RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 MED7O43513 233 aa17.59■□□□□ 0.41
SNCA-209ENST00000506244 ZDHHC11BP0C7U3 371 aa17.59■□□□□ 0.41
SNCA-209ENST00000506244 CDK11BP21127 795 aaKnown RBP17.59■□□□□ 0.41
SNCA-209ENST00000506244 CLCN5P51795 746 aa17.59■□□□□ 0.41
SNCA-209ENST00000506244 KIF11P52732 1056 aa17.59■□□□□ 0.41
SNCA-209ENST00000506244 SLC7A9P82251 487 aa17.59■□□□□ 0.41
SNCA-209ENST00000506244 CNGA2Q16280 664 aa17.59■□□□□ 0.41
SNCA-209ENST00000506244 MEA1Q16626 185 aa17.59■□□□□ 0.41
SNCA-209ENST00000506244 GPRIN1Q7Z2K8 1008 aa17.59■□□□□ 0.41
SNCA-209ENST00000506244 CCDC186Q7Z3E2 898 aa17.59■□□□□ 0.41
SNCA-209ENST00000506244 TADA2BQ86TJ2 420 aa17.59■□□□□ 0.41
SNCA-209ENST00000506244 PIGZQ86VD9 579 aa17.59■□□□□ 0.41
SNCA-209ENST00000506244 TTC30AQ86WT1 665 aa17.59■□□□□ 0.41
SNCA-209ENST00000506244 ARHGAP18Q8N392 663 aa17.59■□□□□ 0.41
SNCA-209ENST00000506244 KIAA1958Q8N8K9 716 aa17.59■□□□□ 0.41
SNCA-209ENST00000506244 CDK5RAP1Q96SZ6 601 aaKnown RBP17.59■□□□□ 0.41
SNCA-209ENST00000506244 NACA2Q9H009 215 aa17.59■□□□□ 0.41
SNCA-209ENST00000506244 LRRC4Q9HBW1 653 aa17.59■□□□□ 0.41
SNCA-209ENST00000506244 CCL26Q9Y258 94 aa17.59■□□□□ 0.41
SNCA-209ENST00000506244 MRPS17Q9Y2R5 130 aaKnown RBP17.59■□□□□ 0.41
SNCA-209ENST00000506244 TRIOO75962 3097 aa17.58■□□□□ 0.4
SNCA-209ENST00000506244 M0QYV0 167 aa17.58■□□□□ 0.4
SNCA-209ENST00000506244 STK25O00506 426 aa17.58■□□□□ 0.4
SNCA-209ENST00000506244 MAN2B1O00754 1011 aa17.58■□□□□ 0.4
SNCA-209ENST00000506244 CYP26A1O43174 497 aa17.58■□□□□ 0.4
SNCA-209ENST00000506244 PDGFBP01127 241 aaPredicted RBP17.58■□□□□ 0.4
SNCA-209ENST00000506244 MBL2P11226 248 aaPredicted RBP17.58■□□□□ 0.4
SNCA-209ENST00000506244 GLULP15104 373 aa17.58■□□□□ 0.4
SNCA-209ENST00000506244 BRD2P25440 801 aaKnown RBP17.58■□□□□ 0.4
SNCA-209ENST00000506244 GNA15P30679 374 aa17.58■□□□□ 0.4
SNCA-209ENST00000506244 PLA2G4AP47712 749 aa17.58■□□□□ 0.4
SNCA-209ENST00000506244 MLLT6P55198 1093 aaPredicted RBP17.58■□□□□ 0.4
SNCA-209ENST00000506244 STARD6P59095 220 aa17.58■□□□□ 0.4
SNCA-209ENST00000506244 PDE4CQ08493 712 aa17.58■□□□□ 0.4
SNCA-209ENST00000506244 MTF1Q14872 753 aa17.58■□□□□ 0.4
SNCA-209ENST00000506244 PDGFRLQ15198 375 aa17.58■□□□□ 0.4
SNCA-209ENST00000506244 ZNF77Q15935 545 aa17.58■□□□□ 0.4
SNCA-209ENST00000506244 ARHGAP44Q17R89 818 aa17.58■□□□□ 0.4
SNCA-209ENST00000506244 ASTLQ6HA08 431 aaPredicted RBP17.58■□□□□ 0.4
SNCA-209ENST00000506244 TPRG1Q6ZUI0 275 aa17.58■□□□□ 0.4
SNCA-209ENST00000506244 SH3RF2Q8TEC5 729 aa17.58■□□□□ 0.4
SNCA-209ENST00000506244 SHC3Q92529 594 aa17.58■□□□□ 0.4
SNCA-209ENST00000506244 SLC22A12Q96S37 553 aa17.58■□□□□ 0.4
SNCA-209ENST00000506244 CYP2S1Q96SQ9 504 aa17.58■□□□□ 0.4
SNCA-209ENST00000506244 DAAM1Q9Y4D1 1078 aa17.58■□□□□ 0.4
SNCA-209ENST00000506244 COL4A2P08572 1712 aa17.58■□□□□ 0.4
SNCA-209ENST00000506244 TICRRQ7Z2Z1 1910 aa17.57■□□□□ 0.4
SNCA-209ENST00000506244 ZDBF2Q9HCK1 2354 aa17.57■□□□□ 0.4
SNCA-209ENST00000506244 SYCE3A1L190 88 aa17.57■□□□□ 0.4
SNCA-209ENST00000506244 ARNTLO00327 626 aa17.57■□□□□ 0.4
SNCA-209ENST00000506244 TLR5O60602 858 aa17.57■□□□□ 0.4
SNCA-209ENST00000506244 CAVIN2O95810 425 aa17.57■□□□□ 0.4
SNCA-209ENST00000506244 ZNF18P17022 549 aa17.57■□□□□ 0.4
SNCA-209ENST00000506244 AOC1P19801 751 aa17.57■□□□□ 0.4
SNCA-209ENST00000506244 USP8P40818 1118 aa17.57■□□□□ 0.4
SNCA-209ENST00000506244 ZNF165P49910 485 aa17.57■□□□□ 0.4
SNCA-209ENST00000506244 NUBP1P53384 320 aa17.57■□□□□ 0.4
SNCA-209ENST00000506244 COPB1P53618 953 aaKnown RBP17.57■□□□□ 0.4
SNCA-209ENST00000506244 RAB41Q5JT25 222 aa17.57■□□□□ 0.4
SNCA-209ENST00000506244 CWF19L1Q69YN2 538 aaKnown RBP17.57■□□□□ 0.4
SNCA-209ENST00000506244 GJB7Q6PEY0 223 aa17.57■□□□□ 0.4
SNCA-209ENST00000506244 ZNF852Q6ZMS4 543 aa17.57■□□□□ 0.4
SNCA-209ENST00000506244 GPIHBP1Q8IV16 184 aa17.57■□□□□ 0.4
SNCA-209ENST00000506244 SIX6OS1Q8N1H7 587 aa17.57■□□□□ 0.4
SNCA-209ENST00000506244 TFAP2BQ92481 460 aa17.57■□□□□ 0.4
SNCA-209ENST00000506244 PRRX2Q99811 253 aa17.57■□□□□ 0.4
SNCA-209ENST00000506244 LSM14BQ9BX40 385 aaKnown RBP17.57■□□□□ 0.4
SNCA-209ENST00000506244 KCNH6Q9H252 994 aa17.57■□□□□ 0.4
SNCA-209ENST00000506244 VPS16Q9H269 839 aa17.57■□□□□ 0.4
SNCA-209ENST00000506244 C8orf33Q9H7E9 229 aaPredicted RBP17.57■□□□□ 0.4
SNCA-209ENST00000506244 SIX2Q9NPC8 291 aa17.57■□□□□ 0.4
SNCA-209ENST00000506244 CYLDQ9NQC7 956 aa17.57■□□□□ 0.4
SNCA-209ENST00000506244 HEBP1Q9NRV9 189 aa17.57■□□□□ 0.4
SNCA-209ENST00000506244 LIMA1Q9UHB6 759 aaKnown RBP17.57■□□□□ 0.4
SNCA-209ENST00000506244 CHORDC1Q9UHD1 332 aaPredicted RBP17.57■□□□□ 0.4
SNCA-209ENST00000506244 DNAJC12Q9UKB3 198 aa17.57■□□□□ 0.4
SNCA-209ENST00000506244 CPQQ9Y646 472 aa17.57■□□□□ 0.4
SNCA-209ENST00000506244 USP3Q9Y6I4 520 aa17.57■□□□□ 0.4
SNCA-209ENST00000506244 PIAS3Q9Y6X2 628 aa17.57■□□□□ 0.4
SNCA-209ENST00000506244 KANSL1LA0AUZ9 987 aa17.56■□□□□ 0.4
SNCA-209ENST00000506244 LGALS16A8MUM7 142 aa17.56■□□□□ 0.4
SNCA-209ENST00000506244 BECN2A8MW95 431 aa17.56■□□□□ 0.4
SNCA-209ENST00000506244 RNF225M0QZC1 329 aaPredicted RBP17.56■□□□□ 0.4
SNCA-209ENST00000506244 COCHO43405 550 aa17.56■□□□□ 0.4
SNCA-209ENST00000506244 THAP12O43422 761 aa17.56■□□□□ 0.4
SNCA-209ENST00000506244 RALAP11233 206 aa17.56■□□□□ 0.4
SNCA-209ENST00000506244 IFNAR2P48551 515 aa17.56■□□□□ 0.4
SNCA-209ENST00000506244 TKTL1P51854 596 aa17.56■□□□□ 0.4
SNCA-209ENST00000506244 KPNA1P52294 538 aaPredicted RBP17.56■□□□□ 0.4
SNCA-209ENST00000506244 TPM4P67936 248 aa17.56■□□□□ 0.4
SNCA-209ENST00000506244 GOLGA8FQ08AF8 430 aa17.56■□□□□ 0.4
SNCA-209ENST00000506244 GOLGA8DPQ0D2H9 430 aa17.56■□□□□ 0.4
SNCA-209ENST00000506244 NCAPHQ15003 741 aa17.56■□□□□ 0.4
SNCA-209ENST00000506244 PKDCCQ504Y2 493 aa17.56■□□□□ 0.4
SNCA-209ENST00000506244 TTC16Q8NEE8 873 aa17.56■□□□□ 0.4
SNCA-209ENST00000506244 OSCP1Q8WVF1 389 aa17.56■□□□□ 0.4
SNCA-209ENST00000506244 KCTD13Q8WZ19 329 aa17.56■□□□□ 0.4
SNCA-209ENST00000506244 ATP2A3Q93084 1043 aa17.56■□□□□ 0.4
SNCA-209ENST00000506244 LRRC3BQ96PB8 259 aa17.56■□□□□ 0.4
SNCA-209ENST00000506244 DDX23Q9BUQ8 820 aaKnown RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms