P55064 265 aa18.48■□□□□ 0.55
NUP54-205ENST00000507257 MRPS5P82675 430 aaKnown RBP18.48■□□□□ 0.55
NUP54-205ENST00000507257 KDSRQ06136 332 aa18.48■□□□□ 0.55
NUP54-205ENST00000507257 STXBP5Q5T5C0 1151 aa18.48■□□□□ 0.55
NUP54-205ENST00000507257 RAPH1Q70E73 1250 aa18.48■□□□□ 0.55
NUP54-205ENST00000507257 ALDH16A1Q8IZ83 802 aa18.48■□□□□ 0.55
NUP54-205ENST00000507257 CLEC4DQ8WXI8 215 aa18.48■□□□□ 0.55
NUP54-205ENST00000507257 LZICQ8WZA0 190 aa18.48■□□□□ 0.55
NUP54-205ENST00000507257 CLPTM1LQ96KA5 538 aa18.48■□□□□ 0.55
NUP54-205ENST00000507257 ACAP3Q96P50 834 aa18.48■□□□□ 0.55
NUP54-205ENST00000507257 CSRNP1Q96S65 589 aa18.48■□□□□ 0.55
NUP54-205ENST00000507257 CGRRF1Q99675 332 aa18.48■□□□□ 0.55
NUP54-205ENST00000507257 DHX33Q9H6R0 707 aaKnown RBP18.48■□□□□ 0.55
NUP54-205ENST00000507257 NUB1Q9Y5A7 615 aa18.48■□□□□ 0.55
NUP54-205ENST00000507257 MCF2LO15068 1137 aa18.47■□□□□ 0.55
NUP54-205ENST00000507257 DGAT1O75907 488 aa18.47■□□□□ 0.55
NUP54-205ENST00000507257 CCNE2O96020 404 aa18.47■□□□□ 0.55
NUP54-205ENST00000507257 LDHAP00338 332 aaKnown RBP18.47■□□□□ 0.55
NUP54-205ENST00000507257 RGS2P41220 211 aa18.47■□□□□ 0.55
NUP54-205ENST00000507257 SH2D4BQ5SQS7 431 aa18.47■□□□□ 0.55
NUP54-205ENST00000507257 RFX8Q6ZV50 586 aa18.47■□□□□ 0.55
NUP54-205ENST00000507257 NUDCD3Q8IVD9 361 aa18.47■□□□□ 0.55
NUP54-205ENST00000507257 UNC45BQ8IWX7 931 aa18.47■□□□□ 0.55
NUP54-205ENST00000507257 PTTG2Q9NZH5 202 aa18.47■□□□□ 0.55
NUP54-205ENST00000507257 TCEAL9Q9UHQ7 104 aa18.47■□□□□ 0.55
NUP54-205ENST00000507257 ITGA11Q9UKX5 1188 aa18.47■□□□□ 0.55
NUP54-205ENST00000507257 TTLL3Q9Y4R7 772 aa18.47■□□□□ 0.55
NUP54-205ENST00000507257 GMEB1Q9Y692 573 aa18.47■□□□□ 0.55
NUP54-205ENST00000507257 PTPRJQ12913 1337 aa18.47■□□□□ 0.55
NUP54-205ENST00000507257 PRR5-ARHGAP8B1AHC4 643 aa18.47■□□□□ 0.55
NUP54-205ENST00000507257 RFPL1O75677 317 aa18.47■□□□□ 0.55
NUP54-205ENST00000507257 HARSP12081 509 aaKnown RBP18.47■□□□□ 0.55
NUP54-205ENST00000507257 MYL4P12829 197 aa18.47■□□□□ 0.55
NUP54-205ENST00000507257 VAV1P15498 845 aa18.47■□□□□ 0.55
NUP54-205ENST00000507257 CRHR1P34998 444 aa18.47■□□□□ 0.55
NUP54-205ENST00000507257 LIG4P49917 911 aa18.47■□□□□ 0.55
NUP54-205ENST00000507257 ARHGAP8P85298 464 aa18.47■□□□□ 0.55
NUP54-205ENST00000507257 SLFN12LQ6IEE8 588 aa18.47■□□□□ 0.55
NUP54-205ENST00000507257 FAM96AQ9H5X1 160 aa18.47■□□□□ 0.55
NUP54-205ENST00000507257 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.47■□□□□ 0.55
NUP54-205ENST00000507257 THAP1Q9NVV9 213 aa18.47■□□□□ 0.55
NUP54-205ENST00000507257 CIDEBQ9UHD4 219 aa18.47■□□□□ 0.55
NUP54-205ENST00000507257 AGO2Q9UKV8 859 aaKnown RBP18.47■□□□□ 0.55
NUP54-205ENST00000507257 CCPG1Q9ULG6 757 aa18.47■□□□□ 0.55
NUP54-205ENST00000507257 THSD7AQ9UPZ6 1657 aa18.46■□□□□ 0.55
NUP54-205ENST00000507257 USP1O94782 785 aa18.46■□□□□ 0.55
NUP54-205ENST00000507257 STBD1O95210 358 aa18.46■□□□□ 0.55
NUP54-205ENST00000507257 BPGMP07738 259 aa18.46■□□□□ 0.55
NUP54-205ENST00000507257 NPR1P16066 1061 aa18.46■□□□□ 0.55
NUP54-205ENST00000507257 VCLP18206 1134 aa18.46■□□□□ 0.55
NUP54-205ENST00000507257 AP3M2P53677 418 aa18.46■□□□□ 0.55
NUP54-205ENST00000507257 WNT7BP56706 349 aa18.46■□□□□ 0.55
NUP54-205ENST00000507257 NLRP11P59045 1033 aaKnown RBP18.46■□□□□ 0.55
NUP54-205ENST00000507257 EIF3EP60228 445 aaKnown RBP18.46■□□□□ 0.55
NUP54-205ENST00000507257 YWHAGP61981 247 aaKnown RBP eCLIP18.46■□□□□ 0.55
NUP54-205ENST00000507257 BASP1P80723 227 aaKnown RBP18.46■□□□□ 0.55
NUP54-205ENST00000507257 CNTN2Q02246 1040 aa18.46■□□□□ 0.55
NUP54-205ENST00000507257 MSLNQ13421 630 aaPredicted RBP18.46■□□□□ 0.55
NUP54-205ENST00000507257 CHI3L2Q15782 390 aa18.46■□□□□ 0.55
NUP54-205ENST00000507257 ANKRD20A4Q4UJ75 823 aa18.46■□□□□ 0.55
NUP54-205ENST00000507257 SFT2D3Q587I9 215 aa18.46■□□□□ 0.55
NUP54-205ENST00000507257 CFAP157Q5JU67 520 aa18.46■□□□□ 0.55
NUP54-205ENST00000507257 LMBRD2Q68DH5 695 aaPredicted RBP18.46■□□□□ 0.55
NUP54-205ENST00000507257 SPATA24Q86W54 205 aa18.46■□□□□ 0.55
NUP54-205ENST00000507257 CMASQ8NFW8 434 aaPredicted RBP18.46■□□□□ 0.55
NUP54-205ENST00000507257 ACSF2Q96CM8 615 aaPredicted RBP18.46■□□□□ 0.55
NUP54-205ENST00000507257 LRRC39Q96DD0 335 aa18.46■□□□□ 0.55
NUP54-205ENST00000507257 SCN9AQ15858 1988 aa18.46■□□□□ 0.55
NUP54-205ENST00000507257 A0A0B4J269 797 aa18.45■□□□□ 0.54
NUP54-205ENST00000507257 IRF6O14896 467 aa18.45■□□□□ 0.54
NUP54-205ENST00000507257 LRCH4O75427 683 aa18.45■□□□□ 0.54
NUP54-205ENST00000507257 KRT38O76015 456 aa18.45■□□□□ 0.54
NUP54-205ENST00000507257 MAGEA6P43360 314 aa18.45■□□□□ 0.54
NUP54-205ENST00000507257 TUBB3Q13509 450 aa18.45■□□□□ 0.54
NUP54-205ENST00000507257 R3HDM1Q15032 1099 aaKnown RBP18.45■□□□□ 0.54
NUP54-205ENST00000507257 CES4AQ5XG92 561 aa18.45■□□□□ 0.54
NUP54-205ENST00000507257 CC2D2BQ6DHV5 1058 aa18.45■□□□□ 0.54
NUP54-205ENST00000507257 SYTL5Q8TDW5 730 aaPredicted RBP18.45■□□□□ 0.54
NUP54-205ENST00000507257 ACTRT2Q8TDY3 377 aa18.45■□□□□ 0.54
NUP54-205ENST00000507257 IRGQQ8WZA9 623 aa18.45■□□□□ 0.54
NUP54-205ENST00000507257 DGCR14Q96DF8 476 aaKnown RBP18.45■□□□□ 0.54
NUP54-205ENST00000507257 HIC2Q96JB3 615 aa18.45■□□□□ 0.54
NUP54-205ENST00000507257 FAM84AQ96KN4 292 aa18.45■□□□□ 0.54
NUP54-205ENST00000507257 CEP170P1Q96L14 293 aa18.45■□□□□ 0.54
NUP54-205ENST00000507257 ZCWPW1Q9H0M4 648 aa18.45■□□□□ 0.54
NUP54-205ENST00000507257 SAE1Q9UBE0 346 aaPredicted RBP18.45■□□□□ 0.54
NUP54-205ENST00000507257 SLC9A2Q9UBY0 812 aa18.45■□□□□ 0.54
NUP54-205ENST00000507257 ASLP04424 464 aa18.45■□□□□ 0.54
NUP54-205ENST00000507257 PYGLP06737 847 aa18.45■□□□□ 0.54
NUP54-205ENST00000507257 RBP3P10745 1247 aa18.45■□□□□ 0.54
NUP54-205ENST00000507257 ALDH1B1P30837 517 aa18.45■□□□□ 0.54
NUP54-205ENST00000507257 L1CAMP32004 1257 aa18.45■□□□□ 0.54
NUP54-205ENST00000507257 GRIA2P42262 883 aa18.45■□□□□ 0.54
NUP54-205ENST00000507257 CHN2P52757 468 aa18.45■□□□□ 0.54
NUP54-205ENST00000507257 DYNLT1P63172 113 aa18.45■□□□□ 0.54
NUP54-205ENST00000507257 PDE1BQ01064 536 aa18.45■□□□□ 0.54
NUP54-205ENST00000507257 ACAP1Q15027 740 aa18.45■□□□□ 0.54
NUP54-205ENST00000507257 TMEM259Q4ZIN3 620 aa18.45■□□□□ 0.54
NUP54-205ENST00000507257 RABGAP1LQ5R372 815 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms