RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 XPNPEP3Q9NQH7 507 aa4.47□□□□□ -1.69
HMGB1P36-201ENST00000487709 CHST12Q9NRB3 414 aa4.47□□□□□ -1.69
HMGB1P36-201ENST00000487709 CTTNBP2NLQ9P2B4 639 aa4.47□□□□□ -1.69
HMGB1P36-201ENST00000487709 MYO1AQ9UBC5 1043 aa4.47□□□□□ -1.69
HMGB1P36-201ENST00000487709 MID2Q9UJV3 735 aa4.47□□□□□ -1.69
HMGB1P36-201ENST00000487709 ST3GAL5Q9UNP4 418 aa4.47□□□□□ -1.69
HMGB1P36-201ENST00000487709 AOX1Q06278 1338 aa4.46□□□□□ -1.69
HMGB1P36-201ENST00000487709 F5H423 210 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P36-201ENST00000487709 ADAMTS3O15072 1205 aa4.46□□□□□ -1.7
HMGB1P36-201ENST00000487709 PIAS2O75928 621 aa4.46□□□□□ -1.7
HMGB1P36-201ENST00000487709 FGF18O76093 207 aa4.46□□□□□ -1.7
HMGB1P36-201ENST00000487709 NXPH3O95157 252 aa4.46□□□□□ -1.7
HMGB1P36-201ENST00000487709 PRR35P0CG20 571 aa4.46□□□□□ -1.7
HMGB1P36-201ENST00000487709 PTDSS1P48651 473 aaKnown RBP4.46□□□□□ -1.7
HMGB1P36-201ENST00000487709 PDE6CP51160 858 aa4.46□□□□□ -1.7
HMGB1P36-201ENST00000487709 NXPH1P58417 271 aa4.46□□□□□ -1.7
HMGB1P36-201ENST00000487709 MC2RQ01718 297 aa4.46□□□□□ -1.7
HMGB1P36-201ENST00000487709 TNFAIP2Q03169 654 aa4.46□□□□□ -1.7
HMGB1P36-201ENST00000487709 CHAF1AQ13111 956 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P36-201ENST00000487709 PMS2P11Q13670 270 aa4.46□□□□□ -1.7
HMGB1P36-201ENST00000487709 RBM20Q5T481 1227 aaKnown RBP4.46□□□□□ -1.7
HMGB1P36-201ENST00000487709 CERCAMQ5T4B2 595 aa4.46□□□□□ -1.7
HMGB1P36-201ENST00000487709 ARHGAP40Q5TG30 622 aa4.46□□□□□ -1.7
HMGB1P36-201ENST00000487709 RGS7BPQ6MZT1 257 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P36-201ENST00000487709 C11orf87Q6NUJ2 197 aa4.46□□□□□ -1.7
HMGB1P36-201ENST00000487709 XRRA1Q6P2D8 792 aa4.46□□□□□ -1.7
HMGB1P36-201ENST00000487709 VWA1Q6PCB0 445 aa4.46□□□□□ -1.7
HMGB1P36-201ENST00000487709 CATSPERGQ6ZRH7 1159 aa4.46□□□□□ -1.7
HMGB1P36-201ENST00000487709 KRT73Q86Y46 540 aa4.46□□□□□ -1.7
HMGB1P36-201ENST00000487709 SYTL1Q8IYJ3 562 aa4.46□□□□□ -1.7
HMGB1P36-201ENST00000487709 VPS37AQ8NEZ2 397 aa4.46□□□□□ -1.7
HMGB1P36-201ENST00000487709 TOR1AIP2Q8NFQ8 470 aa4.46□□□□□ -1.7
HMGB1P36-201ENST00000487709 BPIFB1Q8TDL5 484 aa4.46□□□□□ -1.7
HMGB1P36-201ENST00000487709 FAM136AQ96C01 138 aa4.46□□□□□ -1.7
HMGB1P36-201ENST00000487709 LRRC46Q96FV0 321 aa4.46□□□□□ -1.7
HMGB1P36-201ENST00000487709 MESP1Q9BRJ9 268 aa4.46□□□□□ -1.7
HMGB1P36-201ENST00000487709 POLR3GLQ9BT43 218 aa4.46□□□□□ -1.7
HMGB1P36-201ENST00000487709 KRTAP2-2Q9BYT5 123 aa4.46□□□□□ -1.7
HMGB1P36-201ENST00000487709 CHST8Q9H2A9 424 aa4.46□□□□□ -1.7
HMGB1P36-201ENST00000487709 TBC1D23Q9NUY8 699 aa4.46□□□□□ -1.7
HMGB1P36-201ENST00000487709 FLRT1Q9NZU1 646 aa4.46□□□□□ -1.7
HMGB1P36-201ENST00000487709 TAGLN3Q9UI15 199 aa4.46□□□□□ -1.7
HMGB1P36-201ENST00000487709 CDY1Q9Y6F8 540 aa4.46□□□□□ -1.7
HMGB1P36-201ENST00000487709 ZNF521Q96K83 1311 aa4.46□□□□□ -1.7
HMGB1P36-201ENST00000487709 ABHD14A-ACY1A0A1B0GW23 586 aa4.45□□□□□ -1.7
HMGB1P36-201ENST00000487709 hCG_1642624A0A1W2PR95 340 aa4.45□□□□□ -1.7
HMGB1P36-201ENST00000487709 LINC00473A8K010 186 aa4.45□□□□□ -1.7
HMGB1P36-201ENST00000487709 TMEM233B4DJY2 109 aa4.45□□□□□ -1.7
HMGB1P36-201ENST00000487709 PSMD9O00233 223 aa4.45□□□□□ -1.7
HMGB1P36-201ENST00000487709 AREL1O15033 823 aa4.45□□□□□ -1.7
HMGB1P36-201ENST00000487709 MPPED1O15442 326 aa4.45□□□□□ -1.7
HMGB1P36-201ENST00000487709 TLR5O60602 858 aa4.45□□□□□ -1.7
HMGB1P36-201ENST00000487709 SNX2O60749 519 aa4.45□□□□□ -1.7
HMGB1P36-201ENST00000487709 EEF1GP26641 437 aaKnown RBP4.45□□□□□ -1.7
HMGB1P36-201ENST00000487709 PPM1AP35813 382 aa4.45□□□□□ -1.7
HMGB1P36-201ENST00000487709 COPAP53621 1224 aa4.45□□□□□ -1.7
HMGB1P36-201ENST00000487709 SLC10A2Q12908 348 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P36-201ENST00000487709 GRAMD1BQ3KR37 738 aa4.45□□□□□ -1.7
HMGB1P36-201ENST00000487709 HIBCHQ6NVY1 386 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P36-201ENST00000487709 TTC30AQ86WT1 665 aa4.45□□□□□ -1.7
HMGB1P36-201ENST00000487709 PGBD1Q96JS3 809 aa4.45□□□□□ -1.7
HMGB1P36-201ENST00000487709 ZNF48Q96MX3 618 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P36-201ENST00000487709 ALG8Q9BVK2 526 aa4.45□□□□□ -1.7
HMGB1P36-201ENST00000487709 ACTRT3Q9BYD9 372 aa4.45□□□□□ -1.7
HMGB1P36-201ENST00000487709 TM7SF3Q9NS93 570 aa4.45□□□□□ -1.7
HMGB1P36-201ENST00000487709 TMOD4Q9NZQ9 345 aa4.45□□□□□ -1.7
HMGB1P36-201ENST00000487709 ADAM21Q9UKJ8 722 aa4.45□□□□□ -1.7
HMGB1P36-201ENST00000487709 PLEKHD1A6NEE1 506 aa4.44□□□□□ -1.7
HMGB1P36-201ENST00000487709 LINC01548A6NM66 108 aa4.44□□□□□ -1.7
HMGB1P36-201ENST00000487709 ADM5C9JUS6 153 aa4.44□□□□□ -1.7
HMGB1P36-201ENST00000487709 F8W8V4 182 aa4.44□□□□□ -1.7
HMGB1P36-201ENST00000487709 H7C4K7 107 aa4.44□□□□□ -1.7
HMGB1P36-201ENST00000487709 DCLK1O15075 740 aa4.44□□□□□ -1.7
HMGB1P36-201ENST00000487709 RRP9O43818 475 aaKnown RBP4.44□□□□□ -1.7
HMGB1P36-201ENST00000487709 CCNT2O60583 730 aaKnown RBP4.44□□□□□ -1.7
HMGB1P36-201ENST00000487709 SRGAP2O75044 1071 aa4.44□□□□□ -1.7
HMGB1P36-201ENST00000487709 COQ9O75208 318 aa4.44□□□□□ -1.7
HMGB1P36-201ENST00000487709 SKAP2O75563 359 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P36-201ENST00000487709 CHRM2P08172 466 aa4.44□□□□□ -1.7
HMGB1P36-201ENST00000487709 HARSP12081 509 aaKnown RBP4.44□□□□□ -1.7
HMGB1P36-201ENST00000487709 ABCB4P21439 1286 aa4.44□□□□□ -1.7
HMGB1P36-201ENST00000487709 EPHA3P29320 983 aa4.44□□□□□ -1.7
HMGB1P36-201ENST00000487709 DGKEP52429 567 aa4.44□□□□□ -1.7
HMGB1P36-201ENST00000487709 ZNF134P52741 427 aa4.44□□□□□ -1.7
HMGB1P36-201ENST00000487709 SSBP2P81877 361 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P36-201ENST00000487709 ICA1Q05084 483 aa4.44□□□□□ -1.7
HMGB1P36-201ENST00000487709 MYO1EQ12965 1108 aa4.44□□□□□ -1.7
HMGB1P36-201ENST00000487709 FHL1Q13642 323 aa4.44□□□□□ -1.7
HMGB1P36-201ENST00000487709 CCNIQ14094 377 aa4.44□□□□□ -1.7
HMGB1P36-201ENST00000487709 KRT72Q14CN4 511 aa4.44□□□□□ -1.7
HMGB1P36-201ENST00000487709 ZRSR2Q15696 482 aaKnown RBP4.44□□□□□ -1.7
HMGB1P36-201ENST00000487709 SLC35G1Q2M3R5 365 aa4.44□□□□□ -1.7
HMGB1P36-201ENST00000487709 NBPF8Q3BBV2 869 aa4.44□□□□□ -1.7
HMGB1P36-201ENST00000487709 PLAC9Q5JTB6 97 aa4.44□□□□□ -1.7
HMGB1P36-201ENST00000487709 ARL6IP4Q66PJ3 421 aaKnown RBP4.44□□□□□ -1.7
HMGB1P36-201ENST00000487709 ZNF782Q6ZMW2 699 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P36-201ENST00000487709 RASAL3Q86YV0 1011 aa4.44□□□□□ -1.7
HMGB1P36-201ENST00000487709 ZNF527Q8NB42 609 aa4.44□□□□□ -1.7
HMGB1P36-201ENST00000487709 NGDNQ8NEJ9 315 aaKnown RBP4.44□□□□□ -1.7
HMGB1P36-201ENST00000487709 SLC30A5Q8TAD4 765 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms