RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 TMPRSS9Q7Z410 1059 aa5.28□□□□□ -1.56
SMC4-224ENST00000494612 GAS2L3Q86XJ1 694 aa5.28□□□□□ -1.56
SMC4-224ENST00000494612 TOR1AIP2Q8NFQ8 470 aa5.28□□□□□ -1.56
SMC4-224ENST00000494612 ZBTB45Q96K62 511 aaPredicted RBP5.28□□□□□ -1.56
SMC4-224ENST00000494612 PTDSS2Q9BVG9 487 aa5.28□□□□□ -1.56
SMC4-224ENST00000494612 ACTRT3Q9BYD9 372 aa5.28□□□□□ -1.56
SMC4-224ENST00000494612 AMBRA1Q9C0C7 1298 aa5.28□□□□□ -1.56
SMC4-224ENST00000494612 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.28□□□□□ -1.56
SMC4-224ENST00000494612 KCTD5Q9NXV2 234 aa5.28□□□□□ -1.56
SMC4-224ENST00000494612 SLC17A6Q9P2U8 582 aa5.28□□□□□ -1.56
SMC4-224ENST00000494612 LRIT1Q9P2V4 623 aa5.28□□□□□ -1.56
SMC4-224ENST00000494612 SLC39A10Q9ULF5 831 aa5.28□□□□□ -1.56
SMC4-224ENST00000494612 NEU2Q9Y3R4 380 aa5.28□□□□□ -1.56
SMC4-224ENST00000494612 A0A087WV62 115 aa5.27□□□□□ -1.57
SMC4-224ENST00000494612 A0A087WZ62 844 aa5.27□□□□□ -1.57
SMC4-224ENST00000494612 PODXLO00592 558 aa5.27□□□□□ -1.57
SMC4-224ENST00000494612 RRP9O43818 475 aaKnown RBP5.27□□□□□ -1.57
SMC4-224ENST00000494612 VNN1O95497 513 aa5.27□□□□□ -1.57
SMC4-224ENST00000494612 HGFP14210 728 aa5.27□□□□□ -1.57
SMC4-224ENST00000494612 KCNA3P22001 575 aa5.27□□□□□ -1.57
SMC4-224ENST00000494612 ATICP31939 592 aa5.27□□□□□ -1.57
SMC4-224ENST00000494612 TNFAIP2Q03169 654 aa5.27□□□□□ -1.57
SMC4-224ENST00000494612 LY6KQ17RY6 165 aa5.27□□□□□ -1.57
SMC4-224ENST00000494612 SLC15A3Q8IY34 581 aa5.27□□□□□ -1.57
SMC4-224ENST00000494612 SPARTQ8N0X7 666 aa5.27□□□□□ -1.57
SMC4-224ENST00000494612 ZNF366Q8N895 744 aa5.27□□□□□ -1.57
SMC4-224ENST00000494612 VGLL2Q8N8G2 317 aa5.27□□□□□ -1.57
SMC4-224ENST00000494612 C9orf106Q8NAJ2 232 aa5.27□□□□□ -1.57
SMC4-224ENST00000494612 ZNF527Q8NB42 609 aa5.27□□□□□ -1.57
SMC4-224ENST00000494612 GLIS1Q8NBF1 620 aa5.27□□□□□ -1.57
SMC4-224ENST00000494612 B3GALNT2Q8NCR0 500 aa5.27□□□□□ -1.57
SMC4-224ENST00000494612 ACTRT2Q8TDY3 377 aa5.27□□□□□ -1.57
SMC4-224ENST00000494612 IPO4Q8TEX9 1081 aaKnown RBP5.27□□□□□ -1.57
SMC4-224ENST00000494612 LPIN2Q92539 896 aa5.27□□□□□ -1.57
SMC4-224ENST00000494612 FAM136AQ96C01 138 aa5.27□□□□□ -1.57
SMC4-224ENST00000494612 COLEC11Q9BWP8 271 aa5.27□□□□□ -1.57
SMC4-224ENST00000494612 KRTAP1-5Q9BYS1 174 aa5.27□□□□□ -1.57
SMC4-224ENST00000494612 MAGEB5Q9BZ81 275 aa5.27□□□□□ -1.57
SMC4-224ENST00000494612 MYH16Q9H6N6 1097 aa5.27□□□□□ -1.57
SMC4-224ENST00000494612 HEYLQ9NQ87 328 aaPredicted RBP5.27□□□□□ -1.57
SMC4-224ENST00000494612 INTS13Q9NVM9 706 aa5.27□□□□□ -1.57
SMC4-224ENST00000494612 ARPP21Q9UBL0 812 aaPredicted RBP5.27□□□□□ -1.57
SMC4-224ENST00000494612 SSX2IPQ9Y2D8 614 aa5.27□□□□□ -1.57
SMC4-224ENST00000494612 PAXBP1Q9Y5B6 917 aa5.27□□□□□ -1.57
SMC4-224ENST00000494612 CDY1Q9Y6F8 540 aa5.27□□□□□ -1.57
SMC4-224ENST00000494612 POLR2AP24928 1970 aaKnown RBP5.26□□□□□ -1.57
SMC4-224ENST00000494612 LOC102724159A0A0B4J2E5 919 aa5.26□□□□□ -1.57
SMC4-224ENST00000494612 IFRD1O00458 451 aaPredicted RBP5.26□□□□□ -1.57
SMC4-224ENST00000494612 PIP5K1BO14986 540 aa5.26□□□□□ -1.57
SMC4-224ENST00000494612 AREL1O15033 823 aa5.26□□□□□ -1.57
SMC4-224ENST00000494612 ADAMTS3O15072 1205 aa5.26□□□□□ -1.57
SMC4-224ENST00000494612 PLA2G6O60733 806 aa5.26□□□□□ -1.57
SMC4-224ENST00000494612 TCEA3O75764 348 aa5.26□□□□□ -1.57
SMC4-224ENST00000494612 SOAT2O75908 522 aa5.26□□□□□ -1.57
SMC4-224ENST00000494612 ONECUT2O95948 504 aa5.26□□□□□ -1.57
SMC4-224ENST00000494612 RHOP08100 348 aa5.26□□□□□ -1.57
SMC4-224ENST00000494612 CHRM2P08172 466 aa5.26□□□□□ -1.57
SMC4-224ENST00000494612 NTSR1P30989 418 aa5.26□□□□□ -1.57
SMC4-224ENST00000494612 CHKAP35790 457 aa5.26□□□□□ -1.57
SMC4-224ENST00000494612 HLXQ14774 488 aaPredicted RBP5.26□□□□□ -1.57
SMC4-224ENST00000494612 PWP2Q15269 919 aaKnown RBP5.26□□□□□ -1.57
SMC4-224ENST00000494612 PUM3Q15397 648 aaKnown RBP5.26□□□□□ -1.57
SMC4-224ENST00000494612 ARHGAP15Q53QZ3 475 aa5.26□□□□□ -1.57
SMC4-224ENST00000494612 RAP1GAP2Q684P5 730 aa5.26□□□□□ -1.57
SMC4-224ENST00000494612 KIAA0895LQ68EN5 471 aa5.26□□□□□ -1.57
SMC4-224ENST00000494612 ERAP2Q6P179 960 aa5.26□□□□□ -1.57
SMC4-224ENST00000494612 CATSPERGQ6ZRH7 1159 aa5.26□□□□□ -1.57
SMC4-224ENST00000494612 C1QL2Q7Z5L3 287 aa5.26□□□□□ -1.57
SMC4-224ENST00000494612 CERS3Q8IU89 383 aa5.26□□□□□ -1.57
SMC4-224ENST00000494612 SSH3Q8TE77 659 aa5.26□□□□□ -1.57
SMC4-224ENST00000494612 SMCR8Q8TEV9 937 aaPredicted RBP5.26□□□□□ -1.57
SMC4-224ENST00000494612 TTLL2Q9BWV7 592 aa5.26□□□□□ -1.57
SMC4-224ENST00000494612 PCDHAC1Q9H158 963 aa5.26□□□□□ -1.57
SMC4-224ENST00000494612 OBP2BQ9NPH6 170 aa5.26□□□□□ -1.57
SMC4-224ENST00000494612 XPNPEP3Q9NQH7 507 aa5.26□□□□□ -1.57
SMC4-224ENST00000494612 DNMT3BQ9UBC3 853 aaKnown RBP5.26□□□□□ -1.57
SMC4-224ENST00000494612 ZMYND8Q9ULU4 1186 aaPredicted RBP5.26□□□□□ -1.57
SMC4-224ENST00000494612 SPATA31A3Q5VYP0 1347 aa5.25□□□□□ -1.57
SMC4-224ENST00000494612 PLEKHD1A6NEE1 506 aa5.25□□□□□ -1.57
SMC4-224ENST00000494612 AQP12BA6NM10 295 aa5.25□□□□□ -1.57
SMC4-224ENST00000494612 CSF1RP07333 972 aa5.25□□□□□ -1.57
SMC4-224ENST00000494612 ABCG1P45844 678 aa5.25□□□□□ -1.57
SMC4-224ENST00000494612 ALDH9A1P49189 494 aa5.25□□□□□ -1.57
SMC4-224ENST00000494612 GPR162Q16538 588 aa5.25□□□□□ -1.57
SMC4-224ENST00000494612 ZNF750Q32MQ0 723 aa5.25□□□□□ -1.57
SMC4-224ENST00000494612 ICE2Q659A1 982 aa5.25□□□□□ -1.57
SMC4-224ENST00000494612 ATG16L2Q8NAA4 619 aa5.25□□□□□ -1.57
SMC4-224ENST00000494612 FANCBQ8NB91 859 aa5.25□□□□□ -1.57
SMC4-224ENST00000494612 MYCBPAPQ8TBZ2 947 aa5.25□□□□□ -1.57
SMC4-224ENST00000494612 TMEM41AQ96HV5 264 aa5.25□□□□□ -1.57
SMC4-224ENST00000494612 TIMP4Q99727 224 aa5.25□□□□□ -1.57
SMC4-224ENST00000494612 DKK4Q9UBT3 224 aa5.25□□□□□ -1.57
SMC4-224ENST00000494612 HPSEQ9Y251 543 aa5.25□□□□□ -1.57
SMC4-224ENST00000494612 WIPF3A6NGB9 483 aa5.24□□□□□ -1.57
SMC4-224ENST00000494612 FFAR2O15552 330 aa5.24□□□□□ -1.57
SMC4-224ENST00000494612 CCP110O43303 1012 aa5.24□□□□□ -1.57
SMC4-224ENST00000494612 GABRB3P28472 473 aa5.24□□□□□ -1.57
SMC4-224ENST00000494612 CLCN2P51788 898 aa5.24□□□□□ -1.57
SMC4-224ENST00000494612 PROK1P58294 105 aa5.24□□□□□ -1.57
SMC4-224ENST00000494612 KRTAP10-6P60371 365 aaPredicted RBP5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms