RNA–Protein interactions for RNA: ENST00000497377.5

HLA-B-254, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 917 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-254ENST00000497377 BCAT1P54687 386 aa12.11□□□□□ -0.47
HLA-B-254ENST00000497377 GPC5P78333 572 aa12.11□□□□□ -0.47
HLA-B-254ENST00000497377 FCHO2Q0JRZ9 810 aa12.11□□□□□ -0.47
HLA-B-254ENST00000497377 TAF10Q12962 218 aa12.11□□□□□ -0.47
HLA-B-254ENST00000497377 SNX30Q5VWJ9 437 aa12.11□□□□□ -0.47
HLA-B-254ENST00000497377 TXNDC8Q6A555 127 aa12.11□□□□□ -0.47
HLA-B-254ENST00000497377 VITQ6UXI7 678 aa12.11□□□□□ -0.47
HLA-B-254ENST00000497377 RRAGAQ7L523 313 aa12.11□□□□□ -0.47
HLA-B-254ENST00000497377 ARHGEF19Q8IW93 802 aa12.11□□□□□ -0.47
HLA-B-254ENST00000497377 YAF2Q8IY57 180 aa12.11□□□□□ -0.47
HLA-B-254ENST00000497377 ANKRD52Q8NB46 1076 aa12.11□□□□□ -0.47
HLA-B-254ENST00000497377 DNASE1L2Q92874 299 aa12.11□□□□□ -0.47
HLA-B-254ENST00000497377 IRF7Q92985 503 aa12.11□□□□□ -0.47
HLA-B-254ENST00000497377 PBXIP1Q96AQ6 731 aa12.11□□□□□ -0.47
HLA-B-254ENST00000497377 SHDQ96IW2 340 aa12.11□□□□□ -0.47
HLA-B-254ENST00000497377 LRFN3Q9BTN0 628 aa12.11□□□□□ -0.47
HLA-B-254ENST00000497377 PLA2G2FQ9BZM2 168 aa12.11□□□□□ -0.47
HLA-B-254ENST00000497377 SMOC2Q9H3U7 446 aa12.11□□□□□ -0.47
HLA-B-254ENST00000497377 BRD9Q9H8M2 597 aa12.11□□□□□ -0.47
HLA-B-254ENST00000497377 UBE2TQ9NPD8 197 aaPredicted RBP12.11□□□□□ -0.47
HLA-B-254ENST00000497377 TDP1Q9NUW8 608 aa12.11□□□□□ -0.47
HLA-B-254ENST00000497377 FANCLQ9NW38 375 aa12.11□□□□□ -0.47
HLA-B-254ENST00000497377 THG1LQ9NWX6 298 aaKnown RBP12.11□□□□□ -0.47
HLA-B-254ENST00000497377 HESX1Q9UBX0 185 aa12.11□□□□□ -0.47
HLA-B-254ENST00000497377 HHLA1C9JL84 531 aa12.1□□□□□ -0.47
HLA-B-254ENST00000497377 PES1O00541 588 aaKnown RBP12.1□□□□□ -0.47
HLA-B-254ENST00000497377 ZNF263O14978 683 aa12.1□□□□□ -0.47
HLA-B-254ENST00000497377 CHADO15335 359 aa12.1□□□□□ -0.47
HLA-B-254ENST00000497377 BEST1O76090 585 aa12.1□□□□□ -0.47
HLA-B-254ENST00000497377 CKMP06732 381 aa12.1□□□□□ -0.47
HLA-B-254ENST00000497377 CFHP08603 1231 aa12.1□□□□□ -0.47
HLA-B-254ENST00000497377 TCF3P15923 654 aa12.1□□□□□ -0.47
HLA-B-254ENST00000497377 HDCP19113 662 aa12.1□□□□□ -0.47
HLA-B-254ENST00000497377 SLC9A1P19634 815 aa12.1□□□□□ -0.47
HLA-B-254ENST00000497377 RFX1P22670 979 aa12.1□□□□□ -0.47
HLA-B-254ENST00000497377 TUBP50607 506 aa12.1□□□□□ -0.47
HLA-B-254ENST00000497377 ZNF132P52740 706 aa12.1□□□□□ -0.47
HLA-B-254ENST00000497377 PRKCQQ04759 706 aa12.1□□□□□ -0.47
HLA-B-254ENST00000497377 BST2Q10589 180 aaKnown RBP12.1□□□□□ -0.47
HLA-B-254ENST00000497377 CNGA2Q16280 664 aa12.1□□□□□ -0.47
HLA-B-254ENST00000497377 ANO6Q4KMQ2 910 aa12.1□□□□□ -0.47
HLA-B-254ENST00000497377 ARHGAP29Q52LW3 1261 aa12.1□□□□□ -0.47
HLA-B-254ENST00000497377 HSP90AA4PQ58FG1 418 aa12.1□□□□□ -0.47
HLA-B-254ENST00000497377 LAPTM4BQ86VI4 370 aa12.1□□□□□ -0.47
HLA-B-254ENST00000497377 SUGP1Q8IWZ8 645 aaKnown RBP12.1□□□□□ -0.47
HLA-B-254ENST00000497377 KIAA1958Q8N8K9 716 aa12.1□□□□□ -0.47
HLA-B-254ENST00000497377 RBBP8NLQ8NC74 664 aaPredicted RBP12.1□□□□□ -0.47
HLA-B-254ENST00000497377 ST13P5Q8NFI4 369 aaPredicted RBP12.1□□□□□ -0.47
HLA-B-254ENST00000497377 SCAMP5Q8TAC9 235 aa12.1□□□□□ -0.47
HLA-B-254ENST00000497377 BPIFB1Q8TDL5 484 aa12.1□□□□□ -0.47
HLA-B-254ENST00000497377 KAT5Q92993 513 aa12.1□□□□□ -0.47
HLA-B-254ENST00000497377 KREMEN1Q96MU8 473 aa12.1□□□□□ -0.47
HLA-B-254ENST00000497377 MFSD1Q9H3U5 465 aa12.1□□□□□ -0.47
HLA-B-254ENST00000497377 TRPC7Q9HCX4 862 aa12.1□□□□□ -0.47
HLA-B-254ENST00000497377 TLR8Q9NR97 1041 aaKnown RBP12.1□□□□□ -0.47
HLA-B-254ENST00000497377 SCML2Q9UQR0 700 aa12.1□□□□□ -0.47
HLA-B-254ENST00000497377 HELZP42694 1942 aaKnown RBP12.09□□□□□ -0.47
HLA-B-254ENST00000497377 SMTNL1A8MU46 457 aa12.09□□□□□ -0.47
HLA-B-254ENST00000497377 O00370 1275 aa12.09□□□□□ -0.47
HLA-B-254ENST00000497377 XPO1O14980 1071 aaKnown RBP12.09□□□□□ -0.47
HLA-B-254ENST00000497377 PRAMEF12O95522 483 aa12.09□□□□□ -0.47
HLA-B-254ENST00000497377 OLFM2O95897 454 aa12.09□□□□□ -0.47
HLA-B-254ENST00000497377 ZDHHC11BP0C7U3 371 aa12.09□□□□□ -0.47
HLA-B-254ENST00000497377 SETSIPP0DME0 302 aa12.09□□□□□ -0.47
HLA-B-254ENST00000497377 KRT5P13647 590 aa12.09□□□□□ -0.47
HLA-B-254ENST00000497377 GLULP15104 373 aa12.09□□□□□ -0.47
HLA-B-254ENST00000497377 GDI1P31150 447 aa12.09□□□□□ -0.47
HLA-B-254ENST00000497377 MLLT6P55198 1093 aaPredicted RBP12.09□□□□□ -0.47
HLA-B-254ENST00000497377 SLC7A9P82251 487 aa12.09□□□□□ -0.47
HLA-B-254ENST00000497377 IFRD2Q12894 506 aaPredicted RBP12.09□□□□□ -0.47
HLA-B-254ENST00000497377 GRM2Q14416 872 aa12.09□□□□□ -0.47
HLA-B-254ENST00000497377 KRT31Q15323 416 aa12.09□□□□□ -0.47
HLA-B-254ENST00000497377 MEA1Q16626 185 aa12.09□□□□□ -0.47
HLA-B-254ENST00000497377 GOLGA7BQ2TAP0 167 aa12.09□□□□□ -0.47
HLA-B-254ENST00000497377 FKBP15Q5T1M5 1219 aa12.09□□□□□ -0.47
HLA-B-254ENST00000497377 LCLAT1Q6UWP7 414 aa12.09□□□□□ -0.47
HLA-B-254ENST00000497377 HFE2Q6ZVN8 426 aa12.09□□□□□ -0.47
HLA-B-254ENST00000497377 SIX5Q8N196 739 aa12.09□□□□□ -0.47
HLA-B-254ENST00000497377 FBXL6Q8N531 539 aa12.09□□□□□ -0.47
HLA-B-254ENST00000497377 USP13Q92995 863 aaPredicted RBP12.09□□□□□ -0.47
HLA-B-254ENST00000497377 MSANTD3Q96H12 275 aa12.09□□□□□ -0.47
HLA-B-254ENST00000497377 ARHGEF3Q9NR81 526 aa12.09□□□□□ -0.47
HLA-B-254ENST00000497377 TAB2Q9NYJ8 693 aa12.09□□□□□ -0.47
HLA-B-254ENST00000497377 LIMA1Q9UHB6 759 aaKnown RBP12.09□□□□□ -0.47
HLA-B-254ENST00000497377 TSPAN16Q9UKR8 245 aa12.09□□□□□ -0.47
HLA-B-254ENST00000497377 ARHGAP26Q9UNA1 814 aa12.09□□□□□ -0.47
HLA-B-254ENST00000497377 DAAM1Q9Y4D1 1078 aa12.09□□□□□ -0.47
HLA-B-254ENST00000497377 KIF26AQ9ULI4 1882 aaPredicted RBP12.08□□□□□ -0.48
HLA-B-254ENST00000497377 MYO16Q9Y6X6 1858 aa12.08□□□□□ -0.48
HLA-B-254ENST00000497377 C2orf78A6NCI8 922 aa12.08□□□□□ -0.48
HLA-B-254ENST00000497377 LRRC10BA6NIK2 292 aa12.08□□□□□ -0.48
HLA-B-254ENST00000497377 RNF225M0QZC1 329 aaPredicted RBP12.08□□□□□ -0.48
HLA-B-254ENST00000497377 MAP3K7O43318 606 aa12.08□□□□□ -0.48
HLA-B-254ENST00000497377 MED7O43513 233 aa12.08□□□□□ -0.48
HLA-B-254ENST00000497377 CAVIN2O95810 425 aa12.08□□□□□ -0.48
HLA-B-254ENST00000497377 ABL1P00519 1130 aa12.08□□□□□ -0.48
HLA-B-254ENST00000497377 OAS1P00973 400 aaKnown RBP12.08□□□□□ -0.48
HLA-B-254ENST00000497377 ZNF18P17022 549 aa12.08□□□□□ -0.48
HLA-B-254ENST00000497377 CDK11BP21127 795 aaKnown RBP12.08□□□□□ -0.48
HLA-B-254ENST00000497377 PLA2G4AP47712 749 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms