RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 MICU3Q86XE3 530 aa5.72□□□□□ -1.49
SSX2IP-208ENST00000490476 ZNF354CQ86Y25 554 aa5.72□□□□□ -1.49
SSX2IP-208ENST00000490476 ELOA2Q8IYF1 753 aaPredicted RBP5.72□□□□□ -1.49
SSX2IP-208ENST00000490476 MYCT1Q8N699 235 aa5.72□□□□□ -1.49
SSX2IP-208ENST00000490476 FITM2Q8N6M3 262 aa5.72□□□□□ -1.49
SSX2IP-208ENST00000490476 ZNF527Q8NB42 609 aa5.72□□□□□ -1.49
SSX2IP-208ENST00000490476 PIGBQ92521 554 aa5.72□□□□□ -1.49
SSX2IP-208ENST00000490476 LRRC46Q96FV0 321 aa5.72□□□□□ -1.49
SSX2IP-208ENST00000490476 TMEM41AQ96HV5 264 aa5.72□□□□□ -1.49
SSX2IP-208ENST00000490476 OR14A2Q96R54 314 aa5.72□□□□□ -1.49
SSX2IP-208ENST00000490476 PLA2G12BQ9BX93 195 aa5.72□□□□□ -1.49
SSX2IP-208ENST00000490476 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.72□□□□□ -1.49
SSX2IP-208ENST00000490476 ZNF518BQ9C0D4 1074 aa5.72□□□□□ -1.49
SSX2IP-208ENST00000490476 SERHLQ9NQF3 203 aa5.72□□□□□ -1.49
SSX2IP-208ENST00000490476 USP40Q9NVE5 1235 aa5.72□□□□□ -1.49
SSX2IP-208ENST00000490476 LUZP4Q9P127 313 aa5.72□□□□□ -1.49
SSX2IP-208ENST00000490476 AGAP1Q9UPQ3 857 aa5.72□□□□□ -1.49
SSX2IP-208ENST00000490476 TMX2Q9Y320 296 aa5.72□□□□□ -1.49
SSX2IP-208ENST00000490476 ARID1BQ8NFD5 2236 aaPredicted RBP5.72□□□□□ -1.49
SSX2IP-208ENST00000490476 SPTBN2O15020 2390 aa5.71□□□□□ -1.5
SSX2IP-208ENST00000490476 A0A1W2PPC4 97 aa5.71□□□□□ -1.5
SSX2IP-208ENST00000490476 PYCARD-AS1I3L0S3 204 aa5.71□□□□□ -1.5
SSX2IP-208ENST00000490476 THAP12O43422 761 aa5.71□□□□□ -1.5
SSX2IP-208ENST00000490476 NOBOXO60393 691 aa5.71□□□□□ -1.5
SSX2IP-208ENST00000490476 VPS4BO75351 444 aa5.71□□□□□ -1.5
SSX2IP-208ENST00000490476 DNAJB5O75953 348 aa5.71□□□□□ -1.5
SSX2IP-208ENST00000490476 SERPINB2P05120 415 aa5.71□□□□□ -1.5
SSX2IP-208ENST00000490476 ANXA2P07355 339 aaKnown RBP5.71□□□□□ -1.5
SSX2IP-208ENST00000490476 C8AP07357 584 aa5.71□□□□□ -1.5
SSX2IP-208ENST00000490476 EEF1GP26641 437 aaKnown RBP5.71□□□□□ -1.5
SSX2IP-208ENST00000490476 SLC11A2P49281 568 aa5.71□□□□□ -1.5
SSX2IP-208ENST00000490476 CARSP49589 748 aaKnown RBP5.71□□□□□ -1.5
SSX2IP-208ENST00000490476 PPP2CBP62714 309 aa5.71□□□□□ -1.5
SSX2IP-208ENST00000490476 PPP2CAP67775 309 aa5.71□□□□□ -1.5
SSX2IP-208ENST00000490476 JAG1P78504 1218 aa5.71□□□□□ -1.5
SSX2IP-208ENST00000490476 HTRA4P83105 476 aaPredicted RBP5.71□□□□□ -1.5
SSX2IP-208ENST00000490476 MXRA7P84157 204 aa5.71□□□□□ -1.5
SSX2IP-208ENST00000490476 ICA1Q05084 483 aa5.71□□□□□ -1.5
SSX2IP-208ENST00000490476 GRM7Q14831 915 aa5.71□□□□□ -1.5
SSX2IP-208ENST00000490476 PUM3Q15397 648 aaKnown RBP5.71□□□□□ -1.5
SSX2IP-208ENST00000490476 PGBD2Q6P3X8 592 aa5.71□□□□□ -1.5
SSX2IP-208ENST00000490476 MED25Q71SY5 747 aa5.71□□□□□ -1.5
SSX2IP-208ENST00000490476 APBB1IPQ7Z5R6 666 aaPredicted RBP5.71□□□□□ -1.5
SSX2IP-208ENST00000490476 PLEKHH3Q7Z736 793 aa5.71□□□□□ -1.5
SSX2IP-208ENST00000490476 TAX1BP1Q86VP1 789 aa5.71□□□□□ -1.5
SSX2IP-208ENST00000490476 LGI4Q8N135 537 aa5.71□□□□□ -1.5
SSX2IP-208ENST00000490476 MB21D1Q8N884 522 aa5.71□□□□□ -1.5
SSX2IP-208ENST00000490476 FAM46DQ8NEK8 389 aa5.71□□□□□ -1.5
SSX2IP-208ENST00000490476 TMIEQ8NEW7 156 aa5.71□□□□□ -1.5
SSX2IP-208ENST00000490476 OR56A3Q8NH54 315 aa5.71□□□□□ -1.5
SSX2IP-208ENST00000490476 ZFP28Q8NHY6 868 aa5.71□□□□□ -1.5
SSX2IP-208ENST00000490476 MUL1Q969V5 352 aa5.71□□□□□ -1.5
SSX2IP-208ENST00000490476 GNRHR2Q96P88 292 aa5.71□□□□□ -1.5
SSX2IP-208ENST00000490476 COLEC11Q9BWP8 271 aa5.71□□□□□ -1.5
SSX2IP-208ENST00000490476 LSM14BQ9BX40 385 aaKnown RBP5.71□□□□□ -1.5
SSX2IP-208ENST00000490476 DPH1Q9BZG8 443 aa5.71□□□□□ -1.5
SSX2IP-208ENST00000490476 TINAGL1Q9GZM7 467 aaPredicted RBP5.71□□□□□ -1.5
SSX2IP-208ENST00000490476 TTYH1Q9H313 450 aaPredicted RBP5.71□□□□□ -1.5
SSX2IP-208ENST00000490476 RLIMQ9NVW2 624 aa5.71□□□□□ -1.5
SSX2IP-208ENST00000490476 MYO1AQ9UBC5 1043 aa5.71□□□□□ -1.5
SSX2IP-208ENST00000490476 MAN2B2Q9Y2E5 1009 aa5.71□□□□□ -1.5
SSX2IP-208ENST00000490476 TBC1D30Q9Y2I9 924 aa5.71□□□□□ -1.5
SSX2IP-208ENST00000490476 CD163L1Q9NR16 1453 aa5.71□□□□□ -1.5
SSX2IP-208ENST00000490476 PMS2P1A4D2B8 440 aa5.7□□□□□ -1.5
SSX2IP-208ENST00000490476 FFAR2O15552 330 aa5.7□□□□□ -1.5
SSX2IP-208ENST00000490476 KIF20AO95235 890 aa5.7□□□□□ -1.5
SSX2IP-208ENST00000490476 THP07101 528 aa5.7□□□□□ -1.5
SSX2IP-208ENST00000490476 MYL4P12829 197 aa5.7□□□□□ -1.5
SSX2IP-208ENST00000490476 TYRP1P17643 537 aa5.7□□□□□ -1.5
SSX2IP-208ENST00000490476 HK1P19367 917 aa5.7□□□□□ -1.5
SSX2IP-208ENST00000490476 POU6F2P78424 691 aaPredicted RBP5.7□□□□□ -1.5
SSX2IP-208ENST00000490476 NFIXQ14938 502 aa5.7□□□□□ -1.5
SSX2IP-208ENST00000490476 ELAVL1Q15717 326 aaKnown RBP5.7□□□□□ -1.5
SSX2IP-208ENST00000490476 ZNF124Q15973 351 aa5.7□□□□□ -1.5
SSX2IP-208ENST00000490476 ST3GAL2Q16842 350 aa5.7□□□□□ -1.5
SSX2IP-208ENST00000490476 DCAF12L1Q5VU92 463 aa5.7□□□□□ -1.5
SSX2IP-208ENST00000490476 FBXO38Q6PIJ6 1188 aa5.7□□□□□ -1.5
SSX2IP-208ENST00000490476 BEND5Q7L4P6 421 aa5.7□□□□□ -1.5
SSX2IP-208ENST00000490476 PDSS2Q86YH6 399 aa5.7□□□□□ -1.5
SSX2IP-208ENST00000490476 SMAP1Q8IYB5 467 aaPredicted RBP5.7□□□□□ -1.5
SSX2IP-208ENST00000490476 SYT8Q8NBV8 401 aa5.7□□□□□ -1.5
SSX2IP-208ENST00000490476 ZSCAN18Q8TBC5 510 aaPredicted RBP5.7□□□□□ -1.5
SSX2IP-208ENST00000490476 RAPGEF4Q8WZA2 1011 aa5.7□□□□□ -1.5
SSX2IP-208ENST00000490476 TRIM63Q969Q1 353 aa5.7□□□□□ -1.5
SSX2IP-208ENST00000490476 C18orf8Q96DM3 657 aa5.7□□□□□ -1.5
SSX2IP-208ENST00000490476 BORCS6Q96GS4 357 aa5.7□□□□□ -1.5
SSX2IP-208ENST00000490476 ZC3H10Q96K80 434 aaKnown RBP5.7□□□□□ -1.5
SSX2IP-208ENST00000490476 KLHL32Q96NJ5 620 aa5.7□□□□□ -1.5
SSX2IP-208ENST00000490476 CDK19Q9BWU1 502 aa5.7□□□□□ -1.5
SSX2IP-208ENST00000490476 TTLL2Q9BWV7 592 aa5.7□□□□□ -1.5
SSX2IP-208ENST00000490476 MS4A7Q9GZW8 240 aaPredicted RBP5.7□□□□□ -1.5
SSX2IP-208ENST00000490476 NELFAQ9H3P2 528 aa5.7□□□□□ -1.5
SSX2IP-208ENST00000490476 A1CFQ9NQ94 594 aaKnown RBP5.7□□□□□ -1.5
SSX2IP-208ENST00000490476 ZNF212Q9UDV6 495 aa5.7□□□□□ -1.5
SSX2IP-208ENST00000490476 PLEKHM1Q9Y4G2 1056 aa5.7□□□□□ -1.5
SSX2IP-208ENST00000490476 PCDHGB3Q9Y5G1 929 aa5.7□□□□□ -1.5
SSX2IP-208ENST00000490476 PLXNA3P51805 1871 aa5.7□□□□□ -1.5
SSX2IP-208ENST00000490476 PCDH11XQ9BZA7 1347 aa5.7□□□□□ -1.5
SSX2IP-208ENST00000490476 PCDH11YQ9BZA8 1340 aa5.7□□□□□ -1.5
SSX2IP-208ENST00000490476 RAB3GAP2Q9H2M9 1393 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms