RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 BTBD8Q5XKL5 378 aa21.79■■□□□ 1.08
VPS36-203ENST00000475375 LIMS2Q7Z4I7 341 aa21.79■■□□□ 1.08
VPS36-203ENST00000475375 OR6B3Q8NGW1 331 aa21.79■■□□□ 1.08
VPS36-203ENST00000475375 MRPL45Q9BRJ2 306 aaKnown RBP21.79■■□□□ 1.08
VPS36-203ENST00000475375 TBC1D14Q9P2M4 693 aa21.79■■□□□ 1.08
VPS36-203ENST00000475375 PILRBQ9UKJ0 227 aa21.79■■□□□ 1.08
VPS36-203ENST00000475375 SLC6A14Q9UN76 642 aa21.79■■□□□ 1.08
VPS36-203ENST00000475375 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.79■■□□□ 1.08
VPS36-203ENST00000475375 CLIC4Q9Y696 253 aa21.79■■□□□ 1.08
VPS36-203ENST00000475375 VPS37CA5D8V6 355 aaPredicted RBP21.78■■□□□ 1.08
VPS36-203ENST00000475375 OLFM2O95897 454 aa21.78■■□□□ 1.08
VPS36-203ENST00000475375 DUOXA1Q1HG43 343 aa21.78■■□□□ 1.08
VPS36-203ENST00000475375 CBWD2Q8IUF1 395 aa21.78■■□□□ 1.08
VPS36-203ENST00000475375 NAT16Q8N8M0 369 aa21.78■■□□□ 1.08
VPS36-203ENST00000475375 CEP76Q8TAP6 659 aa21.78■■□□□ 1.08
VPS36-203ENST00000475375 CLIC6Q96NY7 704 aa21.78■■□□□ 1.08
VPS36-203ENST00000475375 LHX6Q9UPM6 363 aa21.78■■□□□ 1.08
VPS36-203ENST00000475375 MSRB2Q9Y3D2 182 aa21.78■■□□□ 1.08
VPS36-203ENST00000475375 DSPP15924 2871 aaKnown RBP21.78■■□□□ 1.08
VPS36-203ENST00000475375 PTPRDP23468 1912 aa21.78■■□□□ 1.08
VPS36-203ENST00000475375 KIAA0391O15091 583 aaKnown RBP21.77■■□□□ 1.08
VPS36-203ENST00000475375 CD2BP2O95400 341 aaKnown RBP21.77■■□□□ 1.08
VPS36-203ENST00000475375 CHRM1P11229 460 aaPredicted RBP21.77■■□□□ 1.08
VPS36-203ENST00000475375 HOXD12P35452 270 aa21.77■■□□□ 1.08
VPS36-203ENST00000475375 STAT6P42226 847 aa21.77■■□□□ 1.08
VPS36-203ENST00000475375 GAD2Q05329 585 aa21.77■■□□□ 1.08
VPS36-203ENST00000475375 RING1Q06587 406 aa21.77■■□□□ 1.08
VPS36-203ENST00000475375 SEMA3BQ13214 749 aa21.77■■□□□ 1.08
VPS36-203ENST00000475375 ACAP1Q15027 740 aa21.77■■□□□ 1.08
VPS36-203ENST00000475375 TRMT11Q7Z4G4 463 aaKnown RBP21.77■■□□□ 1.08
VPS36-203ENST00000475375 PIP4P1Q86T03 277 aa21.77■■□□□ 1.08
VPS36-203ENST00000475375 ZNF513Q8N8E2 541 aaPredicted RBP21.77■■□□□ 1.08
VPS36-203ENST00000475375 PANK2Q9BZ23 570 aa21.77■■□□□ 1.08
VPS36-203ENST00000475375 ZNF518BQ9C0D4 1074 aa21.77■■□□□ 1.08
VPS36-203ENST00000475375 ELOVL4Q9GZR5 314 aa21.77■■□□□ 1.08
VPS36-203ENST00000475375 FBXO2Q9UK22 296 aaPredicted RBP21.77■■□□□ 1.08
VPS36-203ENST00000475375 SH3BP1Q9Y3L3 701 aa21.77■■□□□ 1.08
VPS36-203ENST00000475375 A0A0A0MRY4 1105 aa21.76■■□□□ 1.07
VPS36-203ENST00000475375 E2F8A0AVK6 867 aa21.76■■□□□ 1.07
VPS36-203ENST00000475375 ZBTB24O43167 697 aaPredicted RBP21.76■■□□□ 1.07
VPS36-203ENST00000475375 OPHN1O60890 802 aa21.76■■□□□ 1.07
VPS36-203ENST00000475375 DLATP10515 647 aaKnown RBP21.76■■□□□ 1.07
VPS36-203ENST00000475375 PTPN1P18031 435 aaKnown RBP21.76■■□□□ 1.07
VPS36-203ENST00000475375 YWHAQP27348 245 aa21.76■■□□□ 1.07
VPS36-203ENST00000475375 CACNA2D1P54289 1103 aa21.76■■□□□ 1.07
VPS36-203ENST00000475375 TNNC1P63316 161 aa21.76■■□□□ 1.07
VPS36-203ENST00000475375 PREPLQ4J6C6 727 aaPredicted RBP21.76■■□□□ 1.07
VPS36-203ENST00000475375 C10orf76Q5T2E6 689 aa21.76■■□□□ 1.07
VPS36-203ENST00000475375 SLC36A4Q6YBV0 504 aa21.76■■□□□ 1.07
VPS36-203ENST00000475375 CCDC73Q6ZRK6 1079 aa21.76■■□□□ 1.07
VPS36-203ENST00000475375 NUDT18Q6ZVK8 323 aa21.76■■□□□ 1.07
VPS36-203ENST00000475375 STXBP4Q6ZWJ1 553 aa21.76■■□□□ 1.07
VPS36-203ENST00000475375 TRAPPC11Q7Z392 1133 aa21.76■■□□□ 1.07
VPS36-203ENST00000475375 WDR49Q8IV35 697 aa21.76■■□□□ 1.07
VPS36-203ENST00000475375 FBXO32Q969P5 355 aa21.76■■□□□ 1.07
VPS36-203ENST00000475375 DEC1Q9P2X7 70 aa21.76■■□□□ 1.07
VPS36-203ENST00000475375 SRPRBQ9Y5M8 271 aaKnown RBP21.76■■□□□ 1.07
VPS36-203ENST00000475375 UPK3BL1B0FP48 263 aa21.75■■□□□ 1.07
VPS36-203ENST00000475375 UPK3BL2E5RIL1 263 aa21.75■■□□□ 1.07
VPS36-203ENST00000475375 H0Y626 953 aa21.75■■□□□ 1.07
VPS36-203ENST00000475375 CLDN5O00501 218 aa21.75■■□□□ 1.07
VPS36-203ENST00000475375 TRIM16O95361 564 aa21.75■■□□□ 1.07
VPS36-203ENST00000475375 SERPINF2P08697 491 aa21.75■■□□□ 1.07
VPS36-203ENST00000475375 PI4KAP42356 2102 aa21.75■■□□□ 1.07
VPS36-203ENST00000475375 WASP42768 502 aa21.75■■□□□ 1.07
VPS36-203ENST00000475375 CEBPZQ03701 1054 aaKnown RBP21.75■■□□□ 1.07
VPS36-203ENST00000475375 ANO4Q32M45 955 aa21.75■■□□□ 1.07
VPS36-203ENST00000475375 LRSAM1Q6UWE0 723 aa21.75■■□□□ 1.07
VPS36-203ENST00000475375 RABEPKQ7Z6M1 372 aa21.75■■□□□ 1.07
VPS36-203ENST00000475375 CCDC65Q8IXS2 484 aa21.75■■□□□ 1.07
VPS36-203ENST00000475375 NUP93Q8N1F7 819 aa21.75■■□□□ 1.07
VPS36-203ENST00000475375 PDZD8Q8NEN9 1154 aa21.75■■□□□ 1.07
VPS36-203ENST00000475375 NACA2Q9H009 215 aa21.75■■□□□ 1.07
VPS36-203ENST00000475375 DPEP3Q9H4B8 488 aa21.75■■□□□ 1.07
VPS36-203ENST00000475375 HSPBP1Q9NZL4 362 aa21.75■■□□□ 1.07
VPS36-203ENST00000475375 CALCOCO1Q9P1Z2 691 aa21.75■■□□□ 1.07
VPS36-203ENST00000475375 TNRC6BQ9UPQ9 1833 aaKnown RBP21.74■■□□□ 1.07
VPS36-203ENST00000475375 FREM2Q5SZK8 3169 aa21.74■■□□□ 1.07
VPS36-203ENST00000475375 FRMD3A2A2Y4 597 aa21.74■■□□□ 1.07
VPS36-203ENST00000475375 A8MXQ7 604 aa21.74■■□□□ 1.07
VPS36-203ENST00000475375 COCHO43405 550 aa21.74■■□□□ 1.07
VPS36-203ENST00000475375 CLSTN1O94985 981 aa21.74■■□□□ 1.07
VPS36-203ENST00000475375 HOXB2P14652 356 aa21.74■■□□□ 1.07
VPS36-203ENST00000475375 GABRG2P18507 467 aa21.74■■□□□ 1.07
VPS36-203ENST00000475375 TNNI1P19237 187 aa21.74■■□□□ 1.07
VPS36-203ENST00000475375 ZNF33AQ06730 810 aa21.74■■□□□ 1.07
VPS36-203ENST00000475375 WDR72Q3MJ13 1102 aa21.74■■□□□ 1.07
VPS36-203ENST00000475375 C8orf34Q49A92 452 aa21.74■■□□□ 1.07
VPS36-203ENST00000475375 HECTD3Q5T447 861 aa21.74■■□□□ 1.07
VPS36-203ENST00000475375 PEAR1Q5VY43 1037 aaPredicted RBP21.74■■□□□ 1.07
VPS36-203ENST00000475375 CHCHD4Q8N4Q1 142 aa21.74■■□□□ 1.07
VPS36-203ENST00000475375 MINDY1Q8N5J2 469 aa21.74■■□□□ 1.07
VPS36-203ENST00000475375 RDH13Q8NBN7 331 aa21.74■■□□□ 1.07
VPS36-203ENST00000475375 OTUB2Q96DC9 234 aa21.74■■□□□ 1.07
VPS36-203ENST00000475375 ERLEC1Q96DZ1 483 aa21.74■■□□□ 1.07
VPS36-203ENST00000475375 KIAA1586Q9HCI6 787 aa21.74■■□□□ 1.07
VPS36-203ENST00000475375 TMEM30AQ9NV96 361 aa21.74■■□□□ 1.07
VPS36-203ENST00000475375 NME7Q9Y5B8 376 aa21.74■■□□□ 1.07
VPS36-203ENST00000475375 MYOFQ9NZM1 2061 aa21.74■■□□□ 1.07
VPS36-203ENST00000475375 ANKRD11Q6UB99 2663 aaPredicted RBP21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms