RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 IGDCC3Q8IVU1 814 aa13.58□□□□□ -0.24
GAPVD1-220ENST00000497580 WDR75Q8IWA0 830 aaKnown RBP13.58□□□□□ -0.24
GAPVD1-220ENST00000497580 CPNE9Q8IYJ1 553 aa13.58□□□□□ -0.24
GAPVD1-220ENST00000497580 ZNF512Q96ME7 567 aaPredicted RBP13.58□□□□□ -0.24
GAPVD1-220ENST00000497580 TRNAU1APQ9NX07 287 aaKnown RBP13.58□□□□□ -0.24
GAPVD1-220ENST00000497580 HBS1LQ9Y450 684 aaKnown RBP13.58□□□□□ -0.24
GAPVD1-220ENST00000497580 DCCP43146 1447 aa13.58□□□□□ -0.24
GAPVD1-220ENST00000497580 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.57□□□□□ -0.24
GAPVD1-220ENST00000497580 PIK3R2O00459 728 aa13.57□□□□□ -0.24
GAPVD1-220ENST00000497580 PORP16435 677 aaPredicted RBP13.57□□□□□ -0.24
GAPVD1-220ENST00000497580 CPOXP36551 454 aa13.57□□□□□ -0.24
GAPVD1-220ENST00000497580 C6orf183Q5T699 404 aa13.57□□□□□ -0.24
GAPVD1-220ENST00000497580 MROH9Q5TGP6 573 aa13.57□□□□□ -0.24
GAPVD1-220ENST00000497580 PPP1R18Q6NYC8 613 aa13.57□□□□□ -0.24
GAPVD1-220ENST00000497580 CHSY1Q86X52 802 aa13.57□□□□□ -0.24
GAPVD1-220ENST00000497580 GRIN3AQ8TCU5 1115 aa13.57□□□□□ -0.24
GAPVD1-220ENST00000497580 EPB41L1Q9H4G0 881 aa13.57□□□□□ -0.24
GAPVD1-220ENST00000497580 TCRBV9S1A1TA0A576 114 aa13.57□□□□□ -0.24
GAPVD1-220ENST00000497580 TMEM63AO94886 807 aa13.57□□□□□ -0.24
GAPVD1-220ENST00000497580 GDF11O95390 407 aa13.57□□□□□ -0.24
GAPVD1-220ENST00000497580 MAPK10P53779 464 aa13.57□□□□□ -0.24
GAPVD1-220ENST00000497580 CDH15P55291 814 aa13.57□□□□□ -0.24
GAPVD1-220ENST00000497580 PSMC5P62195 406 aa13.57□□□□□ -0.24
GAPVD1-220ENST00000497580 RPL7AP62424 266 aaKnown RBP13.57□□□□□ -0.24
GAPVD1-220ENST00000497580 RPL10AP62906 217 aaKnown RBP13.57□□□□□ -0.24
GAPVD1-220ENST00000497580 DCUN1D2Q6PH85 259 aa13.57□□□□□ -0.24
GAPVD1-220ENST00000497580 NDUFAF2Q8N183 169 aa13.57□□□□□ -0.24
GAPVD1-220ENST00000497580 CPT1BQ92523 772 aa13.57□□□□□ -0.24
GAPVD1-220ENST00000497580 XAB2Q9HCS7 855 aaKnown RBP13.57□□□□□ -0.24
GAPVD1-220ENST00000497580 MAN1C1Q9NR34 630 aa13.57□□□□□ -0.24
GAPVD1-220ENST00000497580 ALS2Q96Q42 1657 aa13.57□□□□□ -0.24
GAPVD1-220ENST00000497580 GAS7O60861 476 aa13.57□□□□□ -0.24
GAPVD1-220ENST00000497580 SERPINA6P08185 405 aa13.57□□□□□ -0.24
GAPVD1-220ENST00000497580 OCM2P0CE71 109 aa13.57□□□□□ -0.24
GAPVD1-220ENST00000497580 OCMP0CE72 109 aaPredicted RBP13.57□□□□□ -0.24
GAPVD1-220ENST00000497580 FGFR3P22607 806 aa13.57□□□□□ -0.24
GAPVD1-220ENST00000497580 EIF2B2P49770 351 aaKnown RBP13.57□□□□□ -0.24
GAPVD1-220ENST00000497580 NR1H2P55055 460 aa13.57□□□□□ -0.24
GAPVD1-220ENST00000497580 TCEAL1Q15170 157 aa13.57□□□□□ -0.24
GAPVD1-220ENST00000497580 KCNT1Q5JUK3 1230 aa13.57□□□□□ -0.24
GAPVD1-220ENST00000497580 PPP1R2P3Q6NXS1 205 aa13.57□□□□□ -0.24
GAPVD1-220ENST00000497580 POTEHQ6S545 545 aa13.57□□□□□ -0.24
GAPVD1-220ENST00000497580 CLVS1Q8IUQ0 354 aaPredicted RBP13.57□□□□□ -0.24
GAPVD1-220ENST00000497580 FAM71DQ8N9W8 422 aa13.57□□□□□ -0.24
GAPVD1-220ENST00000497580 USP13Q92995 863 aaPredicted RBP13.57□□□□□ -0.24
GAPVD1-220ENST00000497580 BTBD9Q96Q07 612 aa13.57□□□□□ -0.24
GAPVD1-220ENST00000497580 WDR83Q9BRX9 315 aaKnown RBP13.57□□□□□ -0.24
GAPVD1-220ENST00000497580 TCHPQ9BT92 498 aa13.57□□□□□ -0.24
GAPVD1-220ENST00000497580 FBP2O00757 339 aa13.56□□□□□ -0.24
GAPVD1-220ENST00000497580 SLC16A4O15374 487 aa13.56□□□□□ -0.24
GAPVD1-220ENST00000497580 DCXO43602 365 aa13.56□□□□□ -0.24
GAPVD1-220ENST00000497580 UGT1A9O60656 530 aa13.56□□□□□ -0.24
GAPVD1-220ENST00000497580 PKNOX1P55347 436 aa13.56□□□□□ -0.24
GAPVD1-220ENST00000497580 PRAMEP78395 509 aa13.56□□□□□ -0.24
GAPVD1-220ENST00000497580 FAXCQ5TGI0 409 aa13.56□□□□□ -0.24
GAPVD1-220ENST00000497580 CIAPIN1Q6FI81 312 aa13.56□□□□□ -0.24
GAPVD1-220ENST00000497580 KRT80Q6KB66 452 aa13.56□□□□□ -0.24
GAPVD1-220ENST00000497580 C16orf87Q6PH81 154 aa13.56□□□□□ -0.24
GAPVD1-220ENST00000497580 PPIL6Q8IXY8 311 aa13.56□□□□□ -0.24
GAPVD1-220ENST00000497580 EXD1Q8NHP7 514 aa13.56□□□□□ -0.24
GAPVD1-220ENST00000497580 MZB1Q8WU39 189 aa13.56□□□□□ -0.24
GAPVD1-220ENST00000497580 JADE3Q92613 823 aa13.56□□□□□ -0.24
GAPVD1-220ENST00000497580 KIFC3Q9BVG8 833 aa13.56□□□□□ -0.24
GAPVD1-220ENST00000497580 RBM38Q9H0Z9 239 aaKnown RBP13.56□□□□□ -0.24
GAPVD1-220ENST00000497580 SEMA6AQ9H2E6 1030 aa13.56□□□□□ -0.24
GAPVD1-220ENST00000497580 UNC45AQ9H3U1 944 aa13.56□□□□□ -0.24
GAPVD1-220ENST00000497580 UGT1A7Q9HAW7 530 aa13.56□□□□□ -0.24
GAPVD1-220ENST00000497580 UGT1A10Q9HAW8 530 aa13.56□□□□□ -0.24
GAPVD1-220ENST00000497580 UGT1A8Q9HAW9 530 aa13.56□□□□□ -0.24
GAPVD1-220ENST00000497580 SSU72Q9NP77 194 aaKnown RBP13.56□□□□□ -0.24
GAPVD1-220ENST00000497580 TRIM17Q9Y577 477 aa13.56□□□□□ -0.24
GAPVD1-220ENST00000497580 HTR3EA5X5Y0 456 aa13.56□□□□□ -0.24
GAPVD1-220ENST00000497580 IPO5O00410 1097 aaKnown RBP13.56□□□□□ -0.24
GAPVD1-220ENST00000497580 MEIS2O14770 477 aa13.56□□□□□ -0.24
GAPVD1-220ENST00000497580 PSTPIP1O43586 416 aa13.56□□□□□ -0.24
GAPVD1-220ENST00000497580 CFBP00751 764 aa13.56□□□□□ -0.24
GAPVD1-220ENST00000497580 KCNA4P22459 653 aa13.56□□□□□ -0.24
GAPVD1-220ENST00000497580 PAX3P23760 479 aa13.56□□□□□ -0.24
GAPVD1-220ENST00000497580 CDKL1Q00532 357 aa13.56□□□□□ -0.24
GAPVD1-220ENST00000497580 C1orf220Q5T0J3 134 aa13.56□□□□□ -0.24
GAPVD1-220ENST00000497580 SLC15A3Q8IY34 581 aa13.56□□□□□ -0.24
GAPVD1-220ENST00000497580 TSPAN14Q8NG11 270 aa13.56□□□□□ -0.24
GAPVD1-220ENST00000497580 ACTL9Q8TC94 416 aa13.56□□□□□ -0.24
GAPVD1-220ENST00000497580 TBC1D23Q9NUY8 699 aa13.56□□□□□ -0.24
GAPVD1-220ENST00000497580 E9PBE3 544 aa13.56□□□□□ -0.24
GAPVD1-220ENST00000497580 F8VP50 259 aa13.56□□□□□ -0.24
GAPVD1-220ENST00000497580 KLHL41O60662 606 aa13.56□□□□□ -0.24
GAPVD1-220ENST00000497580 RELAQ04206 551 aa13.56□□□□□ -0.24
GAPVD1-220ENST00000497580 OGFOD2Q6N063 350 aa13.56□□□□□ -0.24
GAPVD1-220ENST00000497580 ADGRG6Q86SQ4 1221 aa13.56□□□□□ -0.24
GAPVD1-220ENST00000497580 RTKN2Q8IZC4 609 aa13.56□□□□□ -0.24
GAPVD1-220ENST00000497580 MARVELD2Q8N4S9 558 aa13.56□□□□□ -0.24
GAPVD1-220ENST00000497580 DQX1Q8TE96 717 aaKnown RBP13.56□□□□□ -0.24
GAPVD1-220ENST00000497580 FIZ1Q96SL8 496 aa13.56□□□□□ -0.24
GAPVD1-220ENST00000497580 RTFDC1Q9BY42 306 aaPredicted RBP13.56□□□□□ -0.24
GAPVD1-220ENST00000497580 PLGRKTQ9HBL7 147 aa13.56□□□□□ -0.24
GAPVD1-220ENST00000497580 WRAP73Q9P2S5 460 aaPredicted RBP13.56□□□□□ -0.24
GAPVD1-220ENST00000497580 EFR3BQ9Y2G0 817 aa13.56□□□□□ -0.24
GAPVD1-220ENST00000497580 CEPT1Q9Y6K0 416 aa13.56□□□□□ -0.24
GAPVD1-220ENST00000497580 TMX2-CTNND1H3BSU7 103 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms