RNA–Protein interactions for RNA: ENST00000487625.1

USP9X-208, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 2

Gene USP9X, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-208ENST00000487625 SHROOM4Q9ULL8 1493 aa2.86□□□□□ -1.95
USP9X-208ENST00000487625 LOC105371045A0A1W2PR82 267 aa2.86□□□□□ -1.95
USP9X-208ENST00000487625 DCLK1O15075 740 aa2.86□□□□□ -1.95
USP9X-208ENST00000487625 CLSTN1O94985 981 aa2.86□□□□□ -1.95
USP9X-208ENST00000487625 PAPSS2O95340 614 aaPredicted RBP2.86□□□□□ -1.95
USP9X-208ENST00000487625 AHSGP02765 367 aa2.86□□□□□ -1.95
USP9X-208ENST00000487625 FTH1P19P0C7X4 201 aa2.86□□□□□ -1.95
USP9X-208ENST00000487625 HOXA11P31270 313 aaPredicted RBP2.86□□□□□ -1.95
USP9X-208ENST00000487625 GUCY2FP51841 1108 aa2.86□□□□□ -1.95
USP9X-208ENST00000487625 ITKQ08881 620 aa2.86□□□□□ -1.95
USP9X-208ENST00000487625 NOGQ13253 232 aa2.86□□□□□ -1.95
USP9X-208ENST00000487625 SEC23BQ15437 767 aa2.86□□□□□ -1.95
USP9X-208ENST00000487625 PRTGQ2VWP7 1150 aa2.86□□□□□ -1.95
USP9X-208ENST00000487625 FAM76BQ5HYJ3 339 aa2.86□□□□□ -1.95
USP9X-208ENST00000487625 EFCAB2Q5VUJ9 269 aa2.86□□□□□ -1.95
USP9X-208ENST00000487625 PNMA8AQ86V59 439 aaPredicted RBP2.86□□□□□ -1.95
USP9X-208ENST00000487625 PPP1R3BQ86XI6 285 aa2.86□□□□□ -1.95
USP9X-208ENST00000487625 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP2.86□□□□□ -1.95
USP9X-208ENST00000487625 C3orf20Q8ND61 904 aa2.86□□□□□ -1.95
USP9X-208ENST00000487625 FAM46DQ8NEK8 389 aa2.86□□□□□ -1.95
USP9X-208ENST00000487625 TNPO1Q92973 898 aaKnown RBP2.86□□□□□ -1.95
USP9X-208ENST00000487625 SPRY4Q9C004 299 aa2.86□□□□□ -1.95
USP9X-208ENST00000487625 MRPL46Q9H2W6 279 aaKnown RBP2.86□□□□□ -1.95
USP9X-208ENST00000487625 ASIC5Q9NY37 505 aa2.86□□□□□ -1.95
USP9X-208ENST00000487625 ABCF2Q9UG63 623 aa2.86□□□□□ -1.95
USP9X-208ENST00000487625 ZDHHC8Q9ULC8 765 aa2.86□□□□□ -1.95
USP9X-208ENST00000487625 PCDHA7Q9UN72 937 aa2.86□□□□□ -1.95
USP9X-208ENST00000487625 LDLRP01130 860 aa2.85□□□□□ -1.95
USP9X-208ENST00000487625 PIM1P11309 404 aaPredicted RBP2.85□□□□□ -1.95
USP9X-208ENST00000487625 FPR3P25089 353 aa2.85□□□□□ -1.95
USP9X-208ENST00000487625 COMPP49747 757 aaPredicted RBP2.85□□□□□ -1.95
USP9X-208ENST00000487625 ENTPD1P49961 510 aa2.85□□□□□ -1.95
USP9X-208ENST00000487625 PTPN21Q16825 1174 aa2.85□□□□□ -1.95
USP9X-208ENST00000487625 HEATR3Q7Z4Q2 680 aa2.85□□□□□ -1.95
USP9X-208ENST00000487625 ABHD11Q8NFV4 315 aa2.85□□□□□ -1.95
USP9X-208ENST00000487625 ADAMTS18Q8TE60 1221 aa2.85□□□□□ -1.95
USP9X-208ENST00000487625 ATG4AQ8WYN0 398 aa2.85□□□□□ -1.95
USP9X-208ENST00000487625 SLC46A1Q96NT5 459 aa2.85□□□□□ -1.95
USP9X-208ENST00000487625 TTYH3Q9C0H2 523 aa2.85□□□□□ -1.95
USP9X-208ENST00000487625 SIK2Q9H0K1 926 aa2.85□□□□□ -1.95
USP9X-208ENST00000487625 WDCPQ9H6R7 721 aa2.85□□□□□ -1.95
USP9X-208ENST00000487625 ST6GALNAC1Q9NSC7 600 aaPredicted RBP2.85□□□□□ -1.95
USP9X-208ENST00000487625 HESX1Q9UBX0 185 aa2.85□□□□□ -1.95
USP9X-208ENST00000487625 FEZ2Q9UHY8 353 aaPredicted RBP2.85□□□□□ -1.95
USP9X-208ENST00000487625 KCNG2Q9UJ96 466 aa2.85□□□□□ -1.95
USP9X-208ENST00000487625 SERTAD3Q9UJW9 196 aa2.85□□□□□ -1.95
USP9X-208ENST00000487625 POLHQ9Y253 713 aa2.85□□□□□ -1.95
USP9X-208ENST00000487625 SSX2IPQ9Y2D8 614 aa2.85□□□□□ -1.95
USP9X-208ENST00000487625 TNKSO95271 1327 aa2.85□□□□□ -1.95
USP9X-208ENST00000487625 A0A1B0GUV1 79 aa2.84□□□□□ -1.95
USP9X-208ENST00000487625 ARIH2O95376 493 aa2.84□□□□□ -1.95
USP9X-208ENST00000487625 GNAI2P04899 355 aa2.84□□□□□ -1.95
USP9X-208ENST00000487625 HOXB2P14652 356 aa2.84□□□□□ -1.95
USP9X-208ENST00000487625 TYRP14679 529 aa2.84□□□□□ -1.95
USP9X-208ENST00000487625 CDK11BP21127 795 aaKnown RBP2.84□□□□□ -1.95
USP9X-208ENST00000487625 MAP2K6P52564 334 aa2.84□□□□□ -1.95
USP9X-208ENST00000487625 HK3P52790 923 aa2.84□□□□□ -1.95
USP9X-208ENST00000487625 KRTAP12-2P59991 146 aa2.84□□□□□ -1.95
USP9X-208ENST00000487625 EXOSC9Q06265 439 aaKnown RBP2.84□□□□□ -1.95
USP9X-208ENST00000487625 FAM50AQ14320 339 aaKnown RBP2.84□□□□□ -1.95
USP9X-208ENST00000487625 AWAT1Q58HT5 328 aa2.84□□□□□ -1.95
USP9X-208ENST00000487625 RNASE12Q5GAN4 147 aaKnown RBP2.84□□□□□ -1.95
USP9X-208ENST00000487625 TMTC4Q5T4D3 741 aa2.84□□□□□ -1.95
USP9X-208ENST00000487625 FAM160B1Q5W0V3 765 aa2.84□□□□□ -1.95
USP9X-208ENST00000487625 ICE2Q659A1 982 aa2.84□□□□□ -1.95
USP9X-208ENST00000487625 SLC13A1Q9BZW2 595 aa2.84□□□□□ -1.95
USP9X-208ENST00000487625 EGLN1Q9GZT9 426 aa2.84□□□□□ -1.95
USP9X-208ENST00000487625 TMX1Q9H3N1 280 aa2.84□□□□□ -1.95
USP9X-208ENST00000487625 SPC25Q9HBM1 224 aa2.84□□□□□ -1.95
USP9X-208ENST00000487625 PCDHA1Q9Y5I3 950 aa2.84□□□□□ -1.95
USP9X-208ENST00000487625 SLC16A6O15403 523 aa2.83□□□□□ -1.96
USP9X-208ENST00000487625 RNF8O76064 485 aa2.83□□□□□ -1.96
USP9X-208ENST00000487625 TBX6O95947 436 aaPredicted RBP2.83□□□□□ -1.96
USP9X-208ENST00000487625 FTLP02792 175 aaPredicted RBP2.83□□□□□ -1.96
USP9X-208ENST00000487625 HDCP19113 662 aa2.83□□□□□ -1.96
USP9X-208ENST00000487625 PDCP20941 246 aa2.83□□□□□ -1.96
USP9X-208ENST00000487625 PPIFP30405 207 aaKnown RBP2.83□□□□□ -1.96
USP9X-208ENST00000487625 LOXL3P58215 753 aa2.83□□□□□ -1.96
USP9X-208ENST00000487625 EVA1CP58658 441 aa2.83□□□□□ -1.96
USP9X-208ENST00000487625 LILRA4P59901 499 aa2.83□□□□□ -1.96
USP9X-208ENST00000487625 ERVFC1-1P60608 527 aa2.83□□□□□ -1.96
USP9X-208ENST00000487625 RBM39Q14498 530 aaKnown RBP2.83□□□□□ -1.96
USP9X-208ENST00000487625 LONRF3Q496Y0 759 aa2.83□□□□□ -1.96
USP9X-208ENST00000487625 MANEAQ5SRI9 462 aa2.83□□□□□ -1.96
USP9X-208ENST00000487625 L1TD1Q5T7N2 865 aaKnown RBP2.83□□□□□ -1.96
USP9X-208ENST00000487625 ARHGAP40Q5TG30 622 aa2.83□□□□□ -1.96
USP9X-208ENST00000487625 ANO7Q6IWH7 933 aa2.83□□□□□ -1.96
USP9X-208ENST00000487625 SH2D6Q7Z4S9 175 aa2.83□□□□□ -1.96
USP9X-208ENST00000487625 ARHGAP30Q7Z6I6 1101 aaPredicted RBP2.83□□□□□ -1.96
USP9X-208ENST00000487625 MIER2Q8N344 545 aa2.83□□□□□ -1.96
USP9X-208ENST00000487625 PRR18Q8N4B5 295 aa2.83□□□□□ -1.96
USP9X-208ENST00000487625 CPA6Q8N4T0 437 aa2.83□□□□□ -1.96
USP9X-208ENST00000487625 CELF5Q8N6W0 485 aaKnown RBP2.83□□□□□ -1.96
USP9X-208ENST00000487625 PRPF38AQ8NAV1 312 aaKnown RBP2.83□□□□□ -1.96
USP9X-208ENST00000487625 WIPF2Q8TF74 440 aaPredicted RBP2.83□□□□□ -1.96
USP9X-208ENST00000487625 GLG1Q92896 1179 aa2.83□□□□□ -1.96
USP9X-208ENST00000487625 R3HDM4Q96D70 268 aa2.83□□□□□ -1.96
USP9X-208ENST00000487625 HES6Q96HZ4 224 aa2.83□□□□□ -1.96
USP9X-208ENST00000487625 FYTTD1Q96QD9 318 aaKnown RBP2.83□□□□□ -1.96
USP9X-208ENST00000487625 LMBRD1Q9NUN5 540 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms