RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 HMGA1P17096 107 aaKnown RBP12.24□□□□□ -0.45
CTSA-209ENST00000493522 CDC25CP30307 473 aa12.24□□□□□ -0.45
CTSA-209ENST00000493522 GNA15P30679 374 aa12.24□□□□□ -0.45
CTSA-209ENST00000493522 BCAT1P54687 386 aa12.24□□□□□ -0.45
CTSA-209ENST00000493522 SLC8A3P57103 927 aa12.24□□□□□ -0.45
CTSA-209ENST00000493522 POLR2FP61218 127 aaKnown RBP12.24□□□□□ -0.45
CTSA-209ENST00000493522 GPC5P78333 572 aa12.24□□□□□ -0.45
CTSA-209ENST00000493522 CYP4F8P98187 520 aa12.24□□□□□ -0.45
CTSA-209ENST00000493522 DRAP1Q14919 205 aaPredicted RBP12.24□□□□□ -0.45
CTSA-209ENST00000493522 TEAD2Q15562 447 aa12.24□□□□□ -0.45
CTSA-209ENST00000493522 DPY19L2P1Q6NXN4 242 aa12.24□□□□□ -0.45
CTSA-209ENST00000493522 PARM1Q6UWI2 310 aa12.24□□□□□ -0.45
CTSA-209ENST00000493522 NPAS3Q8IXF0 933 aa12.24□□□□□ -0.45
CTSA-209ENST00000493522 ZMIZ2Q8NF64 920 aa12.24□□□□□ -0.45
CTSA-209ENST00000493522 TFAP2BQ92481 460 aa12.24□□□□□ -0.45
CTSA-209ENST00000493522 FGF13Q92913 245 aa12.24□□□□□ -0.45
CTSA-209ENST00000493522 TRMT2BQ96GJ1 504 aaKnown RBP12.24□□□□□ -0.45
CTSA-209ENST00000493522 CEP295NLQ96MC4 621 aa12.24□□□□□ -0.45
CTSA-209ENST00000493522 NAP1L5Q96NT1 182 aaPredicted RBP12.24□□□□□ -0.45
CTSA-209ENST00000493522 LRRC3Q9BY71 257 aa12.24□□□□□ -0.45
CTSA-209ENST00000493522 DUSP16Q9BY84 665 aa12.24□□□□□ -0.45
CTSA-209ENST00000493522 ATXN3LQ9H3M9 355 aa12.24□□□□□ -0.45
CTSA-209ENST00000493522 SLITRK6Q9H5Y7 841 aa12.24□□□□□ -0.45
CTSA-209ENST00000493522 NLRC4Q9NPP4 1024 aa12.24□□□□□ -0.45
CTSA-209ENST00000493522 EHD2Q9NZN4 543 aa12.24□□□□□ -0.45
CTSA-209ENST00000493522 KIAA1257Q9ULG3 409 aa12.24□□□□□ -0.45
CTSA-209ENST00000493522 CNTN6Q9UQ52 1028 aa12.24□□□□□ -0.45
CTSA-209ENST00000493522 CEP250Q9BV73 2442 aa12.23□□□□□ -0.45
CTSA-209ENST00000493522 KANSL1LA0AUZ9 987 aa12.23□□□□□ -0.45
CTSA-209ENST00000493522 F8VZ95 297 aa12.23□□□□□ -0.45
CTSA-209ENST00000493522 NRG2O14511 850 aaPredicted RBP12.23□□□□□ -0.45
CTSA-209ENST00000493522 EPHB6O15197 1021 aa12.23□□□□□ -0.45
CTSA-209ENST00000493522 CYP26A1O43174 497 aa12.23□□□□□ -0.45
CTSA-209ENST00000493522 MICAL2O94851 1124 aa12.23□□□□□ -0.45
CTSA-209ENST00000493522 RTN3O95197 1032 aaPredicted RBP12.23□□□□□ -0.45
CTSA-209ENST00000493522 GLULP15104 373 aa12.23□□□□□ -0.45
CTSA-209ENST00000493522 SLC5A3P53794 718 aa12.23□□□□□ -0.45
CTSA-209ENST00000493522 UBASH3AP57075 661 aa12.23□□□□□ -0.45
CTSA-209ENST00000493522 USP46P62068 366 aa12.23□□□□□ -0.45
CTSA-209ENST00000493522 PFKPQ01813 784 aa12.23□□□□□ -0.45
CTSA-209ENST00000493522 PRKCQQ04759 706 aa12.23□□□□□ -0.45
CTSA-209ENST00000493522 BST2Q10589 180 aaKnown RBP12.23□□□□□ -0.45
CTSA-209ENST00000493522 PUM1Q14671 1186 aaKnown RBP eCLIP12.23□□□□□ -0.45
CTSA-209ENST00000493522 STILQ15468 1287 aa12.23□□□□□ -0.45
CTSA-209ENST00000493522 MLF2Q15773 248 aaPredicted RBP12.23□□□□□ -0.45
CTSA-209ENST00000493522 ZNF528Q3MIS6 628 aa12.23□□□□□ -0.45
CTSA-209ENST00000493522 ARHGAP15Q53QZ3 475 aa12.23□□□□□ -0.45
CTSA-209ENST00000493522 GAREM2Q75VX8 874 aa12.23□□□□□ -0.45
CTSA-209ENST00000493522 TTC30AQ86WT1 665 aa12.23□□□□□ -0.45
CTSA-209ENST00000493522 GPIHBP1Q8IV16 184 aa12.23□□□□□ -0.45
CTSA-209ENST00000493522 NUP93Q8N1F7 819 aa12.23□□□□□ -0.45
CTSA-209ENST00000493522 ANKRD52Q8NB46 1076 aa12.23□□□□□ -0.45
CTSA-209ENST00000493522 ST13P5Q8NFI4 369 aaPredicted RBP12.23□□□□□ -0.45
CTSA-209ENST00000493522 FBXO32Q969P5 355 aa12.23□□□□□ -0.45
CTSA-209ENST00000493522 MCRS1Q96EZ8 462 aa12.23□□□□□ -0.45
CTSA-209ENST00000493522 SPAG5Q96R06 1193 aa12.23□□□□□ -0.45
CTSA-209ENST00000493522 RPP25Q9BUL9 199 aaKnown RBP12.23□□□□□ -0.45
CTSA-209ENST00000493522 NAA15Q9BXJ9 866 aaKnown RBP12.23□□□□□ -0.45
CTSA-209ENST00000493522 IL21Q9HBE4 155 aa12.23□□□□□ -0.45
CTSA-209ENST00000493522 CSNK1G1Q9HCP0 422 aa12.23□□□□□ -0.45
CTSA-209ENST00000493522 ACP6Q9NPH0 428 aa12.23□□□□□ -0.45
CTSA-209ENST00000493522 IFNKQ9P0W0 207 aa12.23□□□□□ -0.45
CTSA-209ENST00000493522 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.23□□□□□ -0.45
CTSA-209ENST00000493522 DAAM1Q9Y4D1 1078 aa12.23□□□□□ -0.45
CTSA-209ENST00000493522 NCOR2Q9Y618 2525 aa12.22□□□□□ -0.45
CTSA-209ENST00000493522 FOXN3O00409 490 aaPredicted RBP12.22□□□□□ -0.45
CTSA-209ENST00000493522 LAMTOR5O43504 91 aa12.22□□□□□ -0.45
CTSA-209ENST00000493522 MED7O43513 233 aa12.22□□□□□ -0.45
CTSA-209ENST00000493522 MOSPD3O75425 235 aa12.22□□□□□ -0.45
CTSA-209ENST00000493522 TADA3O75528 432 aa12.22□□□□□ -0.45
CTSA-209ENST00000493522 TPM3P06753 285 aa12.22□□□□□ -0.45
CTSA-209ENST00000493522 SETSIPP0DME0 302 aa12.22□□□□□ -0.45
CTSA-209ENST00000493522 YWHAQP27348 245 aa12.22□□□□□ -0.45
CTSA-209ENST00000493522 MAGEA9P43362 315 aa12.22□□□□□ -0.45
CTSA-209ENST00000493522 PTK2Q05397 1052 aa12.22□□□□□ -0.45
CTSA-209ENST00000493522 PDE4CQ08493 712 aa12.22□□□□□ -0.45
CTSA-209ENST00000493522 UBXN2BQ14CS0 331 aa12.22□□□□□ -0.45
CTSA-209ENST00000493522 STXBP5Q5T5C0 1151 aa12.22□□□□□ -0.45
CTSA-209ENST00000493522 GPR158Q5T848 1215 aa12.22□□□□□ -0.45
CTSA-209ENST00000493522 LCLAT1Q6UWP7 414 aa12.22□□□□□ -0.45
CTSA-209ENST00000493522 GPRIN1Q7Z2K8 1008 aa12.22□□□□□ -0.45
CTSA-209ENST00000493522 CACNA2D4Q7Z3S7 1137 aa12.22□□□□□ -0.45
CTSA-209ENST00000493522 UBA3Q8TBC4 463 aa12.22□□□□□ -0.45
CTSA-209ENST00000493522 MRPS31Q92665 395 aaKnown RBP12.22□□□□□ -0.45
CTSA-209ENST00000493522 MYRFLQ96LU7 910 aa12.22□□□□□ -0.45
CTSA-209ENST00000493522 SLITRK1Q96PX8 696 aa12.22□□□□□ -0.45
CTSA-209ENST00000493522 ZSWIM1Q9BR11 485 aa12.22□□□□□ -0.45
CTSA-209ENST00000493522 TTLL2Q9BWV7 592 aa12.22□□□□□ -0.45
CTSA-209ENST00000493522 STK33Q9BYT3 514 aa12.22□□□□□ -0.45
CTSA-209ENST00000493522 OSBPL6Q9BZF3 934 aa12.22□□□□□ -0.45
CTSA-209ENST00000493522 GPR88Q9GZN0 384 aa12.22□□□□□ -0.45
CTSA-209ENST00000493522 TRPC7Q9HCX4 862 aa12.22□□□□□ -0.45
CTSA-209ENST00000493522 SPATA6Q9NWH7 488 aaPredicted RBP12.22□□□□□ -0.45
CTSA-209ENST00000493522 FBXO4Q9UKT5 387 aa12.22□□□□□ -0.45
CTSA-209ENST00000493522 GPR179Q6PRD1 2367 aa12.21□□□□□ -0.45
CTSA-209ENST00000493522 COL4A2P08572 1712 aa12.21□□□□□ -0.45
CTSA-209ENST00000493522 A0A1W2PQC6 194 aa12.21□□□□□ -0.45
CTSA-209ENST00000493522 TNFRSF10BO14763 440 aa12.21□□□□□ -0.45
CTSA-209ENST00000493522 XPO1O14980 1071 aaKnown RBP12.21□□□□□ -0.45
CTSA-209ENST00000493522 CBFA2T2O43439 604 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms