RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 PLLPQ9Y342 182 aa12.39□□□□□ -0.43
UBE3D-206ENST00000505226 SIP14410 1827 aa12.39□□□□□ -0.43
UBE3D-206ENST00000505226 HMX2A2RU54 273 aa12.39□□□□□ -0.43
UBE3D-206ENST00000505226 H0YCG3 227 aa12.39□□□□□ -0.43
UBE3D-206ENST00000505226 KLF11O14901 512 aa12.39□□□□□ -0.43
UBE3D-206ENST00000505226 USP1O94782 785 aa12.39□□□□□ -0.43
UBE3D-206ENST00000505226 LDHAP00338 332 aaKnown RBP12.39□□□□□ -0.43
UBE3D-206ENST00000505226 SUPT20HL2P0C7V6 817 aa12.39□□□□□ -0.43
UBE3D-206ENST00000505226 PSMC1P62191 440 aaKnown RBP12.39□□□□□ -0.43
UBE3D-206ENST00000505226 TAP1Q03518 808 aa12.39□□□□□ -0.43
UBE3D-206ENST00000505226 CAPSQ13938 189 aa12.39□□□□□ -0.43
UBE3D-206ENST00000505226 SUPT20HL1Q3ZLR7 823 aa12.39□□□□□ -0.43
UBE3D-206ENST00000505226 TEX44Q53QW1 395 aa12.39□□□□□ -0.43
UBE3D-206ENST00000505226 FAXCQ5TGI0 409 aa12.39□□□□□ -0.43
UBE3D-206ENST00000505226 RIPOR1Q6ZS17 1223 aa12.39□□□□□ -0.43
UBE3D-206ENST00000505226 CYP4V2Q6ZWL3 525 aaPredicted RBP12.39□□□□□ -0.43
UBE3D-206ENST00000505226 SLC25A41Q8N5S1 370 aa12.39□□□□□ -0.43
UBE3D-206ENST00000505226 PPM1NQ8N819 430 aa12.39□□□□□ -0.43
UBE3D-206ENST00000505226 TTC13Q8NBP0 860 aa12.39□□□□□ -0.43
UBE3D-206ENST00000505226 CALN1Q9BXU9 219 aa12.39□□□□□ -0.43
UBE3D-206ENST00000505226 ZNF518BQ9C0D4 1074 aa12.39□□□□□ -0.43
UBE3D-206ENST00000505226 NIF3L1Q9GZT8 377 aa12.39□□□□□ -0.43
UBE3D-206ENST00000505226 XYLT2Q9H1B5 865 aa12.39□□□□□ -0.43
UBE3D-206ENST00000505226 ZNF212Q9UDV6 495 aa12.39□□□□□ -0.43
UBE3D-206ENST00000505226 SLC7A8Q9UHI5 535 aa12.39□□□□□ -0.43
UBE3D-206ENST00000505226 SCOCQ9UIL1 159 aa12.39□□□□□ -0.43
UBE3D-206ENST00000505226 MAP3K6O95382 1288 aa12.38□□□□□ -0.43
UBE3D-206ENST00000505226 KRT7P08729 469 aa12.38□□□□□ -0.43
UBE3D-206ENST00000505226 CDH8P55286 799 aa12.38□□□□□ -0.43
UBE3D-206ENST00000505226 SARNPP82979 210 aaKnown RBP12.38□□□□□ -0.43
UBE3D-206ENST00000505226 BIRC2Q13490 618 aa12.38□□□□□ -0.43
UBE3D-206ENST00000505226 FAM83AQ86UY5 434 aa12.38□□□□□ -0.43
UBE3D-206ENST00000505226 XYLT1Q86Y38 959 aa12.38□□□□□ -0.43
UBE3D-206ENST00000505226 BRSK2Q8IWQ3 736 aa12.38□□□□□ -0.43
UBE3D-206ENST00000505226 THNSL1Q8IYQ7 743 aa12.38□□□□□ -0.43
UBE3D-206ENST00000505226 EBF4Q9BQW3 602 aa12.38□□□□□ -0.43
UBE3D-206ENST00000505226 PPARGC1AQ9UBK2 798 aaKnown RBP12.38□□□□□ -0.43
UBE3D-206ENST00000505226 PPM1HQ9ULR3 514 aa12.38□□□□□ -0.43
UBE3D-206ENST00000505226 WNT10BO00744 389 aa12.38□□□□□ -0.43
UBE3D-206ENST00000505226 COPEO14579 308 aa12.38□□□□□ -0.43
UBE3D-206ENST00000505226 NDC80O14777 642 aa12.38□□□□□ -0.43
UBE3D-206ENST00000505226 MAP3K7O43318 606 aa12.38□□□□□ -0.43
UBE3D-206ENST00000505226 MAGEC1O60732 1142 aa12.38□□□□□ -0.43
UBE3D-206ENST00000505226 SNUPNO95149 360 aaKnown RBP12.38□□□□□ -0.43
UBE3D-206ENST00000505226 ZCCHC18P0CG32 403 aa12.38□□□□□ -0.43
UBE3D-206ENST00000505226 ANPEPP15144 967 aa12.38□□□□□ -0.43
UBE3D-206ENST00000505226 YWHAZP63104 245 aaKnown RBP12.38□□□□□ -0.43
UBE3D-206ENST00000505226 TRNP1Q6NT89 227 aa12.38□□□□□ -0.43
UBE3D-206ENST00000505226 CTAGE3PQ8IX95 158 aa12.38□□□□□ -0.43
UBE3D-206ENST00000505226 ZCWPW1Q9H0M4 648 aa12.38□□□□□ -0.43
UBE3D-206ENST00000505226 USP29Q9HBJ7 922 aa12.38□□□□□ -0.43
UBE3D-206ENST00000505226 PPME1Q9Y570 386 aa12.38□□□□□ -0.43
UBE3D-206ENST00000505226 MAFBQ9Y5Q3 323 aaPredicted RBP12.38□□□□□ -0.43
UBE3D-206ENST00000505226 IKBKGQ9Y6K9 419 aa12.38□□□□□ -0.43
UBE3D-206ENST00000505226 MAFGO15525 162 aa12.38□□□□□ -0.43
UBE3D-206ENST00000505226 YY1P25490 414 aa12.38□□□□□ -0.43
UBE3D-206ENST00000505226 UBAP2LQ14157 1087 aaKnown RBP12.38□□□□□ -0.43
UBE3D-206ENST00000505226 CHI3L2Q15782 390 aa12.38□□□□□ -0.43
UBE3D-206ENST00000505226 FKBP1CQ5VVH2 108 aa12.38□□□□□ -0.43
UBE3D-206ENST00000505226 DARS2Q6PI48 645 aaKnown RBP12.38□□□□□ -0.43
UBE3D-206ENST00000505226 ZCCHC23Q6ZST2 131 aa12.38□□□□□ -0.43
UBE3D-206ENST00000505226 CAND1Q86VP6 1230 aaKnown RBP12.38□□□□□ -0.43
UBE3D-206ENST00000505226 SLC26A11Q86WA9 606 aa12.38□□□□□ -0.43
UBE3D-206ENST00000505226 MYLK4Q86YV6 388 aaPredicted RBP12.38□□□□□ -0.43
UBE3D-206ENST00000505226 TMPRSS6Q8IU80 811 aa12.38□□□□□ -0.43
UBE3D-206ENST00000505226 WDR49Q8IV35 697 aa12.38□□□□□ -0.43
UBE3D-206ENST00000505226 ULK2Q8IYT8 1036 aa12.38□□□□□ -0.43
UBE3D-206ENST00000505226 THTPAQ9BU02 230 aa12.38□□□□□ -0.43
UBE3D-206ENST00000505226 CCDC106Q9BWC9 280 aa12.38□□□□□ -0.43
UBE3D-206ENST00000505226 VCXQ9H320 206 aa12.38□□□□□ -0.43
UBE3D-206ENST00000505226 ZNF277Q9NRM2 450 aaPredicted RBP12.38□□□□□ -0.43
UBE3D-206ENST00000505226 DDX43Q9NXZ2 648 aaKnown RBP12.38□□□□□ -0.43
UBE3D-206ENST00000505226 KCNK4Q9NYG8 393 aa12.38□□□□□ -0.43
UBE3D-206ENST00000505226 HMGXB4Q9UGU5 601 aa12.38□□□□□ -0.43
UBE3D-206ENST00000505226 PSME4Q14997 1843 aa12.38□□□□□ -0.43
UBE3D-206ENST00000505226 COL11A1P12107 1806 aaPredicted RBP12.37□□□□□ -0.43
UBE3D-206ENST00000505226 A8MXQ7 604 aa12.37□□□□□ -0.43
UBE3D-206ENST00000505226 PRR5-ARHGAP8B1AHC4 643 aa12.37□□□□□ -0.43
UBE3D-206ENST00000505226 SPATA31C2B4DYI2 1134 aa12.37□□□□□ -0.43
UBE3D-206ENST00000505226 TRUB2O95900 331 aaKnown RBP12.37□□□□□ -0.43
UBE3D-206ENST00000505226 EGFRP00533 1210 aa12.37□□□□□ -0.43
UBE3D-206ENST00000505226 OATP04181 439 aa12.37□□□□□ -0.43
UBE3D-206ENST00000505226 TSHRP16473 764 aa12.37□□□□□ -0.43
UBE3D-206ENST00000505226 AQP5P55064 265 aa12.37□□□□□ -0.43
UBE3D-206ENST00000505226 ARHGAP8P85298 464 aa12.37□□□□□ -0.43
UBE3D-206ENST00000505226 TMPRSS15P98073 1019 aa12.37□□□□□ -0.43
UBE3D-206ENST00000505226 ROR2Q01974 943 aaKnown RBP12.37□□□□□ -0.43
UBE3D-206ENST00000505226 RNF111Q6ZNA4 994 aa12.37□□□□□ -0.43
UBE3D-206ENST00000505226 SCUBE1Q8IWY4 988 aa12.37□□□□□ -0.43
UBE3D-206ENST00000505226 REPS2Q8NFH8 660 aa12.37□□□□□ -0.43
UBE3D-206ENST00000505226 CCDC110Q8TBZ0 833 aa12.37□□□□□ -0.43
UBE3D-206ENST00000505226 KCNN1Q92952 543 aa12.37□□□□□ -0.43
UBE3D-206ENST00000505226 TEPSINQ96N21 525 aa12.37□□□□□ -0.43
UBE3D-206ENST00000505226 TWNKQ96RR1 684 aa12.37□□□□□ -0.43
UBE3D-206ENST00000505226 ASCC2Q9H1I8 757 aaPredicted RBP12.37□□□□□ -0.43
UBE3D-206ENST00000505226 POPDC2Q9HBU9 364 aa12.37□□□□□ -0.43
UBE3D-206ENST00000505226 SIRPGQ9P1W8 387 aa12.37□□□□□ -0.43
UBE3D-206ENST00000505226 NXF1Q9UBU9 619 aaKnown RBP12.37□□□□□ -0.43
UBE3D-206ENST00000505226 USP18Q9UMW8 372 aa12.37□□□□□ -0.43
UBE3D-206ENST00000505226 MGAMO43451 1857 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms