RNA–Protein interactions for RNA: ENST00000484252.5

LIMS2-215, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,099 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-215ENST00000484252 C11orf91Q3C1V1 193 aa20.53■□□□□ 0.88
LIMS2-215ENST00000484252 JADE1Q6IE81 842 aa20.53■□□□□ 0.88
LIMS2-215ENST00000484252 CLNKQ7Z7G1 428 aa20.53■□□□□ 0.88
LIMS2-215ENST00000484252 LONP2Q86WA8 852 aa20.53■□□□□ 0.88
LIMS2-215ENST00000484252 DHX37Q8IY37 1157 aaKnown RBP20.53■□□□□ 0.88
LIMS2-215ENST00000484252 TMEM192Q8IY95 271 aa20.53■□□□□ 0.88
LIMS2-215ENST00000484252 CXorf38Q8TB03 319 aa20.53■□□□□ 0.88
LIMS2-215ENST00000484252 HEXIM2Q96MH2 286 aaKnown RBP20.53■□□□□ 0.88
LIMS2-215ENST00000484252 SPATA33Q96N06 139 aa20.53■□□□□ 0.88
LIMS2-215ENST00000484252 RNPEPL1Q9HAU8 725 aa20.53■□□□□ 0.88
LIMS2-215ENST00000484252 HMGXB4Q9UGU5 601 aa20.53■□□□□ 0.88
LIMS2-215ENST00000484252 WDR91A4D1P6 747 aa20.52■□□□□ 0.88
LIMS2-215ENST00000484252 C2CD4BA6NLJ0 364 aa20.52■□□□□ 0.88
LIMS2-215ENST00000484252 KBTBD13C9JR72 458 aa20.52■□□□□ 0.88
LIMS2-215ENST00000484252 GOLGA8RI6L899 631 aa20.52■□□□□ 0.88
LIMS2-215ENST00000484252 GPR25O00155 361 aa20.52■□□□□ 0.88
LIMS2-215ENST00000484252 SOCS7O14512 581 aa20.52■□□□□ 0.88
LIMS2-215ENST00000484252 FAM155BO75949 473 aa20.52■□□□□ 0.88
LIMS2-215ENST00000484252 ZNF449Q6P9G9 518 aa20.52■□□□□ 0.88
LIMS2-215ENST00000484252 CDR2LQ86X02 465 aaPredicted RBP20.52■□□□□ 0.88
LIMS2-215ENST00000484252 IGDCC3Q8IVU1 814 aa20.52■□□□□ 0.88
LIMS2-215ENST00000484252 FAM13CQ8NE31 585 aa20.52■□□□□ 0.88
LIMS2-215ENST00000484252 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.52■□□□□ 0.88
LIMS2-215ENST00000484252 FAF2Q96CS3 445 aa20.52■□□□□ 0.88
LIMS2-215ENST00000484252 RTP4Q96DX8 246 aa20.52■□□□□ 0.88
LIMS2-215ENST00000484252 TSSK1BQ9BXA7 367 aa20.52■□□□□ 0.88
LIMS2-215ENST00000484252 H7C0C1 242 aa20.52■□□□□ 0.87
LIMS2-215ENST00000484252 PRPSAP2O60256 369 aa20.52■□□□□ 0.87
LIMS2-215ENST00000484252 ETV4P43268 484 aa20.52■□□□□ 0.87
LIMS2-215ENST00000484252 ATP5OP48047 213 aa20.52■□□□□ 0.87
LIMS2-215ENST00000484252 INCA1Q0VD86 236 aa20.52■□□□□ 0.87
LIMS2-215ENST00000484252 CYP4V2Q6ZWL3 525 aaPredicted RBP20.52■□□□□ 0.87
LIMS2-215ENST00000484252 ILDR2Q71H61 639 aa20.52■□□□□ 0.87
LIMS2-215ENST00000484252 MTDHQ86UE4 582 aaKnown RBP20.52■□□□□ 0.87
LIMS2-215ENST00000484252 FBXO41Q8TF61 875 aa20.52■□□□□ 0.87
LIMS2-215ENST00000484252 RXFP2Q8WXD0 754 aa20.52■□□□□ 0.87
LIMS2-215ENST00000484252 APBB2Q92870 758 aa20.52■□□□□ 0.87
LIMS2-215ENST00000484252 RNF157Q96PX1 679 aa20.52■□□□□ 0.87
LIMS2-215ENST00000484252 MINDY3Q9H8M7 445 aa20.52■□□□□ 0.87
LIMS2-215ENST00000484252 BARX2Q9UMQ3 279 aaPredicted RBP20.52■□□□□ 0.87
LIMS2-215ENST00000484252 MTO1Q9Y2Z2 717 aaKnown RBP20.52■□□□□ 0.87
LIMS2-215ENST00000484252 CBX6O95503 412 aa20.51■□□□□ 0.87
LIMS2-215ENST00000484252 GJB1P08034 283 aa20.51■□□□□ 0.87
LIMS2-215ENST00000484252 PDGFRAP16234 1089 aa20.51■□□□□ 0.87
LIMS2-215ENST00000484252 TGM2P21980 687 aa20.51■□□□□ 0.87
LIMS2-215ENST00000484252 CALB2P22676 271 aa20.51■□□□□ 0.87
LIMS2-215ENST00000484252 CLCN3P51790 818 aa20.51■□□□□ 0.87
LIMS2-215ENST00000484252 YWHAGP61981 247 aaKnown RBP eCLIP20.51■□□□□ 0.87
LIMS2-215ENST00000484252 MMRN1Q13201 1228 aa20.51■□□□□ 0.87
LIMS2-215ENST00000484252 PRKG1Q13976 671 aa20.51■□□□□ 0.87
LIMS2-215ENST00000484252 NAA25Q14CX7 972 aa20.51■□□□□ 0.87
LIMS2-215ENST00000484252 KBTBD12Q3ZCT8 623 aa20.51■□□□□ 0.87
LIMS2-215ENST00000484252 PLEKHG4Q58EX7 1191 aa20.51■□□□□ 0.87
LIMS2-215ENST00000484252 LCLAT1Q6UWP7 414 aa20.51■□□□□ 0.87
LIMS2-215ENST00000484252 NPNTQ6UXI9 565 aa20.51■□□□□ 0.87
LIMS2-215ENST00000484252 ZC3H18Q86VM9 953 aaKnown RBP20.51■□□□□ 0.87
LIMS2-215ENST00000484252 TRAPPC12Q8WVT3 735 aa20.51■□□□□ 0.87
LIMS2-215ENST00000484252 USP6NLQ92738 828 aa20.51■□□□□ 0.87
LIMS2-215ENST00000484252 HPDLQ96IR7 371 aa20.51■□□□□ 0.87
LIMS2-215ENST00000484252 SLC5A4Q9NY91 659 aa20.51■□□□□ 0.87
LIMS2-215ENST00000484252 GPRC5DQ9NZD1 345 aa20.51■□□□□ 0.87
LIMS2-215ENST00000484252 DNAJC6O75061 913 aa20.5■□□□□ 0.87
LIMS2-215ENST00000484252 STAU1O95793 577 aaKnown RBP20.5■□□□□ 0.87
LIMS2-215ENST00000484252 FAAP100Q0VG06 881 aa20.5■□□□□ 0.87
LIMS2-215ENST00000484252 KRT81Q14533 505 aa20.5■□□□□ 0.87
LIMS2-215ENST00000484252 STILQ15468 1287 aa20.5■□□□□ 0.87
LIMS2-215ENST00000484252 CTC1Q2NKJ3 1217 aa20.5■□□□□ 0.87
LIMS2-215ENST00000484252 BOLA3Q53S33 107 aa20.5■□□□□ 0.87
LIMS2-215ENST00000484252 TTC39BQ5VTQ0 682 aaPredicted RBP20.5■□□□□ 0.87
LIMS2-215ENST00000484252 SH2D5Q6ZV89 423 aa20.5■□□□□ 0.87
LIMS2-215ENST00000484252 SLC26A11Q86WA9 606 aa20.5■□□□□ 0.87
LIMS2-215ENST00000484252 IFNLR1Q8IU57 520 aaPredicted RBP20.5■□□□□ 0.87
LIMS2-215ENST00000484252 RFWD2Q8NHY2 731 aa20.5■□□□□ 0.87
LIMS2-215ENST00000484252 TEKT4Q8WW24 435 aa20.5■□□□□ 0.87
LIMS2-215ENST00000484252 SERAC1Q96JX3 654 aa20.5■□□□□ 0.87
LIMS2-215ENST00000484252 ZNF668Q96K58 619 aaPredicted RBP20.5■□□□□ 0.87
LIMS2-215ENST00000484252 KLF6Q99612 283 aaPredicted RBP20.5■□□□□ 0.87
LIMS2-215ENST00000484252 USP29Q9HBJ7 922 aa20.5■□□□□ 0.87
LIMS2-215ENST00000484252 KANSL3Q9P2N6 904 aa20.5■□□□□ 0.87
LIMS2-215ENST00000484252 ZNF180Q9UJW8 692 aa20.5■□□□□ 0.87
LIMS2-215ENST00000484252 DPYSL4O14531 572 aa20.5■□□□□ 0.87
LIMS2-215ENST00000484252 PEX11AO75192 247 aa20.5■□□□□ 0.87
LIMS2-215ENST00000484252 PIAS1O75925 651 aa20.5■□□□□ 0.87
LIMS2-215ENST00000484252 PRKD1Q15139 912 aaPredicted RBP20.5■□□□□ 0.87
LIMS2-215ENST00000484252 ANKRD20A2Q5SQ80 823 aa20.5■□□□□ 0.87
LIMS2-215ENST00000484252 ANKRD20A1Q5TYW2 823 aa20.5■□□□□ 0.87
LIMS2-215ENST00000484252 ANKRD20A3Q5VUR7 823 aa20.5■□□□□ 0.87
LIMS2-215ENST00000484252 OR6B2Q6IFH4 312 aa20.5■□□□□ 0.87
LIMS2-215ENST00000484252 CCDC62Q6P9F0 684 aa20.5■□□□□ 0.87
LIMS2-215ENST00000484252 C4orf22Q6V702 233 aa20.5■□□□□ 0.87
LIMS2-215ENST00000484252 GADL1Q6ZQY3 521 aa20.5■□□□□ 0.87
LIMS2-215ENST00000484252 ENDOVQ8N8Q3 282 aaKnown RBP20.5■□□□□ 0.87
LIMS2-215ENST00000484252 CFAP61Q8NHU2 1237 aa20.5■□□□□ 0.87
LIMS2-215ENST00000484252 UBA3Q8TBC4 463 aa20.5■□□□□ 0.87
LIMS2-215ENST00000484252 STK32AQ8WU08 396 aa20.5■□□□□ 0.87
LIMS2-215ENST00000484252 FGD4Q96M96 766 aa20.5■□□□□ 0.87
LIMS2-215ENST00000484252 ZNF570Q96NI8 536 aa20.5■□□□□ 0.87
LIMS2-215ENST00000484252 DCTN4Q9UJW0 460 aa20.5■□□□□ 0.87
LIMS2-215ENST00000484252 ITGA11Q9UKX5 1188 aa20.5■□□□□ 0.87
LIMS2-215ENST00000484252 PTPRFP10586 1907 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms