RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 DPTQ07507 201 aa4.58□□□□□ -1.68
ECHDC1-217ENST00000488087 STARD3Q14849 445 aa4.58□□□□□ -1.68
ECHDC1-217ENST00000488087 ZNF169Q14929 603 aaPredicted RBP4.58□□□□□ -1.68
ECHDC1-217ENST00000488087 GORABQ5T7V8 394 aa4.58□□□□□ -1.68
ECHDC1-217ENST00000488087 ZNF551Q7Z340 670 aaPredicted RBP4.58□□□□□ -1.68
ECHDC1-217ENST00000488087 SYTL1Q8IYJ3 562 aa4.58□□□□□ -1.68
ECHDC1-217ENST00000488087 SPICE1Q8N0Z3 855 aa4.58□□□□□ -1.68
ECHDC1-217ENST00000488087 SOCS4Q8WXH5 440 aa4.58□□□□□ -1.68
ECHDC1-217ENST00000488087 SNX27Q96L92 541 aa4.58□□□□□ -1.68
ECHDC1-217ENST00000488087 HIST1H2AAQ96QV6 131 aa4.58□□□□□ -1.68
ECHDC1-217ENST00000488087 SELENOOQ9BVL4 669 aa4.58□□□□□ -1.68
ECHDC1-217ENST00000488087 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.58□□□□□ -1.68
ECHDC1-217ENST00000488087 ZCWPW1Q9H0M4 648 aa4.58□□□□□ -1.68
ECHDC1-217ENST00000488087 SLC25A32Q9H2D1 315 aa4.58□□□□□ -1.68
ECHDC1-217ENST00000488087 MYH16Q9H6N6 1097 aa4.58□□□□□ -1.68
ECHDC1-217ENST00000488087 PLCB1Q9NQ66 1216 aa4.58□□□□□ -1.68
ECHDC1-217ENST00000488087 DNAJB11Q9UBS4 358 aa4.58□□□□□ -1.68
ECHDC1-217ENST00000488087 CAPN11Q9UMQ6 739 aa4.58□□□□□ -1.68
ECHDC1-217ENST00000488087 SH2B3Q9UQQ2 575 aa4.58□□□□□ -1.68
ECHDC1-217ENST00000488087 A0A087WZ62 844 aa4.57□□□□□ -1.68
ECHDC1-217ENST00000488087 FAM234BA2RU67 622 aa4.57□□□□□ -1.68
ECHDC1-217ENST00000488087 F5H423 210 aaPredicted RBP4.57□□□□□ -1.68
ECHDC1-217ENST00000488087 COQ9O75208 318 aa4.57□□□□□ -1.68
ECHDC1-217ENST00000488087 NTSR1P30989 418 aa4.57□□□□□ -1.68
ECHDC1-217ENST00000488087 CYP2C18P33260 490 aa4.57□□□□□ -1.68
ECHDC1-217ENST00000488087 PPM1AP35813 382 aa4.57□□□□□ -1.68
ECHDC1-217ENST00000488087 TECP42680 631 aa4.57□□□□□ -1.68
ECHDC1-217ENST00000488087 TPTEP56180 551 aa4.57□□□□□ -1.68
ECHDC1-217ENST00000488087 SIM1P81133 766 aaPredicted RBP4.57□□□□□ -1.68
ECHDC1-217ENST00000488087 MPEG1Q2M385 716 aa4.57□□□□□ -1.68
ECHDC1-217ENST00000488087 FAM153CQ494X1 144 aa4.57□□□□□ -1.68
ECHDC1-217ENST00000488087 FAXCQ5TGI0 409 aa4.57□□□□□ -1.68
ECHDC1-217ENST00000488087 MANEALQ5VSG8 457 aa4.57□□□□□ -1.68
ECHDC1-217ENST00000488087 MYLK4Q86YV6 388 aaPredicted RBP4.57□□□□□ -1.68
ECHDC1-217ENST00000488087 CAGE1Q8TC20 777 aa4.57□□□□□ -1.68
ECHDC1-217ENST00000488087 VN1R3Q9BXE9 311 aa4.57□□□□□ -1.68
ECHDC1-217ENST00000488087 ZBTB26Q9HCK0 441 aa4.57□□□□□ -1.68
ECHDC1-217ENST00000488087 TMOD4Q9NZQ9 345 aa4.57□□□□□ -1.68
ECHDC1-217ENST00000488087 ZMYND8Q9ULU4 1186 aaPredicted RBP4.57□□□□□ -1.68
ECHDC1-217ENST00000488087 DRG1Q9Y295 367 aaKnown RBP4.57□□□□□ -1.68
ECHDC1-217ENST00000488087 FER1L4A9Z1Z3 1794 aa4.56□□□□□ -1.68
ECHDC1-217ENST00000488087 WDR33Q9C0J8 1336 aaKnown RBP4.56□□□□□ -1.68
ECHDC1-217ENST00000488087 ABHD14A-ACY1A0A1B0GW23 586 aa4.56□□□□□ -1.68
ECHDC1-217ENST00000488087 ZAR1LA6NP61 321 aa4.56□□□□□ -1.68
ECHDC1-217ENST00000488087 QSOX1O00391 747 aa4.56□□□□□ -1.68
ECHDC1-217ENST00000488087 HNRNPDLO14979 420 aaKnown RBP4.56□□□□□ -1.68
ECHDC1-217ENST00000488087 AKAP8O43823 692 aaKnown RBP4.56□□□□□ -1.68
ECHDC1-217ENST00000488087 CCNT2O60583 730 aaKnown RBP4.56□□□□□ -1.68
ECHDC1-217ENST00000488087 LDHAP00338 332 aaKnown RBP4.56□□□□□ -1.68
ECHDC1-217ENST00000488087 SLPIP03973 132 aa4.56□□□□□ -1.68
ECHDC1-217ENST00000488087 ENGP17813 658 aa4.56□□□□□ -1.68
ECHDC1-217ENST00000488087 CCT8P50990 548 aa4.56□□□□□ -1.68
ECHDC1-217ENST00000488087 GPS1Q13098 491 aa4.56□□□□□ -1.68
ECHDC1-217ENST00000488087 CHAF1AQ13111 956 aaPredicted RBP4.56□□□□□ -1.68
ECHDC1-217ENST00000488087 TSTD2Q5T7W7 516 aa4.56□□□□□ -1.68
ECHDC1-217ENST00000488087 MRNIPQ6NTE8 343 aa4.56□□□□□ -1.68
ECHDC1-217ENST00000488087 USP17L6PQ6QN14 398 aa4.56□□□□□ -1.68
ECHDC1-217ENST00000488087 CLEC9AQ6UXN8 241 aa4.56□□□□□ -1.68
ECHDC1-217ENST00000488087 DPY19L3Q6ZPD9 716 aa4.56□□□□□ -1.68
ECHDC1-217ENST00000488087 PARS2Q7L3T8 475 aaKnown RBP4.56□□□□□ -1.68
ECHDC1-217ENST00000488087 GRASPQ7Z6J2 395 aaPredicted RBP4.56□□□□□ -1.68
ECHDC1-217ENST00000488087 RAB11FIP4Q86YS3 637 aa4.56□□□□□ -1.68
ECHDC1-217ENST00000488087 FSTL5Q8N475 847 aaPredicted RBP4.56□□□□□ -1.68
ECHDC1-217ENST00000488087 GLIS1Q8NBF1 620 aa4.56□□□□□ -1.68
ECHDC1-217ENST00000488087 GPR150Q8NGU9 434 aa4.56□□□□□ -1.68
ECHDC1-217ENST00000488087 MUL1Q969V5 352 aa4.56□□□□□ -1.68
ECHDC1-217ENST00000488087 PDLIM2Q96JY6 352 aa4.56□□□□□ -1.68
ECHDC1-217ENST00000488087 HAPLN3Q96S86 360 aa4.56□□□□□ -1.68
ECHDC1-217ENST00000488087 DUSP26Q9BV47 211 aa4.56□□□□□ -1.68
ECHDC1-217ENST00000488087 PCDHAC1Q9H158 963 aa4.56□□□□□ -1.68
ECHDC1-217ENST00000488087 RGL1Q9NZL6 768 aa4.56□□□□□ -1.68
ECHDC1-217ENST00000488087 FOXJ2Q9P0K8 574 aa4.56□□□□□ -1.68
ECHDC1-217ENST00000488087 TLK1Q9UKI8 766 aa4.56□□□□□ -1.68
ECHDC1-217ENST00000488087 SLC39A10Q9ULF5 831 aa4.56□□□□□ -1.68
ECHDC1-217ENST00000488087 RIPOR2Q9Y4F9 1068 aa4.56□□□□□ -1.68
ECHDC1-217ENST00000488087 GCOM1H8Y6P7 765 aaPredicted RBP4.55□□□□□ -1.68
ECHDC1-217ENST00000488087 AGPSO00116 658 aa4.55□□□□□ -1.68
ECHDC1-217ENST00000488087 AP4M1O00189 453 aa4.55□□□□□ -1.68
ECHDC1-217ENST00000488087 EXOC5O00471 708 aa4.55□□□□□ -1.68
ECHDC1-217ENST00000488087 MGST3O14880 152 aa4.55□□□□□ -1.68
ECHDC1-217ENST00000488087 ADAMTS3O15072 1205 aa4.55□□□□□ -1.68
ECHDC1-217ENST00000488087 PRKCBP05771 671 aa4.55□□□□□ -1.68
ECHDC1-217ENST00000488087 DLDP09622 509 aaKnown RBP4.55□□□□□ -1.68
ECHDC1-217ENST00000488087 TYRP1P17643 537 aa4.55□□□□□ -1.68
ECHDC1-217ENST00000488087 GABRB3P28472 473 aa4.55□□□□□ -1.68
ECHDC1-217ENST00000488087 RBL1P28749 1068 aa4.55□□□□□ -1.68
ECHDC1-217ENST00000488087 RARRES1P49788 294 aa4.55□□□□□ -1.68
ECHDC1-217ENST00000488087 TIRAPP58753 221 aa4.55□□□□□ -1.68
ECHDC1-217ENST00000488087 TIAL1Q01085 375 aaKnown RBP eCLIP4.55□□□□□ -1.68
ECHDC1-217ENST00000488087 TNFAIP2Q03169 654 aa4.55□□□□□ -1.68
ECHDC1-217ENST00000488087 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.55□□□□□ -1.68
ECHDC1-217ENST00000488087 AKNAD1Q5T1N1 836 aa4.55□□□□□ -1.68
ECHDC1-217ENST00000488087 C10orf62Q5T681 223 aaPredicted RBP4.55□□□□□ -1.68
ECHDC1-217ENST00000488087 GGT6Q6P531 493 aa4.55□□□□□ -1.68
ECHDC1-217ENST00000488087 TMED8Q6PL24 325 aaPredicted RBP4.55□□□□□ -1.68
ECHDC1-217ENST00000488087 OLFML1Q6UWY5 402 aa4.55□□□□□ -1.68
ECHDC1-217ENST00000488087 USP49Q70CQ1 688 aa4.55□□□□□ -1.68
ECHDC1-217ENST00000488087 CCDC28AQ8IWP9 274 aa4.55□□□□□ -1.68
ECHDC1-217ENST00000488087 SMC5Q8IY18 1101 aa4.55□□□□□ -1.68
ECHDC1-217ENST00000488087 C11orf44Q8N8P7 122 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms