RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 ACAP3Q96P50 834 aa16■□□□□ 0.15
SDF4-207ENST00000494748 COPEO14579 308 aa15.99■□□□□ 0.15
SDF4-207ENST00000494748 UGT1A9O60656 530 aa15.99■□□□□ 0.15
SDF4-207ENST00000494748 LSM8O95777 96 aaKnown RBP15.99■□□□□ 0.15
SDF4-207ENST00000494748 RFC1P35251 1148 aaPredicted RBP15.99■□□□□ 0.15
SDF4-207ENST00000494748 BTKQ06187 659 aa15.99■□□□□ 0.15
SDF4-207ENST00000494748 RABGAP1LQ5R372 815 aa15.99■□□□□ 0.15
SDF4-207ENST00000494748 RASIP1Q5U651 963 aa15.99■□□□□ 0.15
SDF4-207ENST00000494748 TTC39BQ5VTQ0 682 aaPredicted RBP15.99■□□□□ 0.15
SDF4-207ENST00000494748 DHDDSQ86SQ9 333 aa15.99■□□□□ 0.15
SDF4-207ENST00000494748 NAT14Q8WUY8 206 aa15.99■□□□□ 0.15
SDF4-207ENST00000494748 E2F7Q96AV8 911 aa15.99■□□□□ 0.15
SDF4-207ENST00000494748 UGT1A7Q9HAW7 530 aa15.99■□□□□ 0.15
SDF4-207ENST00000494748 UGT1A10Q9HAW8 530 aa15.99■□□□□ 0.15
SDF4-207ENST00000494748 UGT1A8Q9HAW9 530 aa15.99■□□□□ 0.15
SDF4-207ENST00000494748 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.99■□□□□ 0.15
SDF4-207ENST00000494748 FKBP6O75344 327 aa15.99■□□□□ 0.15
SDF4-207ENST00000494748 SERPINA6P08185 405 aa15.99■□□□□ 0.15
SDF4-207ENST00000494748 INHBAP08476 426 aa15.99■□□□□ 0.15
SDF4-207ENST00000494748 TBXAS1P24557 533 aaPredicted RBP15.99■□□□□ 0.15
SDF4-207ENST00000494748 TAF5Q15542 800 aa15.99■□□□□ 0.15
SDF4-207ENST00000494748 ARMC3Q5W041 872 aa15.99■□□□□ 0.15
SDF4-207ENST00000494748 ATG14Q6ZNE5 492 aa15.99■□□□□ 0.15
SDF4-207ENST00000494748 SLC26A11Q86WA9 606 aa15.99■□□□□ 0.15
SDF4-207ENST00000494748 TFAP2BQ92481 460 aa15.99■□□□□ 0.15
SDF4-207ENST00000494748 DTNBP1Q96EV8 351 aa15.99■□□□□ 0.15
SDF4-207ENST00000494748 WWP1Q9H0M0 922 aa15.99■□□□□ 0.15
SDF4-207ENST00000494748 MARCOQ9UEW3 520 aaPredicted RBP15.99■□□□□ 0.15
SDF4-207ENST00000494748 CCDC195A0A1B0GUA6 201 aa15.99■□□□□ 0.15
SDF4-207ENST00000494748 A6NJR5 290 aa15.99■□□□□ 0.15
SDF4-207ENST00000494748 CIB2O75838 187 aa15.99■□□□□ 0.15
SDF4-207ENST00000494748 ATG7O95352 703 aa15.99■□□□□ 0.15
SDF4-207ENST00000494748 BAG2O95816 211 aa15.99■□□□□ 0.15
SDF4-207ENST00000494748 EIF2AK2P19525 551 aaKnown RBP15.99■□□□□ 0.15
SDF4-207ENST00000494748 SFNP31947 248 aa15.99■□□□□ 0.15
SDF4-207ENST00000494748 L1CAMP32004 1257 aa15.99■□□□□ 0.15
SDF4-207ENST00000494748 ALDH18A1P54886 795 aaKnown RBP15.99■□□□□ 0.15
SDF4-207ENST00000494748 CHI3L2Q15782 390 aa15.99■□□□□ 0.15
SDF4-207ENST00000494748 SYCP2LQ5T4T6 812 aa15.99■□□□□ 0.15
SDF4-207ENST00000494748 LPCAT4Q643R3 524 aa15.99■□□□□ 0.15
SDF4-207ENST00000494748 DCUN1D2Q6PH85 259 aa15.99■□□□□ 0.15
SDF4-207ENST00000494748 STKLD1Q8NE28 680 aa15.99■□□□□ 0.15
SDF4-207ENST00000494748 PYDC1Q8WXC3 89 aa15.99■□□□□ 0.15
SDF4-207ENST00000494748 RSAD2Q8WXG1 361 aa15.99■□□□□ 0.15
SDF4-207ENST00000494748 LMCD1Q9NZU5 365 aa15.99■□□□□ 0.15
SDF4-207ENST00000494748 CYTH4Q9UIA0 394 aa15.99■□□□□ 0.15
SDF4-207ENST00000494748 ZNF180Q9UJW8 692 aa15.99■□□□□ 0.15
SDF4-207ENST00000494748 AGO2Q9UKV8 859 aaKnown RBP15.99■□□□□ 0.15
SDF4-207ENST00000494748 C6orf222P0C671 652 aaPredicted RBP15.98■□□□□ 0.15
SDF4-207ENST00000494748 AQP4P55087 323 aa15.98■□□□□ 0.15
SDF4-207ENST00000494748 BASP1P80723 227 aaKnown RBP15.98■□□□□ 0.15
SDF4-207ENST00000494748 PGM2L1Q6PCE3 622 aa15.98■□□□□ 0.15
SDF4-207ENST00000494748 FBXL19Q6PCT2 694 aa15.98■□□□□ 0.15
SDF4-207ENST00000494748 ITFG2Q969R8 447 aa15.98■□□□□ 0.15
SDF4-207ENST00000494748 OPTNQ96CV9 577 aa15.98■□□□□ 0.15
SDF4-207ENST00000494748 CEP170P1Q96L14 293 aa15.98■□□□□ 0.15
SDF4-207ENST00000494748 CENPKQ9BS16 269 aa15.98■□□□□ 0.15
SDF4-207ENST00000494748 POPDC2Q9HBU9 364 aa15.98■□□□□ 0.15
SDF4-207ENST00000494748 IRAK4Q9NWZ3 460 aa15.98■□□□□ 0.15
SDF4-207ENST00000494748 CCNT2O60583 730 aaKnown RBP15.98■□□□□ 0.15
SDF4-207ENST00000494748 WEE2P0C1S8 567 aa15.98■□□□□ 0.15
SDF4-207ENST00000494748 SMIM18P0DKX4 95 aa15.98■□□□□ 0.15
SDF4-207ENST00000494748 KITP10721 976 aa15.98■□□□□ 0.15
SDF4-207ENST00000494748 INHBCP55103 352 aa15.98■□□□□ 0.15
SDF4-207ENST00000494748 YWHAZP63104 245 aaKnown RBP15.98■□□□□ 0.15
SDF4-207ENST00000494748 DLG1Q12959 904 aa15.98■□□□□ 0.15
SDF4-207ENST00000494748 CDAN1Q8IWY9 1227 aa15.98■□□□□ 0.15
SDF4-207ENST00000494748 TTC13Q8NBP0 860 aa15.98■□□□□ 0.15
SDF4-207ENST00000494748 CGRRF1Q99675 332 aa15.98■□□□□ 0.15
SDF4-207ENST00000494748 ADGRA2Q96PE1 1338 aa15.98■□□□□ 0.15
SDF4-207ENST00000494748 G3V3G9 751 aa15.98■□□□□ 0.15
SDF4-207ENST00000494748 CST3P01034 146 aaPredicted RBP15.98■□□□□ 0.15
SDF4-207ENST00000494748 PENKP01210 267 aaPredicted RBP15.98■□□□□ 0.15
SDF4-207ENST00000494748 PRKCHP24723 683 aa15.98■□□□□ 0.15
SDF4-207ENST00000494748 TMPRSS15P98073 1019 aa15.98■□□□□ 0.15
SDF4-207ENST00000494748 KRT76Q01546 638 aa15.98■□□□□ 0.15
SDF4-207ENST00000494748 TAP1Q03518 808 aa15.98■□□□□ 0.15
SDF4-207ENST00000494748 MTMR2Q13614 643 aa15.98■□□□□ 0.15
SDF4-207ENST00000494748 TBCCQ15814 346 aa15.98■□□□□ 0.15
SDF4-207ENST00000494748 DCAF8Q5TAQ9 597 aa15.98■□□□□ 0.15
SDF4-207ENST00000494748 UGT2A3Q6UWM9 527 aa15.98■□□□□ 0.15
SDF4-207ENST00000494748 RBAKQ9NYW8 714 aaPredicted RBP15.98■□□□□ 0.15
SDF4-207ENST00000494748 HSFX1Q9UBD0 423 aa15.98■□□□□ 0.15
SDF4-207ENST00000494748 AGTPBP1Q9UPW5 1226 aa15.98■□□□□ 0.15
SDF4-207ENST00000494748 CNTNAP1P78357 1384 aa15.97■□□□□ 0.15
SDF4-207ENST00000494748 APOC4-APOC2K7ER74 178 aa15.97■□□□□ 0.15
SDF4-207ENST00000494748 TOP3BO95985 862 aaKnown RBP15.97■□□□□ 0.15
SDF4-207ENST00000494748 APOC2P02655 101 aa15.97■□□□□ 0.15
SDF4-207ENST00000494748 UQCRBP14927 111 aa15.97■□□□□ 0.15
SDF4-207ENST00000494748 NPR1P16066 1061 aa15.97■□□□□ 0.15
SDF4-207ENST00000494748 SLC25A3Q00325 362 aa15.97■□□□□ 0.15
SDF4-207ENST00000494748 RALGPS1Q5JS13 557 aa15.97■□□□□ 0.15
SDF4-207ENST00000494748 SOX13Q9UN79 622 aa15.97■□□□□ 0.15
SDF4-207ENST00000494748 AP1G1O43747 822 aa15.97■□□□□ 0.15
SDF4-207ENST00000494748 OR6B1O95007 311 aa15.97■□□□□ 0.15
SDF4-207ENST00000494748 PEX2P28328 305 aa15.97■□□□□ 0.15
SDF4-207ENST00000494748 LIG4P49917 911 aa15.97■□□□□ 0.15
SDF4-207ENST00000494748 EIF3EP60228 445 aaKnown RBP15.97■□□□□ 0.15
SDF4-207ENST00000494748 GPAT2Q6NUI2 795 aa15.97■□□□□ 0.15
SDF4-207ENST00000494748 MAVSQ7Z434 540 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms