RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 ANKRD20A12PQ8NF67 263 aa6.64□□□□□ -1.35
SF3B1-209ENST00000479532 OR6P1Q8NGX9 317 aa6.64□□□□□ -1.35
SF3B1-209ENST00000479532 TIFAQ96CG3 184 aa6.64□□□□□ -1.35
SF3B1-209ENST00000479532 FAM46AQ96IP4 442 aaKnown RBP6.64□□□□□ -1.35
SF3B1-209ENST00000479532 ZNF558Q96NG5 402 aa6.64□□□□□ -1.35
SF3B1-209ENST00000479532 TGS1Q96RS0 853 aaKnown RBP6.64□□□□□ -1.35
SF3B1-209ENST00000479532 COLEC11Q9BWP8 271 aa6.64□□□□□ -1.35
SF3B1-209ENST00000479532 HAPLN2Q9GZV7 340 aa6.64□□□□□ -1.35
SF3B1-209ENST00000479532 IKZF4Q9H2S9 585 aa6.64□□□□□ -1.35
SF3B1-209ENST00000479532 METTL14Q9HCE5 456 aaKnown RBP6.64□□□□□ -1.35
SF3B1-209ENST00000479532 MED4Q9NPJ6 270 aa6.64□□□□□ -1.35
SF3B1-209ENST00000479532 RAD18Q9NS91 495 aa6.64□□□□□ -1.35
SF3B1-209ENST00000479532 TBC1D13Q9NVG8 400 aa6.64□□□□□ -1.35
SF3B1-209ENST00000479532 DMAC2Q9NW81 257 aa6.64□□□□□ -1.35
SF3B1-209ENST00000479532 FEZ2Q9UHY8 353 aaPredicted RBP6.64□□□□□ -1.35
SF3B1-209ENST00000479532 FAN1Q9Y2M0 1017 aa6.64□□□□□ -1.35
SF3B1-209ENST00000479532 C2CD2Q9Y426 696 aa6.64□□□□□ -1.35
SF3B1-209ENST00000479532 CEP83Q9Y592 693 aa6.64□□□□□ -1.35
SF3B1-209ENST00000479532 PCDHGC5Q9Y5F6 944 aa6.64□□□□□ -1.35
SF3B1-209ENST00000479532 V9GYY5 206 aaPredicted RBP6.64□□□□□ -1.35
SF3B1-209ENST00000479532 ANK1P16157 1881 aa6.64□□□□□ -1.35
SF3B1-209ENST00000479532 TRIP11Q15643 1979 aa6.64□□□□□ -1.35
SF3B1-209ENST00000479532 SMIM28A0A1B0GU29 152 aa6.63□□□□□ -1.35
SF3B1-209ENST00000479532 TTC26A0AVF1 554 aa6.63□□□□□ -1.35
SF3B1-209ENST00000479532 TRIM49BA6NDI0 452 aa6.63□□□□□ -1.35
SF3B1-209ENST00000479532 MEIS3P2A8K0S8 358 aa6.63□□□□□ -1.35
SF3B1-209ENST00000479532 BECN2A8MW95 431 aa6.63□□□□□ -1.35
SF3B1-209ENST00000479532 GRXCR1A8MXD5 290 aa6.63□□□□□ -1.35
SF3B1-209ENST00000479532 GOLGA6L19H0YKK7 550 aa6.63□□□□□ -1.35
SF3B1-209ENST00000479532 FAM189A1O60320 539 aa6.63□□□□□ -1.35
SF3B1-209ENST00000479532 N4BP1O75113 896 aaKnown RBP6.63□□□□□ -1.35
SF3B1-209ENST00000479532 RB1P06400 928 aa6.63□□□□□ -1.35
SF3B1-209ENST00000479532 CA3P07451 260 aa6.63□□□□□ -1.35
SF3B1-209ENST00000479532 CCDC172P0C7W6 258 aa6.63□□□□□ -1.35
SF3B1-209ENST00000479532 DLATP10515 647 aaKnown RBP6.63□□□□□ -1.35
SF3B1-209ENST00000479532 CYP3A5P20815 502 aa6.63□□□□□ -1.35
SF3B1-209ENST00000479532 PAX3P23760 479 aa6.63□□□□□ -1.35
SF3B1-209ENST00000479532 RPL9P32969 192 aaKnown RBP6.63□□□□□ -1.35
SF3B1-209ENST00000479532 CTNNB1P35222 781 aa6.63□□□□□ -1.35
SF3B1-209ENST00000479532 NOP2P46087 812 aaKnown RBP6.63□□□□□ -1.35
SF3B1-209ENST00000479532 OR1G1P47890 313 aa6.63□□□□□ -1.35
SF3B1-209ENST00000479532 GATMP50440 423 aa6.63□□□□□ -1.35
SF3B1-209ENST00000479532 VAMP7P51809 220 aa6.63□□□□□ -1.35
SF3B1-209ENST00000479532 TFAMQ00059 246 aaKnown RBP6.63□□□□□ -1.35
SF3B1-209ENST00000479532 MYL5Q02045 173 aa6.63□□□□□ -1.35
SF3B1-209ENST00000479532 KRT17Q04695 432 aa6.63□□□□□ -1.35
SF3B1-209ENST00000479532 CETN1Q12798 172 aa6.63□□□□□ -1.35
SF3B1-209ENST00000479532 BFSP1Q12934 665 aa6.63□□□□□ -1.35
SF3B1-209ENST00000479532 TUSC3Q13454 348 aa6.63□□□□□ -1.35
SF3B1-209ENST00000479532 RAB33AQ14088 237 aa6.63□□□□□ -1.35
SF3B1-209ENST00000479532 ANO6Q4KMQ2 910 aa6.63□□□□□ -1.35
SF3B1-209ENST00000479532 XKR4Q5GH76 650 aa6.63□□□□□ -1.35
SF3B1-209ENST00000479532 DCAF17Q5H9S7 520 aaPredicted RBP6.63□□□□□ -1.35
SF3B1-209ENST00000479532 GLRA4Q5JXX5 417 aa6.63□□□□□ -1.35
SF3B1-209ENST00000479532 EXOSC6Q5RKV6 272 aaKnown RBP6.63□□□□□ -1.35
SF3B1-209ENST00000479532 ZBTB41Q5SVQ8 909 aa6.63□□□□□ -1.35
SF3B1-209ENST00000479532 TCERG1LQ5VWI1 586 aa6.63□□□□□ -1.35
SF3B1-209ENST00000479532 SPATA1Q5VX52 437 aa6.63□□□□□ -1.35
SF3B1-209ENST00000479532 ICE2Q659A1 982 aa6.63□□□□□ -1.35
SF3B1-209ENST00000479532 JADE1Q6IE81 842 aa6.63□□□□□ -1.35
SF3B1-209ENST00000479532 TTI2Q6NXR4 508 aa6.63□□□□□ -1.35
SF3B1-209ENST00000479532 CRELD2Q6UXH1 353 aaPredicted RBP6.63□□□□□ -1.35
SF3B1-209ENST00000479532 ALKAL1Q6UXT8 129 aa6.63□□□□□ -1.35
SF3B1-209ENST00000479532 FRMD5Q7Z6J6 570 aa6.63□□□□□ -1.35
SF3B1-209ENST00000479532 CBWD2Q8IUF1 395 aa6.63□□□□□ -1.35
SF3B1-209ENST00000479532 WDR49Q8IV35 697 aa6.63□□□□□ -1.35
SF3B1-209ENST00000479532 TMEM192Q8IY95 271 aa6.63□□□□□ -1.35
SF3B1-209ENST00000479532 CNPY4Q8N129 248 aa6.63□□□□□ -1.35
SF3B1-209ENST00000479532 COLGALT1Q8NBJ5 622 aa6.63□□□□□ -1.35
SF3B1-209ENST00000479532 RBBP8NLQ8NC74 664 aaPredicted RBP6.63□□□□□ -1.35
SF3B1-209ENST00000479532 CCDC150Q8NCX0 1101 aa6.63□□□□□ -1.35
SF3B1-209ENST00000479532 ENOX1Q8TC92 643 aaKnown RBP6.63□□□□□ -1.35
SF3B1-209ENST00000479532 CCDC127Q96BQ5 260 aa6.63□□□□□ -1.35
SF3B1-209ENST00000479532 TMEM169Q96HH4 297 aa6.63□□□□□ -1.35
SF3B1-209ENST00000479532 MFSD14AQ96MC6 490 aa6.63□□□□□ -1.35
SF3B1-209ENST00000479532 ZNF560Q96MR9 790 aa6.63□□□□□ -1.35
SF3B1-209ENST00000479532 CGRRF1Q99675 332 aa6.63□□□□□ -1.35
SF3B1-209ENST00000479532 BPIFA3Q9BQP9 254 aa6.63□□□□□ -1.35
SF3B1-209ENST00000479532 C11orf84Q9BUA3 381 aaPredicted RBP6.63□□□□□ -1.35
SF3B1-209ENST00000479532 KIAA1671Q9BY89 1806 aa6.63□□□□□ -1.35
SF3B1-209ENST00000479532 NKX2-4Q9H2Z4 354 aa6.63□□□□□ -1.35
SF3B1-209ENST00000479532 THAP9Q9H5L6 903 aa6.63□□□□□ -1.35
SF3B1-209ENST00000479532 NRDE2Q9H7Z3 1164 aa6.63□□□□□ -1.35
SF3B1-209ENST00000479532 RC3H2Q9HBD1 1191 aaKnown RBP6.63□□□□□ -1.35
SF3B1-209ENST00000479532 DONSONQ9NYP3 566 aa6.63□□□□□ -1.35
SF3B1-209ENST00000479532 CWC15Q9P013 229 aaKnown RBP6.63□□□□□ -1.35
SF3B1-209ENST00000479532 REV1Q9UBZ9 1251 aa6.63□□□□□ -1.35
SF3B1-209ENST00000479532 ARMCX3Q9UH62 379 aaPredicted RBP6.63□□□□□ -1.35
SF3B1-209ENST00000479532 PUF60Q9UHX1 559 aaKnown RBP6.63□□□□□ -1.35
SF3B1-209ENST00000479532 MRPL42Q9Y6G3 142 aaKnown RBP6.63□□□□□ -1.35
SF3B1-209ENST00000479532 TNRC18O15417 2968 aaPredicted RBP6.62□□□□□ -1.35
SF3B1-209ENST00000479532 LINC01553A4QN01 128 aa6.62□□□□□ -1.35
SF3B1-209ENST00000479532 CASTOR2A6NHX0 329 aa6.62□□□□□ -1.35
SF3B1-209ENST00000479532 PODXLO00592 558 aa6.62□□□□□ -1.35
SF3B1-209ENST00000479532 PTGESO14684 152 aa6.62□□□□□ -1.35
SF3B1-209ENST00000479532 TRAPPC3O43617 180 aa6.62□□□□□ -1.35
SF3B1-209ENST00000479532 LPXNO60711 386 aa6.62□□□□□ -1.35
SF3B1-209ENST00000479532 TADA2AO75478 443 aa6.62□□□□□ -1.35
SF3B1-209ENST00000479532 AKAP3O75969 853 aa6.62□□□□□ -1.35
SF3B1-209ENST00000479532 ADRB2P07550 413 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms