RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 CITO14578 2027 aa27.26■■□□□ 1.95
HLA-C-208ENST00000487245 IQCA1LA6NCM1 817 aa27.25■■□□□ 1.95
HLA-C-208ENST00000487245 C2CD4BA6NLJ0 364 aa27.25■■□□□ 1.95
HLA-C-208ENST00000487245 ITGBL1O95965 494 aaPredicted RBP27.25■■□□□ 1.95
HLA-C-208ENST00000487245 SMPD1P17405 629 aa27.25■■□□□ 1.95
HLA-C-208ENST00000487245 DNAJC3Q13217 504 aa27.25■■□□□ 1.95
HLA-C-208ENST00000487245 GRB14Q14449 540 aa27.25■■□□□ 1.95
HLA-C-208ENST00000487245 CEP57Q86XR8 500 aa27.25■■□□□ 1.95
HLA-C-208ENST00000487245 ANKMY2Q8IV38 441 aa27.25■■□□□ 1.95
HLA-C-208ENST00000487245 C4orf33Q8N1A6 199 aa27.25■■□□□ 1.95
HLA-C-208ENST00000487245 MZB1Q8WU39 189 aa27.25■■□□□ 1.95
HLA-C-208ENST00000487245 HSPH1Q92598 858 aa27.25■■□□□ 1.95
HLA-C-208ENST00000487245 GBA2Q9HCG7 927 aaPredicted RBP27.25■■□□□ 1.95
HLA-C-208ENST00000487245 MCF2LO15068 1137 aa27.25■■□□□ 1.95
HLA-C-208ENST00000487245 PDGFRAP16234 1089 aa27.25■■□□□ 1.95
HLA-C-208ENST00000487245 EIF3EP60228 445 aaKnown RBP27.25■■□□□ 1.95
HLA-C-208ENST00000487245 SETDB1Q15047 1291 aa27.25■■□□□ 1.95
HLA-C-208ENST00000487245 MSS51Q4VC12 460 aa27.25■■□□□ 1.95
HLA-C-208ENST00000487245 HHATQ5VTY9 493 aa27.25■■□□□ 1.95
HLA-C-208ENST00000487245 GPR142Q7Z601 462 aa27.25■■□□□ 1.95
HLA-C-208ENST00000487245 RXFP2Q8WXD0 754 aa27.25■■□□□ 1.95
HLA-C-208ENST00000487245 MAML3Q96JK9 1138 aa27.25■■□□□ 1.95
HLA-C-208ENST00000487245 A0A1W2PPM1 405 aa27.24■■□□□ 1.95
HLA-C-208ENST00000487245 DPYSL4O14531 572 aa27.24■■□□□ 1.95
HLA-C-208ENST00000487245 DCTN3O75935 186 aa27.24■■□□□ 1.95
HLA-C-208ENST00000487245 DESP17661 470 aa27.24■■□□□ 1.95
HLA-C-208ENST00000487245 CYP3A5P20815 502 aa27.24■■□□□ 1.95
HLA-C-208ENST00000487245 STIP1P31948 543 aaKnown RBP27.24■■□□□ 1.95
HLA-C-208ENST00000487245 DPH6Q7L8W6 267 aa27.24■■□□□ 1.95
HLA-C-208ENST00000487245 ZNF398Q8TD17 642 aa27.24■■□□□ 1.95
HLA-C-208ENST00000487245 WDR83Q9BRX9 315 aaKnown RBP27.24■■□□□ 1.95
HLA-C-208ENST00000487245 SYT17Q9BSW7 474 aa27.24■■□□□ 1.95
HLA-C-208ENST00000487245 EBF2Q9HAK2 575 aa27.24■■□□□ 1.95
HLA-C-208ENST00000487245 CYLDQ9NQC7 956 aa27.24■■□□□ 1.95
HLA-C-208ENST00000487245 SAE1Q9UBE0 346 aaPredicted RBP27.24■■□□□ 1.95
HLA-C-208ENST00000487245 GLTPD2A6NH11 291 aa27.23■■□□□ 1.95
HLA-C-208ENST00000487245 NPTXRO95502 500 aa27.23■■□□□ 1.95
HLA-C-208ENST00000487245 KRT16P08779 473 aa27.23■■□□□ 1.95
HLA-C-208ENST00000487245 CD48P09326 243 aa27.23■■□□□ 1.95
HLA-C-208ENST00000487245 ALDH3A1P30838 453 aa27.23■■□□□ 1.95
HLA-C-208ENST00000487245 GOLGA7BQ2TAP0 167 aa27.23■■□□□ 1.95
HLA-C-208ENST00000487245 SLC27A1Q6PCB7 646 aa27.23■■□□□ 1.95
HLA-C-208ENST00000487245 FAM183BPQ6ZVS7 135 aa27.23■■□□□ 1.95
HLA-C-208ENST00000487245 MAP7D3Q8IWC1 876 aa27.23■■□□□ 1.95
HLA-C-208ENST00000487245 UNC45BQ8IWX7 931 aa27.23■■□□□ 1.95
HLA-C-208ENST00000487245 PDIK1LQ8N165 341 aa27.23■■□□□ 1.95
HLA-C-208ENST00000487245 LRRC52Q8N7C0 313 aa27.23■■□□□ 1.95
HLA-C-208ENST00000487245 BEST2Q8NFU1 509 aa27.23■■□□□ 1.95
HLA-C-208ENST00000487245 PAFAH2Q99487 392 aa27.23■■□□□ 1.95
HLA-C-208ENST00000487245 TINF2Q9BSI4 451 aa27.23■■□□□ 1.95
HLA-C-208ENST00000487245 ADAMTS10Q9H324 1103 aa27.23■■□□□ 1.95
HLA-C-208ENST00000487245 GOLGA8MH3BSY2 632 aa27.23■■□□□ 1.95
HLA-C-208ENST00000487245 TM9SF1O15321 606 aa27.23■■□□□ 1.95
HLA-C-208ENST00000487245 PRPSAP2O60256 369 aa27.23■■□□□ 1.95
HLA-C-208ENST00000487245 BANF1O75531 89 aa27.23■■□□□ 1.95
HLA-C-208ENST00000487245 WFS1O76024 890 aa27.23■■□□□ 1.95
HLA-C-208ENST00000487245 RNASELQ05823 741 aaKnown RBP27.23■■□□□ 1.95
HLA-C-208ENST00000487245 PDK2Q15119 407 aa27.23■■□□□ 1.95
HLA-C-208ENST00000487245 PARP6Q2NL67 630 aa27.23■■□□□ 1.95
HLA-C-208ENST00000487245 BOLA3Q53S33 107 aa27.23■■□□□ 1.95
HLA-C-208ENST00000487245 CAPN12Q6ZSI9 719 aa27.23■■□□□ 1.95
HLA-C-208ENST00000487245 FBXO36Q8NEA4 188 aa27.23■■□□□ 1.95
HLA-C-208ENST00000487245 USP6NLQ92738 828 aa27.23■■□□□ 1.95
HLA-C-208ENST00000487245 CALN1Q9BXU9 219 aa27.23■■□□□ 1.95
HLA-C-208ENST00000487245 MYLK2Q9H1R3 596 aa27.23■■□□□ 1.95
HLA-C-208ENST00000487245 SCN4AP35499 1836 aa27.23■■□□□ 1.95
HLA-C-208ENST00000487245 KAT6AQ92794 2004 aa27.23■■□□□ 1.95
HLA-C-208ENST00000487245 E5RJQ4 531 aa27.22■■□□□ 1.95
HLA-C-208ENST00000487245 TMEM63AO94886 807 aa27.22■■□□□ 1.95
HLA-C-208ENST00000487245 PFKMP08237 780 aa27.22■■□□□ 1.95
HLA-C-208ENST00000487245 SSTR1P30872 391 aa27.22■■□□□ 1.95
HLA-C-208ENST00000487245 MSH2P43246 934 aa27.22■■□□□ 1.95
HLA-C-208ENST00000487245 GAD2Q05329 585 aa27.22■■□□□ 1.95
HLA-C-208ENST00000487245 C3orf62Q6ZUJ4 267 aa27.22■■□□□ 1.95
HLA-C-208ENST00000487245 PLEKHH3Q7Z736 793 aa27.22■■□□□ 1.95
HLA-C-208ENST00000487245 UNC93AQ86WB7 457 aa27.22■■□□□ 1.95
HLA-C-208ENST00000487245 DCAKDQ8WVC6 231 aa27.22■■□□□ 1.95
HLA-C-208ENST00000487245 C10orf82Q8WW14 230 aa27.22■■□□□ 1.95
HLA-C-208ENST00000487245 BRI3BPQ8WY22 251 aa27.22■■□□□ 1.95
HLA-C-208ENST00000487245 SNX27Q96L92 541 aa27.22■■□□□ 1.95
HLA-C-208ENST00000487245 RAB3IPQ96QF0 476 aaPredicted RBP27.22■■□□□ 1.95
HLA-C-208ENST00000487245 LRMDAQ9H2I8 198 aa27.22■■□□□ 1.95
HLA-C-208ENST00000487245 SLC5A4Q9NY91 659 aa27.22■■□□□ 1.95
HLA-C-208ENST00000487245 CHKBQ9Y259 395 aa27.22■■□□□ 1.95
HLA-C-208ENST00000487245 RALGAPA2Q2PPJ7 1873 aa27.22■■□□□ 1.95
HLA-C-208ENST00000487245 ATP2A2P16615 1042 aaKnown RBP27.21■■□□□ 1.95
HLA-C-208ENST00000487245 CCND1P24385 295 aa27.21■■□□□ 1.95
HLA-C-208ENST00000487245 GBP2P32456 591 aaPredicted RBP27.21■■□□□ 1.95
HLA-C-208ENST00000487245 CDH6P55285 790 aa27.21■■□□□ 1.95
HLA-C-208ENST00000487245 DPYSL3Q14195 570 aa27.21■■□□□ 1.95
HLA-C-208ENST00000487245 NOMO1Q15155 1222 aa27.21■■□□□ 1.95
HLA-C-208ENST00000487245 LVRNQ6Q4G3 990 aa27.21■■□□□ 1.95
HLA-C-208ENST00000487245 CATSPER4Q7RTX7 472 aa27.21■■□□□ 1.95
HLA-C-208ENST00000487245 VSIG1Q86XK7 387 aa27.21■■□□□ 1.95
HLA-C-208ENST00000487245 STK32AQ8WU08 396 aa27.21■■□□□ 1.95
HLA-C-208ENST00000487245 TEKT4Q8WW24 435 aa27.21■■□□□ 1.95
HLA-C-208ENST00000487245 ZNF75CPQ92670 426 aaPredicted RBP27.21■■□□□ 1.95
HLA-C-208ENST00000487245 MYCBPQ99417 103 aaPredicted RBP27.21■■□□□ 1.95
HLA-C-208ENST00000487245 SLC4A5Q9BY07 1137 aa27.21■■□□□ 1.95
HLA-C-208ENST00000487245 RBP3P10745 1247 aa27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms