RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 VCAM1P19320 739 aa4.83□□□□□ -1.64
SMC4-227ENST00000497984 DIO1P49895 249 aa4.83□□□□□ -1.64
SMC4-227ENST00000497984 COPB1P53618 953 aaKnown RBP4.83□□□□□ -1.64
SMC4-227ENST00000497984 BCAT1P54687 386 aa4.83□□□□□ -1.64
SMC4-227ENST00000497984 SUMO2P61956 95 aaKnown RBP4.83□□□□□ -1.64
SMC4-227ENST00000497984 TMTC4Q5T4D3 741 aa4.83□□□□□ -1.64
SMC4-227ENST00000497984 LMBRD2Q68DH5 695 aaPredicted RBP4.83□□□□□ -1.64
SMC4-227ENST00000497984 KIAA1161Q6NSJ0 714 aa4.83□□□□□ -1.64
SMC4-227ENST00000497984 ZBTB46Q86UZ6 589 aa4.83□□□□□ -1.64
SMC4-227ENST00000497984 GAR1Q9NY12 217 aaKnown RBP4.83□□□□□ -1.64
SMC4-227ENST00000497984 PI4KBQ9UBF8 816 aa4.83□□□□□ -1.64
SMC4-227ENST00000497984 DRG1Q9Y295 367 aaKnown RBP4.83□□□□□ -1.64
SMC4-227ENST00000497984 NOTCH4Q99466 2003 aa4.83□□□□□ -1.64
SMC4-227ENST00000497984 TMEM233B4DJY2 109 aa4.82□□□□□ -1.64
SMC4-227ENST00000497984 M0R3H8 397 aa4.82□□□□□ -1.64
SMC4-227ENST00000497984 PSMD9O00233 223 aa4.82□□□□□ -1.64
SMC4-227ENST00000497984 BTN3A1O00481 513 aa4.82□□□□□ -1.64
SMC4-227ENST00000497984 RNF8O76064 485 aa4.82□□□□□ -1.64
SMC4-227ENST00000497984 HTR6P50406 440 aa4.82□□□□□ -1.64
SMC4-227ENST00000497984 ID2Q02363 134 aa4.82□□□□□ -1.64
SMC4-227ENST00000497984 CCNIQ14094 377 aa4.82□□□□□ -1.64
SMC4-227ENST00000497984 ZNF267Q14586 743 aaPredicted RBP4.82□□□□□ -1.64
SMC4-227ENST00000497984 BRDTQ58F21 947 aaPredicted RBP4.82□□□□□ -1.64
SMC4-227ENST00000497984 ZNF783Q6ZMS7 281 aa4.82□□□□□ -1.64
SMC4-227ENST00000497984 ZNF548Q8NEK5 533 aaPredicted RBP4.82□□□□□ -1.64
SMC4-227ENST00000497984 RAPGEF4Q8WZA2 1011 aa4.82□□□□□ -1.64
SMC4-227ENST00000497984 NT5C1BQ96P26 610 aa4.82□□□□□ -1.64
SMC4-227ENST00000497984 SMURF2Q9HAU4 748 aa4.82□□□□□ -1.64
SMC4-227ENST00000497984 SPRY2O43597 315 aa4.81□□□□□ -1.64
SMC4-227ENST00000497984 PF4V1P10720 104 aa4.81□□□□□ -1.64
SMC4-227ENST00000497984 PSG1P11464 419 aa4.81□□□□□ -1.64
SMC4-227ENST00000497984 TMEM65Q6PI78 240 aa4.81□□□□□ -1.64
SMC4-227ENST00000497984 RAB11FIP4Q86YS3 637 aa4.81□□□□□ -1.64
SMC4-227ENST00000497984 MAFAQ8NHW3 353 aaPredicted RBP4.81□□□□□ -1.64
SMC4-227ENST00000497984 DIS3LQ8TF46 1054 aaKnown RBP4.81□□□□□ -1.64
SMC4-227ENST00000497984 LYZL4Q96KX0 146 aa4.81□□□□□ -1.64
SMC4-227ENST00000497984 CAMK1GQ96NX5 476 aa4.81□□□□□ -1.64
SMC4-227ENST00000497984 POT1Q9NUX5 634 aa4.81□□□□□ -1.64
SMC4-227ENST00000497984 WWOXQ9NZC7 414 aa4.81□□□□□ -1.64
SMC4-227ENST00000497984 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.81□□□□□ -1.64
SMC4-227ENST00000497984 GABBR1Q9UBS5 961 aa4.81□□□□□ -1.64
SMC4-227ENST00000497984 FAM90A8PA6NJQ4 464 aa4.8□□□□□ -1.64
SMC4-227ENST00000497984 OFD1O75665 1012 aa4.8□□□□□ -1.64
SMC4-227ENST00000497984 FAM90A13PP0C7W8 464 aa4.8□□□□□ -1.64
SMC4-227ENST00000497984 FAM90A24PP0C7X0 464 aa4.8□□□□□ -1.64
SMC4-227ENST00000497984 CTSAP10619 480 aa4.8□□□□□ -1.64
SMC4-227ENST00000497984 ERV3-1Q14264 604 aa4.8□□□□□ -1.64
SMC4-227ENST00000497984 DCDC5Q6ZRR9 648 aa4.8□□□□□ -1.64
SMC4-227ENST00000497984 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.8□□□□□ -1.646e-65■■■■■ 143.5
SMC4-227ENST00000497984 SPARTQ8N0X7 666 aa4.8□□□□□ -1.64
SMC4-227ENST00000497984 ACRBPQ8NEB7 543 aa4.8□□□□□ -1.64
SMC4-227ENST00000497984 DNAJB14Q8TBM8 379 aa4.8□□□□□ -1.64
SMC4-227ENST00000497984 WDYHV1Q96HA8 205 aa4.8□□□□□ -1.64
SMC4-227ENST00000497984 ZFYVE19Q96K21 471 aa4.8□□□□□ -1.64
SMC4-227ENST00000497984 TRIM5Q9C035 493 aa4.8□□□□□ -1.64
SMC4-227ENST00000497984 PCDH12Q9NPG4 1184 aa4.8□□□□□ -1.64
SMC4-227ENST00000497984 XPNPEP3Q9NQH7 507 aa4.8□□□□□ -1.64
SMC4-227ENST00000497984 IP6K2Q9UHH9 426 aa4.8□□□□□ -1.64
SMC4-227ENST00000497984 ANKRD6Q9Y2G4 727 aa4.8□□□□□ -1.64
SMC4-227ENST00000497984 H3BML4 177 aa4.79□□□□□ -1.64
SMC4-227ENST00000497984 SMAD6O43541 496 aaKnown RBP4.79□□□□□ -1.64
SMC4-227ENST00000497984 NCLP19338 710 aaKnown RBP4.79□□□□□ -1.64
SMC4-227ENST00000497984 HTR1BP28222 390 aa4.79□□□□□ -1.64
SMC4-227ENST00000497984 UQCRC1P31930 480 aa4.79□□□□□ -1.64
SMC4-227ENST00000497984 NEK2P51955 445 aa4.79□□□□□ -1.64
SMC4-227ENST00000497984 TIRAPP58753 221 aa4.79□□□□□ -1.64
SMC4-227ENST00000497984 SLC13A2Q13183 592 aa4.79□□□□□ -1.64
SMC4-227ENST00000497984 TMEM63BQ5T3F8 832 aa4.79□□□□□ -1.64
SMC4-227ENST00000497984 LCE1EQ5T753 118 aa4.79□□□□□ -1.64
SMC4-227ENST00000497984 IFIT1BQ5T764 474 aaKnown RBP4.79□□□□□ -1.64
SMC4-227ENST00000497984 DCAF12L1Q5VU92 463 aa4.79□□□□□ -1.64
SMC4-227ENST00000497984 ANO7Q6IWH7 933 aa4.79□□□□□ -1.64
SMC4-227ENST00000497984 ZDHHC24Q6UX98 284 aa4.79□□□□□ -1.64
SMC4-227ENST00000497984 RANBP10Q6VN20 620 aa4.79□□□□□ -1.64
SMC4-227ENST00000497984 ANKRD13BQ86YJ7 626 aa4.79□□□□□ -1.64
SMC4-227ENST00000497984 DENND1CQ8IV53 801 aa4.79□□□□□ -1.64
SMC4-227ENST00000497984 ARFGAP1Q8N6T3 406 aa4.79□□□□□ -1.64
SMC4-227ENST00000497984 SMRP1Q8NCR6 262 aa4.79□□□□□ -1.64
SMC4-227ENST00000497984 OR6B3Q8NGW1 331 aa4.79□□□□□ -1.64
SMC4-227ENST00000497984 MAML1Q92585 1016 aa4.79□□□□□ -1.64
SMC4-227ENST00000497984 KAZALD1Q96I82 304 aa4.79□□□□□ -1.64
SMC4-227ENST00000497984 VN1R3Q9BXE9 311 aa4.79□□□□□ -1.64
SMC4-227ENST00000497984 ZMAT3Q9HA38 289 aaKnown RBP4.79□□□□□ -1.64
SMC4-227ENST00000497984 SNX15Q9NRS6 342 aa4.79□□□□□ -1.64
SMC4-227ENST00000497984 HOMER2Q9NSB8 354 aa4.79□□□□□ -1.64
SMC4-227ENST00000497984 DNMT3BQ9UBC3 853 aaKnown RBP4.79□□□□□ -1.64
SMC4-227ENST00000497984 COL4A3BPQ9Y5P4 624 aa4.79□□□□□ -1.64
SMC4-227ENST00000497984 HS3ST3B1Q9Y662 390 aa4.79□□□□□ -1.64
SMC4-227ENST00000497984 CDY1Q9Y6F8 540 aa4.79□□□□□ -1.64
SMC4-227ENST00000497984 H3BNX3 289 aa4.78□□□□□ -1.64
SMC4-227ENST00000497984 UBXN7O94888 489 aa4.78□□□□□ -1.64
SMC4-227ENST00000497984 CRYABP02511 175 aaKnown RBP4.78□□□□□ -1.64
SMC4-227ENST00000497984 CREB1P16220 341 aa4.78□□□□□ -1.64
SMC4-227ENST00000497984 KRTAP5-9P26371 169 aa4.78□□□□□ -1.64
SMC4-227ENST00000497984 EPHA3P29320 983 aa4.78□□□□□ -1.64
SMC4-227ENST00000497984 ME1P48163 572 aa4.78□□□□□ -1.64
SMC4-227ENST00000497984 RPS13P62277 151 aaKnown RBP4.78□□□□□ -1.64
SMC4-227ENST00000497984 TIAL1Q01085 375 aaKnown RBP eCLIP4.78□□□□□ -1.64
SMC4-227ENST00000497984 PELI3Q8N2H9 469 aa4.78□□□□□ -1.64
SMC4-227ENST00000497984 MPP5Q8N3R9 675 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms