RNA–Protein interactions for RNA: ENST00000474896.1

SRRT-209, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-209ENST00000474896 TNFRSF4P43489 277 aa16.61■□□□□ 0.25
SRRT-209ENST00000474896 NASPP49321 788 aaPredicted RBP16.61■□□□□ 0.25
SRRT-209ENST00000474896 CYP2J2P51589 502 aa16.61■□□□□ 0.25
SRRT-209ENST00000474896 ZNF252P-AS1Q0IIN9 211 aa16.61■□□□□ 0.25
SRRT-209ENST00000474896 FOXC1Q12948 553 aa16.61■□□□□ 0.25
SRRT-209ENST00000474896 PSMD6Q15008 389 aa16.61■□□□□ 0.25
SRRT-209ENST00000474896 LPCAT2Q7L5N7 544 aa16.61■□□□□ 0.25
SRRT-209ENST00000474896 EPM2AIP1Q7L775 607 aaPredicted RBP16.61■□□□□ 0.25
SRRT-209ENST00000474896 DDX42Q86XP3 938 aaKnown RBP eCLIP16.61■□□□□ 0.25
SRRT-209ENST00000474896 TMEFF1Q8IYR6 380 aa16.61■□□□□ 0.25
SRRT-209ENST00000474896 NUP93Q8N1F7 819 aa16.61■□□□□ 0.25
SRRT-209ENST00000474896 ZNF516Q92618 1163 aa16.61■□□□□ 0.25
SRRT-209ENST00000474896 CGRRF1Q99675 332 aa16.61■□□□□ 0.25
SRRT-209ENST00000474896 TRIM9Q9C026 710 aa16.61■□□□□ 0.25
SRRT-209ENST00000474896 ELOVL4Q9GZR5 314 aa16.61■□□□□ 0.25
SRRT-209ENST00000474896 POLMQ9NP87 494 aaPredicted RBP16.61■□□□□ 0.25
SRRT-209ENST00000474896 ZDHHC4Q9NPG8 344 aa16.61■□□□□ 0.25
SRRT-209ENST00000474896 ARHGEF4Q9NR80 690 aa16.61■□□□□ 0.25
SRRT-209ENST00000474896 AGPAT3Q9NRZ7 376 aa16.61■□□□□ 0.25
SRRT-209ENST00000474896 KBTBD4Q9NVX7 518 aa16.61■□□□□ 0.25
SRRT-209ENST00000474896 BCCIPQ9P287 314 aaKnown RBP eCLIP16.61■□□□□ 0.25
SRRT-209ENST00000474896 TBC1D14Q9P2M4 693 aa16.61■□□□□ 0.25
SRRT-209ENST00000474896 NXF1Q9UBU9 619 aaKnown RBP16.61■□□□□ 0.25
SRRT-209ENST00000474896 MYO18AQ92614 2054 aaKnown RBP16.6■□□□□ 0.25
SRRT-209ENST00000474896 C1QTNF9BB2RNN3 333 aa16.6■□□□□ 0.25
SRRT-209ENST00000474896 C1QTNF9P0C862 333 aa16.6■□□□□ 0.25
SRRT-209ENST00000474896 CHRM1P11229 460 aaPredicted RBP16.6■□□□□ 0.25
SRRT-209ENST00000474896 SPINK2P20155 84 aa16.6■□□□□ 0.25
SRRT-209ENST00000474896 CSRP1P21291 193 aaKnown RBP16.6■□□□□ 0.25
SRRT-209ENST00000474896 P2RY2P41231 377 aa16.6■□□□□ 0.25
SRRT-209ENST00000474896 KIR2DL1P43626 348 aaPredicted RBP16.6■□□□□ 0.25
SRRT-209ENST00000474896 MYL6P60660 151 aa16.6■□□□□ 0.25
SRRT-209ENST00000474896 ASIC1P78348 528 aa16.6■□□□□ 0.25
SRRT-209ENST00000474896 KRT85P78386 507 aa16.6■□□□□ 0.25
SRRT-209ENST00000474896 AMPD3Q01432 767 aa16.6■□□□□ 0.25
SRRT-209ENST00000474896 KDSRQ06136 332 aa16.6■□□□□ 0.25
SRRT-209ENST00000474896 CYP24A1Q07973 514 aa16.6■□□□□ 0.25
SRRT-209ENST00000474896 TRPC3Q13507 836 aa16.6■□□□□ 0.25
SRRT-209ENST00000474896 STK38Q15208 465 aa16.6■□□□□ 0.25
SRRT-209ENST00000474896 E2F4Q16254 413 aa16.6■□□□□ 0.25
SRRT-209ENST00000474896 HSF5Q4G112 596 aaPredicted RBP16.6■□□□□ 0.25
SRRT-209ENST00000474896 EOGTQ5NDL2 527 aa16.6■□□□□ 0.25
SRRT-209ENST00000474896 LY6G5CQ5SRR4 150 aa16.6■□□□□ 0.25
SRRT-209ENST00000474896 ARMCX6Q7L4S7 300 aa16.6■□□□□ 0.25
SRRT-209ENST00000474896 NELFCDQ8IXH7 590 aa16.6■□□□□ 0.25
SRRT-209ENST00000474896 PGBD3Q8N328 593 aa16.6■□□□□ 0.25
SRRT-209ENST00000474896 B3GALNT2Q8NCR0 500 aa16.6■□□□□ 0.25
SRRT-209ENST00000474896 WHAMMQ8TF30 809 aa16.6■□□□□ 0.25
SRRT-209ENST00000474896 HMGB4Q8WW32 186 aa16.6■□□□□ 0.25
SRRT-209ENST00000474896 FBXO32Q969P5 355 aa16.6■□□□□ 0.25
SRRT-209ENST00000474896 KCNK16Q96T55 309 aa16.6■□□□□ 0.25
SRRT-209ENST00000474896 MBD1Q9UIS9 605 aaPredicted RBP16.6■□□□□ 0.25
SRRT-209ENST00000474896 RALYQ9UKM9 306 aaKnown RBP16.6■□□□□ 0.25
SRRT-209ENST00000474896 CFAP45Q9UL16 551 aa16.6■□□□□ 0.25
SRRT-209ENST00000474896 LAMA1P25391 3075 aa16.59■□□□□ 0.25
SRRT-209ENST00000474896 E2F8A0AVK6 867 aa16.59■□□□□ 0.25
SRRT-209ENST00000474896 TBC1D3BA6NDS4 549 aa16.59■□□□□ 0.25
SRRT-209ENST00000474896 COCHO43405 550 aa16.59■□□□□ 0.25
SRRT-209ENST00000474896 ADAM23O75077 832 aa16.59■□□□□ 0.25
SRRT-209ENST00000474896 RTN3O95197 1032 aaPredicted RBP16.59■□□□□ 0.25
SRRT-209ENST00000474896 YEATS4O95619 227 aa16.59■□□□□ 0.25
SRRT-209ENST00000474896 TOP3BO95985 862 aaKnown RBP16.59■□□□□ 0.25
SRRT-209ENST00000474896 PTGER3P43115 390 aa16.59■□□□□ 0.25
SRRT-209ENST00000474896 GAD2Q05329 585 aa16.59■□□□□ 0.25
SRRT-209ENST00000474896 TRIM61Q5EBN2 209 aa16.59■□□□□ 0.25
SRRT-209ENST00000474896 FAM26FQ5R3K3 315 aa16.59■□□□□ 0.25
SRRT-209ENST00000474896 UNQ6494/PRO21346Q6UXR6 183 aa16.59■□□□□ 0.25
SRRT-209ENST00000474896 NAT16Q8N8M0 369 aa16.59■□□□□ 0.25
SRRT-209ENST00000474896 XXYLT1Q8NBI6 393 aa16.59■□□□□ 0.25
SRRT-209ENST00000474896 LINC00301Q8NCQ3 95 aa16.59■□□□□ 0.25
SRRT-209ENST00000474896 SCAMP5Q8TAC9 235 aa16.59■□□□□ 0.25
SRRT-209ENST00000474896 DHX58Q96C10 678 aa16.59■□□□□ 0.25
SRRT-209ENST00000474896 SPACA7Q96KW9 195 aa16.59■□□□□ 0.25
SRRT-209ENST00000474896 TMEM74BQ9NUR3 256 aa16.59■□□□□ 0.25
SRRT-209ENST00000474896 EVLQ9UI08 416 aaPredicted RBP16.59■□□□□ 0.25
SRRT-209ENST00000474896 ASCC3Q8N3C0 2202 aaKnown RBP16.58■□□□□ 0.25
SRRT-209ENST00000474896 TCRBV21S2A2A0A5A6 115 aa16.58■□□□□ 0.24
SRRT-209ENST00000474896 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.58■□□□□ 0.24
SRRT-209ENST00000474896 TNFRSF10BO14763 440 aa16.58■□□□□ 0.24
SRRT-209ENST00000474896 SPTLC2O15270 562 aa16.58■□□□□ 0.24
SRRT-209ENST00000474896 PHACTR2O75167 634 aa16.58■□□□□ 0.24
SRRT-209ENST00000474896 ATICP31939 592 aa16.58■□□□□ 0.24
SRRT-209ENST00000474896 CDH8P55286 799 aa16.58■□□□□ 0.24
SRRT-209ENST00000474896 LMAN2Q12907 356 aa16.58■□□□□ 0.24
SRRT-209ENST00000474896 BYSLQ13895 437 aaKnown RBP16.58■□□□□ 0.24
SRRT-209ENST00000474896 MAP7D1Q3KQU3 841 aa16.58■□□□□ 0.24
SRRT-209ENST00000474896 HECTD3Q5T447 861 aa16.58■□□□□ 0.24
SRRT-209ENST00000474896 BTBD8Q5XKL5 378 aa16.58■□□□□ 0.24
SRRT-209ENST00000474896 SYT12Q8IV01 421 aa16.58■□□□□ 0.24
SRRT-209ENST00000474896 PDZD8Q8NEN9 1154 aa16.58■□□□□ 0.24
SRRT-209ENST00000474896 DEFB124Q8NES8 71 aa16.58■□□□□ 0.24
SRRT-209ENST00000474896 OVCA2Q8WZ82 227 aa16.58■□□□□ 0.24
SRRT-209ENST00000474896 OTUB2Q96DC9 234 aa16.58■□□□□ 0.24
SRRT-209ENST00000474896 C7orf25Q9BPX7 421 aa16.58■□□□□ 0.24
SRRT-209ENST00000474896 MED10Q9BTT4 135 aa16.58■□□□□ 0.24
SRRT-209ENST00000474896 NUSAP1Q9BXS6 441 aaKnown RBP16.58■□□□□ 0.24
SRRT-209ENST00000474896 XYLT2Q9H1B5 865 aa16.58■□□□□ 0.24
SRRT-209ENST00000474896 CUEDC2Q9H467 287 aa16.58■□□□□ 0.24
SRRT-209ENST00000474896 WASF3Q9UPY6 502 aa16.58■□□□□ 0.24
SRRT-209ENST00000474896 SH3BP1Q9Y3L3 701 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms