RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 PDE8BO95263 885 aa3.28□□□□□ -1.89
UBXN4-208ENST00000490163 NTRK1P04629 796 aa3.28□□□□□ -1.89
UBXN4-208ENST00000490163 PIM1P11309 404 aaPredicted RBP3.28□□□□□ -1.89
UBXN4-208ENST00000490163 SFTPCP11686 197 aa3.28□□□□□ -1.89
UBXN4-208ENST00000490163 ATF7P17544 494 aaPredicted RBP3.28□□□□□ -1.89
UBXN4-208ENST00000490163 ZNF200P98182 395 aaPredicted RBP3.28□□□□□ -1.89
UBXN4-208ENST00000490163 PPARAQ07869 468 aa3.28□□□□□ -1.89
UBXN4-208ENST00000490163 NR1I3Q14994 352 aa3.28□□□□□ -1.89
UBXN4-208ENST00000490163 RTP5Q14D33 572 aa3.28□□□□□ -1.89
UBXN4-208ENST00000490163 CYP27C1Q4G0S4 372 aa3.28□□□□□ -1.89
UBXN4-208ENST00000490163 VWA5B1Q5TIE3 1220 aa3.28□□□□□ -1.89
UBXN4-208ENST00000490163 MSANTD2Q6P1R3 559 aa3.28□□□□□ -1.89
UBXN4-208ENST00000490163 SARM1Q6SZW1 724 aa3.28□□□□□ -1.89
UBXN4-208ENST00000490163 MIA2Q96PC5 1412 aa3.28□□□□□ -1.89
UBXN4-208ENST00000490163 SPAG5Q96R06 1193 aa3.28□□□□□ -1.89
UBXN4-208ENST00000490163 TTPALQ9BTX7 342 aa3.28□□□□□ -1.89
UBXN4-208ENST00000490163 CENPOQ9BU64 300 aa3.28□□□□□ -1.89
UBXN4-208ENST00000490163 PLVAPQ9BX97 442 aa3.28□□□□□ -1.89
UBXN4-208ENST00000490163 HSD3B7Q9H2F3 369 aa3.28□□□□□ -1.89
UBXN4-208ENST00000490163 IL21RQ9HBE5 538 aa3.28□□□□□ -1.89
UBXN4-208ENST00000490163 OSGIN1Q9UJX0 560 aa3.28□□□□□ -1.89
UBXN4-208ENST00000490163 DIP2CQ9Y2E4 1556 aa3.28□□□□□ -1.89
UBXN4-208ENST00000490163 PRDM15P57071 1507 aaPredicted RBP3.27□□□□□ -1.89
UBXN4-208ENST00000490163 NEO1Q92859 1461 aa3.27□□□□□ -1.89
UBXN4-208ENST00000490163 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.27□□□□□ -1.89
UBXN4-208ENST00000490163 TMEM232C9JQI7 657 aa3.27□□□□□ -1.89
UBXN4-208ENST00000490163 TJP3O95049 919 aa3.27□□□□□ -1.89
UBXN4-208ENST00000490163 AMPHP49418 695 aa3.27□□□□□ -1.89
UBXN4-208ENST00000490163 AARSP49588 968 aaKnown RBP eCLIP3.27□□□□□ -1.89
UBXN4-208ENST00000490163 MVDP53602 400 aa3.27□□□□□ -1.89
UBXN4-208ENST00000490163 ARHGEF7Q14155 803 aa3.27□□□□□ -1.89
UBXN4-208ENST00000490163 KCNJ12Q14500 433 aa3.27□□□□□ -1.89
UBXN4-208ENST00000490163 TMEM132BQ14DG7 1078 aa3.27□□□□□ -1.89
UBXN4-208ENST00000490163 SEC23BQ15437 767 aa3.27□□□□□ -1.89
UBXN4-208ENST00000490163 MSMPQ1L6U9 139 aa3.27□□□□□ -1.89
UBXN4-208ENST00000490163 FAM109BQ6ICB4 259 aaPredicted RBP3.27□□□□□ -1.89
UBXN4-208ENST00000490163 NCEH1Q6PIU2 408 aa3.27□□□□□ -1.89
UBXN4-208ENST00000490163 ZDHHC24Q6UX98 284 aa3.27□□□□□ -1.89
UBXN4-208ENST00000490163 CCDC28AQ8IWP9 274 aa3.27□□□□□ -1.89
UBXN4-208ENST00000490163 ADGRF2Q8IZF7 708 aa3.27□□□□□ -1.89
UBXN4-208ENST00000490163 CELF5Q8N6W0 485 aaKnown RBP3.27□□□□□ -1.89
UBXN4-208ENST00000490163 C12orf50Q8NA57 414 aaPredicted RBP3.27□□□□□ -1.89
UBXN4-208ENST00000490163 XXYLT1Q8NBI6 393 aa3.27□□□□□ -1.89
UBXN4-208ENST00000490163 TOR1AIP2Q8NFQ8 470 aa3.27□□□□□ -1.89
UBXN4-208ENST00000490163 SUN3Q8TAQ9 357 aa3.27□□□□□ -1.89
UBXN4-208ENST00000490163 IPO4Q8TEX9 1081 aaKnown RBP3.27□□□□□ -1.89
UBXN4-208ENST00000490163 P2RY11Q96G91 374 aa3.27□□□□□ -1.89
UBXN4-208ENST00000490163 C1orf43Q9BWL3 253 aa3.27□□□□□ -1.89
UBXN4-208ENST00000490163 C7orf69Q9H7B7 122 aa3.27□□□□□ -1.89
UBXN4-208ENST00000490163 RXFP1Q9HBX9 757 aa3.27□□□□□ -1.89
UBXN4-208ENST00000490163 MBNL1Q9NR56 388 aaKnown RBP3.27□□□□□ -1.89
UBXN4-208ENST00000490163 ABCF2Q9UG63 623 aa3.27□□□□□ -1.89
UBXN4-208ENST00000490163 ZNF142P52746 1687 aaPredicted RBP3.27□□□□□ -1.89
UBXN4-208ENST00000490163 PIK3C2BO00750 1634 aa3.27□□□□□ -1.89
UBXN4-208ENST00000490163 NCOA2Q15596 1464 aa3.27□□□□□ -1.89
UBXN4-208ENST00000490163 A0A1W2PR77 199 aa3.27□□□□□ -1.89
UBXN4-208ENST00000490163 TCERG1O14776 1098 aaKnown RBP3.27□□□□□ -1.89
UBXN4-208ENST00000490163 BCAT2O15382 392 aaPredicted RBP3.27□□□□□ -1.89
UBXN4-208ENST00000490163 SEPT4O43236 478 aa3.27□□□□□ -1.89
UBXN4-208ENST00000490163 MOSPD3O75425 235 aa3.27□□□□□ -1.89
UBXN4-208ENST00000490163 CBX7O95931 251 aa3.27□□□□□ -1.89
UBXN4-208ENST00000490163 FUCA1P04066 466 aa3.27□□□□□ -1.89
UBXN4-208ENST00000490163 F13BP05160 661 aa3.27□□□□□ -1.89
UBXN4-208ENST00000490163 CSH1P0DML2 217 aa3.27□□□□□ -1.89
UBXN4-208ENST00000490163 CSH2P0DML3 217 aa3.27□□□□□ -1.89
UBXN4-208ENST00000490163 KITP10721 976 aa3.27□□□□□ -1.89
UBXN4-208ENST00000490163 BRAFP15056 766 aa3.27□□□□□ -1.89
UBXN4-208ENST00000490163 SOX8P57073 446 aa3.27□□□□□ -1.89
UBXN4-208ENST00000490163 RAB32Q13637 225 aa3.27□□□□□ -1.89
UBXN4-208ENST00000490163 KHDC1LQ5JSQ8 128 aa3.27□□□□□ -1.89
UBXN4-208ENST00000490163 KRT79Q5XKE5 535 aa3.27□□□□□ -1.89
UBXN4-208ENST00000490163 ABLIM2Q6H8Q1 611 aa3.27□□□□□ -1.89
UBXN4-208ENST00000490163 JADE1Q6IE81 842 aa3.27□□□□□ -1.89
UBXN4-208ENST00000490163 C2CD5Q86YS7 1000 aa3.27□□□□□ -1.89
UBXN4-208ENST00000490163 EPHX4Q8IUS5 362 aa3.27□□□□□ -1.89
UBXN4-208ENST00000490163 REXO1L1PQ8IX06 675 aa3.27□□□□□ -1.89
UBXN4-208ENST00000490163 YAF2Q8IY57 180 aa3.27□□□□□ -1.89
UBXN4-208ENST00000490163 ZNF366Q8N895 744 aa3.27□□□□□ -1.89
UBXN4-208ENST00000490163 PIGOQ8TEQ8 1089 aa3.27□□□□□ -1.89
UBXN4-208ENST00000490163 ZNF606Q8WXB4 792 aa3.27□□□□□ -1.89
UBXN4-208ENST00000490163 PGAP3Q96FM1 320 aaPredicted RBP3.27□□□□□ -1.89
UBXN4-208ENST00000490163 SARS2Q9NP81 518 aaKnown RBP3.27□□□□□ -1.89
UBXN4-208ENST00000490163 SNX15Q9NRS6 342 aa3.27□□□□□ -1.89
UBXN4-208ENST00000490163 GJB4Q9NTQ9 266 aa3.27□□□□□ -1.89
UBXN4-208ENST00000490163 DUSP13Q9UII6 198 aa3.27□□□□□ -1.89
UBXN4-208ENST00000490163 GPATCH8Q9UKJ3 1502 aaKnown RBP3.27□□□□□ -1.89
UBXN4-208ENST00000490163 MBD5Q9P267 1494 aa3.27□□□□□ -1.89
UBXN4-208ENST00000490163 ASNA1O43681 348 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 RRP9O43818 475 aaKnown RBP3.26□□□□□ -1.89
UBXN4-208ENST00000490163 HOXB5P09067 269 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 ZFXP17010 805 aaPredicted RBP3.26□□□□□ -1.89
UBXN4-208ENST00000490163 XBP1P17861 261 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 KCNA3P22001 575 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 COL8A1P27658 744 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 TIA1P31483 386 aaKnown RBP eCLIP3.26□□□□□ -1.89
UBXN4-208ENST00000490163 GDNFP39905 211 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 POLD2P49005 469 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 SLC11A2P49281 568 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 CPT1AP50416 773 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 DLX2Q07687 328 aaPredicted RBP3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms