RNA–Protein interactions for RNA: ENST00000481522.1

COPA-204, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-204ENST00000481522 ADGRA2Q96PE1 1338 aa4.47□□□□□ -1.69
COPA-204ENST00000481522 GCOM1H8Y6P7 765 aaPredicted RBP4.47□□□□□ -1.69
COPA-204ENST00000481522 TBX3O15119 743 aa4.47□□□□□ -1.69
COPA-204ENST00000481522 KRT38O76015 456 aa4.47□□□□□ -1.69
COPA-204ENST00000481522 TTLL1O95922 423 aa4.47□□□□□ -1.69
COPA-204ENST00000481522 KRT18P05783 430 aaKnown RBP4.47□□□□□ -1.69
COPA-204ENST00000481522 CYP2C9P11712 490 aa4.47□□□□□ -1.69
COPA-204ENST00000481522 RPL17P18621 184 aaKnown RBP4.47□□□□□ -1.69
COPA-204ENST00000481522 PPIFP30405 207 aaKnown RBP4.47□□□□□ -1.69
COPA-204ENST00000481522 PTH2RP49190 550 aa4.47□□□□□ -1.69
COPA-204ENST00000481522 HNRNPMP52272 730 aaKnown RBP eCLIP4.47□□□□□ -1.69
COPA-204ENST00000481522 ZNF134P52741 427 aa4.47□□□□□ -1.69
COPA-204ENST00000481522 UCP3P55916 312 aa4.47□□□□□ -1.69
COPA-204ENST00000481522 LILRA4P59901 499 aa4.47□□□□□ -1.69
COPA-204ENST00000481522 KRT17Q04695 432 aa4.47□□□□□ -1.69
COPA-204ENST00000481522 SEMA5AQ13591 1074 aa4.47□□□□□ -1.69
COPA-204ENST00000481522 CNGA2Q16280 664 aa4.47□□□□□ -1.69
COPA-204ENST00000481522 FAM153CQ494X1 144 aa4.47□□□□□ -1.69
COPA-204ENST00000481522 PLAC9Q5JTB6 97 aa4.47□□□□□ -1.69
COPA-204ENST00000481522 TSTD2Q5T7W7 516 aa4.47□□□□□ -1.69
COPA-204ENST00000481522 VPS53Q5VIR6 699 aa4.47□□□□□ -1.69
COPA-204ENST00000481522 ICE2Q659A1 982 aa4.47□□□□□ -1.69
COPA-204ENST00000481522 ARHGEF25Q86VW2 580 aa4.47□□□□□ -1.69
COPA-204ENST00000481522 MPP5Q8N3R9 675 aa4.47□□□□□ -1.69
COPA-204ENST00000481522 SLC15A4Q8N697 577 aa4.47□□□□□ -1.69
COPA-204ENST00000481522 FAM98AQ8NCA5 519 aaKnown RBP4.47□□□□□ -1.69
COPA-204ENST00000481522 SMG7Q92540 1137 aaKnown RBP4.47□□□□□ -1.69
COPA-204ENST00000481522 UROC1Q96N76 676 aa4.47□□□□□ -1.69
COPA-204ENST00000481522 SARGQ9BW04 601 aa4.47□□□□□ -1.69
COPA-204ENST00000481522 ZNF518BQ9C0D4 1074 aa4.47□□□□□ -1.69
COPA-204ENST00000481522 NUP62CLQ9H1M0 184 aa4.47□□□□□ -1.69
COPA-204ENST00000481522 ZNF287Q9HBT7 754 aa4.47□□□□□ -1.69
COPA-204ENST00000481522 XPR1Q9UBH6 696 aa4.47□□□□□ -1.69
COPA-204ENST00000481522 AFF4Q9UHB7 1163 aaKnown RBP4.47□□□□□ -1.69
COPA-204ENST00000481522 EHBP1L1Q8N3D4 1523 aa4.46□□□□□ -1.69
COPA-204ENST00000481522 DNMT1P26358 1616 aaKnown RBP4.46□□□□□ -1.69
COPA-204ENST00000481522 GLI3P10071 1580 aa4.46□□□□□ -1.7
COPA-204ENST00000481522 A0A087WWL8 130 aa4.46□□□□□ -1.7
COPA-204ENST00000481522 LINC00473A8K010 186 aa4.46□□□□□ -1.7
COPA-204ENST00000481522 DCLK1O15075 740 aa4.46□□□□□ -1.7
COPA-204ENST00000481522 MAP4K4O95819 1239 aaPredicted RBP4.46□□□□□ -1.7
COPA-204ENST00000481522 EBLN1P0CF75 366 aa4.46□□□□□ -1.7
COPA-204ENST00000481522 NR2F6P10588 404 aa4.46□□□□□ -1.7
COPA-204ENST00000481522 XRCC6P12956 609 aaKnown RBP eCLIP4.46□□□□□ -1.7
COPA-204ENST00000481522 TRIM27P14373 513 aa4.46□□□□□ -1.7
COPA-204ENST00000481522 ZFXP17010 805 aaPredicted RBP4.46□□□□□ -1.7
COPA-204ENST00000481522 SUMO3P55854 103 aaPredicted RBP4.46□□□□□ -1.7
COPA-204ENST00000481522 CTBP1Q13363 440 aa4.46□□□□□ -1.7
COPA-204ENST00000481522 BOP1Q14137 746 aaKnown RBP4.46□□□□□ -1.7
COPA-204ENST00000481522 SAFBQ15424 915 aaKnown RBP eCLIP4.46□□□□□ -1.7
COPA-204ENST00000481522 TBCCQ15814 346 aa4.46□□□□□ -1.7
COPA-204ENST00000481522 COBLL1Q53SF7 1204 aa4.46□□□□□ -1.7
COPA-204ENST00000481522 ZNF618Q5T7W0 954 aa4.46□□□□□ -1.7
COPA-204ENST00000481522 ARHGAP40Q5TG30 622 aa4.46□□□□□ -1.7
COPA-204ENST00000481522 CCSAPQ6IQ19 270 aaPredicted RBP4.46□□□□□ -1.7
COPA-204ENST00000481522 KSR2Q6VAB6 950 aa4.46□□□□□ -1.7
COPA-204ENST00000481522 KRT78Q8N1N4 520 aa4.46□□□□□ -1.7
COPA-204ENST00000481522 FAM109AQ8N4B1 249 aa4.46□□□□□ -1.7
COPA-204ENST00000481522 BTBD1Q9H0C5 482 aa4.46□□□□□ -1.7
COPA-204ENST00000481522 KLK15Q9H2R5 256 aa4.46□□□□□ -1.7
COPA-204ENST00000481522 CPNE5Q9HCH3 593 aa4.46□□□□□ -1.7
COPA-204ENST00000481522 SACM1LQ9NTJ5 587 aa4.46□□□□□ -1.7
COPA-204ENST00000481522 ASB6Q9NWX5 421 aa4.46□□□□□ -1.7
COPA-204ENST00000481522 RNF7Q9UBF6 113 aa4.46□□□□□ -1.7
COPA-204ENST00000481522 CPNE7Q9UBL6 633 aa4.46□□□□□ -1.7
COPA-204ENST00000481522 SERTAD3Q9UJW9 196 aa4.46□□□□□ -1.7
COPA-204ENST00000481522 FAM50BQ9Y247 325 aa4.46□□□□□ -1.7
COPA-204ENST00000481522 ENTPD2Q9Y5L3 495 aa4.46□□□□□ -1.7
COPA-204ENST00000481522 ANKRD11Q6UB99 2663 aaPredicted RBP4.46□□□□□ -1.7
COPA-204ENST00000481522 EFCAB5A4FU69 1503 aa4.46□□□□□ -1.7
COPA-204ENST00000481522 DISP2A7MBM2 1401 aa4.46□□□□□ -1.7
COPA-204ENST00000481522 CAMSAP2Q08AD1 1489 aa4.45□□□□□ -1.7
COPA-204ENST00000481522 WDR27A2RRH5 827 aa4.45□□□□□ -1.7
COPA-204ENST00000481522 VWC2LB2RUY7 222 aa4.45□□□□□ -1.7
COPA-204ENST00000481522 PPM1DO15297 605 aa4.45□□□□□ -1.7
COPA-204ENST00000481522 TLR5O60602 858 aa4.45□□□□□ -1.7
COPA-204ENST00000481522 PQBP1O60828 265 aaKnown RBP4.45□□□□□ -1.7
COPA-204ENST00000481522 MYL1P05976 194 aa4.45□□□□□ -1.7
COPA-204ENST00000481522 HSPA8P11142 646 aaKnown RBP4.45□□□□□ -1.7
COPA-204ENST00000481522 ZKSCAN1P17029 563 aaPredicted RBP4.45□□□□□ -1.7
COPA-204ENST00000481522 HOXB6P17509 224 aaKnown RBP4.45□□□□□ -1.7
COPA-204ENST00000481522 GPD1P21695 349 aa4.45□□□□□ -1.7
COPA-204ENST00000481522 WNT3P56703 355 aa4.45□□□□□ -1.7
COPA-204ENST00000481522 FMO1Q01740 532 aa4.45□□□□□ -1.7
COPA-204ENST00000481522 E2F2Q14209 437 aa4.45□□□□□ -1.7
COPA-204ENST00000481522 MGAT5BQ3V5L5 792 aa4.45□□□□□ -1.7
COPA-204ENST00000481522 RGS7BPQ6MZT1 257 aaPredicted RBP4.45□□□□□ -1.7
COPA-204ENST00000481522 PTDSS2Q9BVG9 487 aa4.45□□□□□ -1.7
COPA-204ENST00000481522 AMBRA1Q9C0C7 1298 aa4.45□□□□□ -1.7
COPA-204ENST00000481522 SMURF2Q9HAU4 748 aa4.45□□□□□ -1.7
COPA-204ENST00000481522 A1CFQ9NQ94 594 aaKnown RBP4.45□□□□□ -1.7
COPA-204ENST00000481522 IL17RBQ9NRM6 502 aa4.45□□□□□ -1.7
COPA-204ENST00000481522 ZSCAN32Q9NX65 697 aa4.45□□□□□ -1.7
COPA-204ENST00000481522 STK32BQ9NY57 414 aa4.45□□□□□ -1.7
COPA-204ENST00000481522 ARHGEF28Q8N1W1 1705 aaKnown RBP4.45□□□□□ -1.7
COPA-204ENST00000481522 KDM5DQ9BY66 1539 aa4.45□□□□□ -1.7
COPA-204ENST00000481522 USP9XQ93008 2570 aaPredicted RBP4.45□□□□□ -1.7
COPA-204ENST00000481522 IQGAP1P46940 1657 aa4.45□□□□□ -1.7
COPA-204ENST00000481522 A2MP01023 1474 aa4.44□□□□□ -1.7
COPA-204ENST00000481522 LRRC9Q6ZRR7 1453 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms