RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 GPC5P78333 572 aa6.61□□□□□ -1.35
PTCD3-215ENST00000484203 NTHL1P78549 312 aa6.61□□□□□ -1.35
PTCD3-215ENST00000484203 AMPD2Q01433 879 aa6.61□□□□□ -1.35
PTCD3-215ENST00000484203 SPAG1Q07617 926 aa6.61□□□□□ -1.35
PTCD3-215ENST00000484203 TCF15Q12870 199 aa6.61□□□□□ -1.35
PTCD3-215ENST00000484203 DUSP4Q13115 394 aa6.61□□□□□ -1.35
PTCD3-215ENST00000484203 MLF2Q15773 248 aaPredicted RBP6.61□□□□□ -1.35
PTCD3-215ENST00000484203 SLC44A4Q53GD3 710 aa6.61□□□□□ -1.35
PTCD3-215ENST00000484203 PRSS36Q5K4E3 855 aa6.61□□□□□ -1.35
PTCD3-215ENST00000484203 ZBTB41Q5SVQ8 909 aa6.61□□□□□ -1.35
PTCD3-215ENST00000484203 RESP18Q5W5W9 173 aa6.61□□□□□ -1.35
PTCD3-215ENST00000484203 PARM1Q6UWI2 310 aa6.61□□□□□ -1.35
PTCD3-215ENST00000484203 CRELD2Q6UXH1 353 aaPredicted RBP6.61□□□□□ -1.35
PTCD3-215ENST00000484203 C4orf50Q6ZRC1 276 aa6.61□□□□□ -1.35
PTCD3-215ENST00000484203 WDR49Q8IV35 697 aa6.61□□□□□ -1.35
PTCD3-215ENST00000484203 C12orf56Q8IXR9 622 aa6.61□□□□□ -1.35
PTCD3-215ENST00000484203 YAF2Q8IY57 180 aa6.61□□□□□ -1.35
PTCD3-215ENST00000484203 FMR1NBQ8N0W7 255 aaPredicted RBP6.61□□□□□ -1.35
PTCD3-215ENST00000484203 DTWD1Q8N5C7 304 aa6.61□□□□□ -1.35
PTCD3-215ENST00000484203 CSGALNACT2Q8N6G5 542 aa6.61□□□□□ -1.35
PTCD3-215ENST00000484203 TMEM105Q8N8V8 129 aa6.61□□□□□ -1.35
PTCD3-215ENST00000484203 DTWD2Q8NBA8 298 aa6.61□□□□□ -1.35
PTCD3-215ENST00000484203 XXYLT1Q8NBI6 393 aa6.61□□□□□ -1.35
PTCD3-215ENST00000484203 PRSS33Q8NF86 280 aa6.61□□□□□ -1.35
PTCD3-215ENST00000484203 ZNF507Q8TCN5 953 aa6.61□□□□□ -1.35
PTCD3-215ENST00000484203 TMEM174Q8WUU8 243 aa6.61□□□□□ -1.35
PTCD3-215ENST00000484203 LEO1Q8WVC0 666 aaPredicted RBP6.61□□□□□ -1.35
PTCD3-215ENST00000484203 RSAD2Q8WXG1 361 aa6.61□□□□□ -1.35
PTCD3-215ENST00000484203 FGF14Q92915 247 aa6.61□□□□□ -1.35
PTCD3-215ENST00000484203 MCRS1Q96EZ8 462 aa6.61□□□□□ -1.35
PTCD3-215ENST00000484203 FUBP3Q96I24 572 aaKnown RBP eCLIP6.61□□□□□ -1.35
PTCD3-215ENST00000484203 DNAI2Q9GZS0 605 aa6.61□□□□□ -1.35
PTCD3-215ENST00000484203 ZCWPW1Q9H0M4 648 aa6.61□□□□□ -1.35
PTCD3-215ENST00000484203 TBC1D17Q9HA65 648 aa6.61□□□□□ -1.35
PTCD3-215ENST00000484203 THG1LQ9NWX6 298 aaKnown RBP6.61□□□□□ -1.35
PTCD3-215ENST00000484203 UXTQ9UBK9 157 aaPredicted RBP6.61□□□□□ -1.35
PTCD3-215ENST00000484203 PCDHB5Q9Y5E4 795 aa6.61□□□□□ -1.35
PTCD3-215ENST00000484203 TIMM13Q9Y5L4 95 aaPredicted RBP6.61□□□□□ -1.35
PTCD3-215ENST00000484203 PLXNA4Q9HCM2 1894 aa6.6□□□□□ -1.35
PTCD3-215ENST00000484203 ZNF318Q5VUA4 2279 aa6.6□□□□□ -1.35
PTCD3-215ENST00000484203 A0A087X0B3 334 aa6.6□□□□□ -1.35
PTCD3-215ENST00000484203 MTMR11A4FU01 709 aa6.6□□□□□ -1.35
PTCD3-215ENST00000484203 ZNF263O14978 683 aa6.6□□□□□ -1.35
PTCD3-215ENST00000484203 NARSO43776 548 aaKnown RBP6.6□□□□□ -1.35
PTCD3-215ENST00000484203 GADD45BO75293 160 aaPredicted RBP6.6□□□□□ -1.35
PTCD3-215ENST00000484203 PRPF6O94906 941 aaKnown RBP6.6□□□□□ -1.35
PTCD3-215ENST00000484203 PDGFBP01127 241 aaPredicted RBP6.6□□□□□ -1.35
PTCD3-215ENST00000484203 PROCP04070 461 aa6.6□□□□□ -1.35
PTCD3-215ENST00000484203 ITGB3P05106 788 aa6.6□□□□□ -1.35
PTCD3-215ENST00000484203 KRT19P08727 400 aa6.6□□□□□ -1.35
PTCD3-215ENST00000484203 CSH1P0DML2 217 aa6.6□□□□□ -1.35
PTCD3-215ENST00000484203 CSH2P0DML3 217 aa6.6□□□□□ -1.35
PTCD3-215ENST00000484203 MYL4P12829 197 aa6.6□□□□□ -1.35
PTCD3-215ENST00000484203 IGFBP6P24592 240 aaPredicted RBP6.6□□□□□ -1.35
PTCD3-215ENST00000484203 POLR2BP30876 1174 aaKnown RBP6.6□□□□□ -1.35
PTCD3-215ENST00000484203 ATICP31939 592 aa6.6□□□□□ -1.35
PTCD3-215ENST00000484203 NBL1P41271 181 aa6.6□□□□□ -1.35
PTCD3-215ENST00000484203 RPS9P46781 194 aaKnown RBP6.6□□□□□ -1.35
PTCD3-215ENST00000484203 SNRNP35Q16560 246 aaKnown RBP6.6□□□□□ -1.35
PTCD3-215ENST00000484203 KNOP1Q1ED39 458 aaKnown RBP6.6□□□□□ -1.35
PTCD3-215ENST00000484203 BMT2Q1RMZ1 405 aa6.6□□□□□ -1.35
PTCD3-215ENST00000484203 MGAT5BQ3V5L5 792 aa6.6□□□□□ -1.35
PTCD3-215ENST00000484203 CFAP221Q4G0U5 840 aa6.6□□□□□ -1.35
PTCD3-215ENST00000484203 SLC39A12Q504Y0 691 aa6.6□□□□□ -1.35
PTCD3-215ENST00000484203 FAM78AQ5JUQ0 283 aa6.6□□□□□ -1.35
PTCD3-215ENST00000484203 WSCD1Q658N2 575 aa6.6□□□□□ -1.35
PTCD3-215ENST00000484203 CWF19L1Q69YN2 538 aaKnown RBP6.6□□□□□ -1.35
PTCD3-215ENST00000484203 TXNDC11Q6PKC3 985 aa6.6□□□□□ -1.35
PTCD3-215ENST00000484203 SHC4Q6S5L8 630 aa6.6□□□□□ -1.35
PTCD3-215ENST00000484203 EPM2AIP1Q7L775 607 aaPredicted RBP6.6□□□□□ -1.35
PTCD3-215ENST00000484203 DNAJB7Q7Z6W7 309 aaPredicted RBP6.6□□□□□ -1.35
PTCD3-215ENST00000484203 MFSD6LQ8IWD5 586 aa6.6□□□□□ -1.35
PTCD3-215ENST00000484203 FSIP1Q8NA03 581 aa6.6□□□□□ -1.35
PTCD3-215ENST00000484203 ATAD1Q8NBU5 361 aa6.6□□□□□ -1.35
PTCD3-215ENST00000484203 PJA1Q8NG27 643 aa6.6□□□□□ -1.35
PTCD3-215ENST00000484203 ING5Q8WYH8 240 aa6.6□□□□□ -1.35
PTCD3-215ENST00000484203 SAAL1Q96ER3 474 aa6.6□□□□□ -1.35
PTCD3-215ENST00000484203 SPATA32Q96LK8 384 aa6.6□□□□□ -1.35
PTCD3-215ENST00000484203 SEPT5Q99719 369 aaPredicted RBP6.6□□□□□ -1.35
PTCD3-215ENST00000484203 CBWD1Q9BRT8 395 aa6.6□□□□□ -1.35
PTCD3-215ENST00000484203 DDX23Q9BUQ8 820 aaKnown RBP6.6□□□□□ -1.35
PTCD3-215ENST00000484203 FAM126AQ9BYI3 521 aaPredicted RBP6.6□□□□□ -1.35
PTCD3-215ENST00000484203 ADAM19Q9H013 955 aa6.6□□□□□ -1.35
PTCD3-215ENST00000484203 ATXN3LQ9H3M9 355 aa6.6□□□□□ -1.35
PTCD3-215ENST00000484203 C8orf33Q9H7E9 229 aaPredicted RBP6.6□□□□□ -1.35
PTCD3-215ENST00000484203 BRD9Q9H8M2 597 aa6.6□□□□□ -1.35
PTCD3-215ENST00000484203 LIN7BQ9HAP6 207 aa6.6□□□□□ -1.35
PTCD3-215ENST00000484203 AGPAT3Q9NRZ7 376 aa6.6□□□□□ -1.35
PTCD3-215ENST00000484203 EXOC1Q9NV70 894 aa6.6□□□□□ -1.35
PTCD3-215ENST00000484203 INTS13Q9NVM9 706 aa6.6□□□□□ -1.35
PTCD3-215ENST00000484203 HCFC1R1Q9NWW0 138 aa6.6□□□□□ -1.35
PTCD3-215ENST00000484203 HSPBP1Q9NZL4 362 aa6.6□□□□□ -1.35
PTCD3-215ENST00000484203 CEP72Q9P209 647 aa6.6□□□□□ -1.35
PTCD3-215ENST00000484203 FBXO4Q9UKT5 387 aa6.6□□□□□ -1.35
PTCD3-215ENST00000484203 CA14Q9ULX7 337 aa6.6□□□□□ -1.35
PTCD3-215ENST00000484203 PCDHA7Q9UN72 937 aa6.6□□□□□ -1.35
PTCD3-215ENST00000484203 AGAP1Q9UPQ3 857 aa6.6□□□□□ -1.35
PTCD3-215ENST00000484203 GVINP1Q7Z2Y8 2422 aa6.6□□□□□ -1.35
PTCD3-215ENST00000484203 WDR87Q6ZQQ6 2873 aa6.59□□□□□ -1.35
PTCD3-215ENST00000484203 LOXHD1Q8IVV2 1947 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms