RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 OR5H15A6NDH6 313 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 OR5H14A6NHG9 310 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 OR5H1A6NKK0 313 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 CAPN14A8MX76 684 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 BAIAP3O94812 1187 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 SLC34A2O95436 690 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 BPNT1O95861 308 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 AFPP02771 609 aaKnown RBP5.6□□□□□ -1.51
USF3-202ENST00000478658 IGFALSP35858 605 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 FEN1P39748 380 aaKnown RBP5.6□□□□□ -1.51
USF3-202ENST00000478658 LRRC63Q05C16 580 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 ELOAQ14241 798 aaKnown RBP5.6□□□□□ -1.51
USF3-202ENST00000478658 ZSCAN26Q16670 478 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 ALFQ53S48 1182 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 SCIMPQ6UWF3 145 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 ITIH5Q86UX2 942 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 MPP5Q8N3R9 675 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 GALNT6Q8NCL4 622 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 USP33Q8TEY7 942 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 DHTKD1Q96HY7 919 aaPredicted RBP5.6□□□□□ -1.51
USF3-202ENST00000478658 ZNF408Q9H9D4 720 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 VTA1Q9NP79 307 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 GTF2A1LQ9UNN4 478 aa5.6□□□□□ -1.51
USF3-202ENST00000478658 TM7SF2O76062 418 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 CD2BP2O95400 341 aaKnown RBP5.59□□□□□ -1.51
USF3-202ENST00000478658 TTKP33981 857 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 SOAT1P35610 550 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 MDH1P40925 334 aaKnown RBP5.59□□□□□ -1.51
USF3-202ENST00000478658 NLRP12P59046 1061 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 GNGT1P63211 74 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 ITIH4Q14624 930 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 RINLQ6ZS11 566 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 DAGLBQ8NCG7 672 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 RPLP0P6Q8NHW5 317 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 SPATA18Q8TC71 538 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 USP7Q93009 1102 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 OSBPL11Q9BXB4 747 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 UGT2B28Q9BY64 529 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 PRRG4Q9BZD6 226 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 ZCWPW1Q9H0M4 648 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 TBC1D22BQ9NU19 505 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 FAM135BQ49AJ0 1406 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 EFCAB10A6NFE3 127 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 SRP72O76094 671 aaKnown RBP5.59□□□□□ -1.51
USF3-202ENST00000478658 CSN2P05814 226 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 GSTM2P28161 218 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 PRKAA2P54646 552 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 CDH11P55287 796 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 ALG10Q5BKT4 473 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 ALG10BQ5I7T1 473 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 FAM91A1Q658Y4 838 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 ANKRD26P1Q6NSI1 321 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 EMBQ6PCB8 327 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 TPH2Q8IWU9 490 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 MAGOHBQ96A72 148 aaKnown RBP5.59□□□□□ -1.51
USF3-202ENST00000478658 HIST1H2AAQ96QV6 131 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 FAM167BQ9BTA0 163 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 SPTLC3Q9NUV7 552 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 USP18Q9UMW8 372 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 RPAP1Q9BWH6 1393 aaPredicted RBP5.59□□□□□ -1.51
USF3-202ENST00000478658 H7C1Q1 480 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 RTCAO00442 366 aaKnown RBP5.59□□□□□ -1.51
USF3-202ENST00000478658 SUPT7LO94864 414 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 CSTBP04080 98 aaKnown RBP5.59□□□□□ -1.51
USF3-202ENST00000478658 H2AFXP16104 143 aaPredicted RBP5.59□□□□□ -1.51
USF3-202ENST00000478658 ZAP70P43403 619 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 HSD17B7P56937 341 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 ANKRD13DQ6ZTN6 518 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 PRPF39Q86UA1 669 aaKnown RBP5.59□□□□□ -1.51
USF3-202ENST00000478658 OAFQ86UD1 273 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 TMC8Q8IU68 726 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 ZFP28Q8NHY6 868 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 CORO1CQ9ULV4 474 aaPredicted RBP5.59□□□□□ -1.51
USF3-202ENST00000478658 POLIQ9UNA4 740 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 ATAD2BQ9ULI0 1458 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 NPHP3-ACAD11A0A0J9YXS1 232 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 TESPA1A2RU30 521 aaPredicted RBP5.59□□□□□ -1.51
USF3-202ENST00000478658 FAM234BA2RU67 622 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 SLCO1B7G3V0H7 640 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 BCAR3O75815 825 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 IFNA10P01566 189 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 IFNA7P01567 189 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 IFNA4P05014 189 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 PSMA2P25787 234 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 GRIK1P39086 918 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 HARS2P49590 506 aaKnown RBP5.59□□□□□ -1.51
USF3-202ENST00000478658 TWF1Q12792 350 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 DGUOKQ16854 277 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 KCTD16Q68DU8 428 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 ZCCHC12Q6PEW1 402 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 HDDC3Q8N4P3 179 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 AVL9Q8NBF6 648 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 DNAJA4Q8WW22 397 aaPredicted RBP5.59□□□□□ -1.51
USF3-202ENST00000478658 PRICKLE1Q96MT3 831 aaPredicted RBP5.59□□□□□ -1.51
USF3-202ENST00000478658 CYP3A43Q9HB55 503 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 KMT5AQ9NQR1 393 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 LRCH1Q9Y2L9 728 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 IFT52Q9Y366 437 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 IGSF9BQ9UPX0 1349 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 C2orf71A6NGG8 1288 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms