RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 DDX43Q9NXZ2 648 aaKnown RBP4.8□□□□□ -1.64
CCNL1-215ENST00000474539 FAM198AQ9UFP1 575 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 TUBGCP4Q9UGJ1 667 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 GRIN2DO15399 1336 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 EXOC1LA0A1B0GW35 172 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 EIF3HO15372 352 aaKnown RBP eCLIP4.8□□□□□ -1.64
CCNL1-215ENST00000474539 CTIFO43310 598 aaKnown RBP4.8□□□□□ -1.64
CCNL1-215ENST00000474539 ZNF862O60290 1169 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 POLBP06746 335 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 SERPINF2P08697 491 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 CCL5P13501 91 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 CYP2A7P20853 494 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 SDHBP21912 280 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 UBA1P22314 1058 aaKnown RBP4.8□□□□□ -1.64
CCNL1-215ENST00000474539 HMOX2P30519 316 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 CASP14P31944 242 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 GUCA1AP43080 201 aaPredicted RBP4.8□□□□□ -1.64
CCNL1-215ENST00000474539 EHHADHQ08426 723 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 CAPRIN1Q14444 709 aaKnown RBP4.8□□□□□ -1.64
CCNL1-215ENST00000474539 STAT4Q14765 748 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 FIGNQ5HY92 759 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 EOGTQ5NDL2 527 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 NAA35Q5VZE5 725 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 TRIM65Q6PJ69 517 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 ADSSL1Q8N142 457 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 HDDC3Q8N4P3 179 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 OR6P1Q8NGX9 317 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 SNF8Q96H20 258 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 TGS1Q96RS0 853 aaKnown RBP4.8□□□□□ -1.64
CCNL1-215ENST00000474539 OSMRQ99650 979 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 CCDC3Q9BQI4 270 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 INTS13Q9NVM9 706 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 ZFATQ9P243 1243 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 FBXO2Q9UK22 296 aaPredicted RBP4.8□□□□□ -1.64
CCNL1-215ENST00000474539 USP18Q9UMW8 372 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 COPEO14579 308 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 GRM6O15303 877 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 MPOP05164 745 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 MMP3P08254 477 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 OR56A5P0C7T3 313 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 STMN1P16949 149 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 CDH2P19022 906 aaPredicted RBP4.8□□□□□ -1.64
CCNL1-215ENST00000474539 TKTP29401 623 aaKnown RBP4.8□□□□□ -1.64
CCNL1-215ENST00000474539 RPL3P39023 403 aaKnown RBP4.8□□□□□ -1.64
CCNL1-215ENST00000474539 SARSP49591 514 aaKnown RBP4.8□□□□□ -1.64
CCNL1-215ENST00000474539 ADKP55263 362 aaKnown RBP4.8□□□□□ -1.64
CCNL1-215ENST00000474539 CACNB1Q02641 598 aaPredicted RBP4.8□□□□□ -1.64
CCNL1-215ENST00000474539 GAD2Q05329 585 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 TWF1Q12792 350 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 NCAPHQ15003 741 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 PKN3Q6P5Z2 889 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 RRM2BQ7LG56 351 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 SLFN11Q7Z7L1 901 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 MAP4K3Q8IVH8 894 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 RAPGEF5Q92565 580 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 GRAMD1AQ96CP6 724 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 OTUB2Q96DC9 234 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 FUBP3Q96I24 572 aaKnown RBP eCLIP4.8□□□□□ -1.644e-6■■■□□ 15
CCNL1-215ENST00000474539 PRRX2Q99811 253 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 BCL2L12Q9HB09 334 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 AGPAT3Q9NRZ7 376 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 LRRC4BQ9NT99 713 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 HCN3Q9P1Z3 774 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 KIAA1522Q9P206 1035 aaPredicted RBP4.8□□□□□ -1.64
CCNL1-215ENST00000474539 GPN3Q9UHW5 284 aaPredicted RBP4.8□□□□□ -1.64
CCNL1-215ENST00000474539 ARHGAP26Q9UNA1 814 aa4.8□□□□□ -1.64
CCNL1-215ENST00000474539 PACSIN2Q9UNF0 486 aaPredicted RBP4.8□□□□□ -1.64
CCNL1-215ENST00000474539 C10orf71Q711Q0 1435 aa4.79□□□□□ -1.64
CCNL1-215ENST00000474539 TMX2-CTNND1H3BSU7 103 aa4.79□□□□□ -1.64
CCNL1-215ENST00000474539 CACNB4O00305 520 aaPredicted RBP4.79□□□□□ -1.64
CCNL1-215ENST00000474539 ATP9BO43861 1147 aa4.79□□□□□ -1.64
CCNL1-215ENST00000474539 CLASP2O75122 1294 aaKnown RBP4.79□□□□□ -1.64
CCNL1-215ENST00000474539 ANP32DO95626 131 aa4.79□□□□□ -1.64
CCNL1-215ENST00000474539 FTLP02792 175 aaPredicted RBP4.79□□□□□ -1.64
CCNL1-215ENST00000474539 HNRNPA1P09651 372 aaKnown RBP eCLIP4.79□□□□□ -1.64
CCNL1-215ENST00000474539 PIM1P11309 404 aaPredicted RBP4.79□□□□□ -1.64
CCNL1-215ENST00000474539 CLCN3P51790 818 aa4.79□□□□□ -1.64
CCNL1-215ENST00000474539 EIF3EP60228 445 aaKnown RBP4.79□□□□□ -1.64
CCNL1-215ENST00000474539 CYP24A1Q07973 514 aa4.79□□□□□ -1.64
CCNL1-215ENST00000474539 CNTN1Q12860 1018 aa4.79□□□□□ -1.64
CCNL1-215ENST00000474539 SEC23AQ15436 765 aa4.79□□□□□ -1.64
CCNL1-215ENST00000474539 BBS9Q3SYG4 887 aa4.79□□□□□ -1.64
CCNL1-215ENST00000474539 WDR45BQ5MNZ6 344 aa4.79□□□□□ -1.64
CCNL1-215ENST00000474539 RASSF3Q86WH2 238 aa4.79□□□□□ -1.64
CCNL1-215ENST00000474539 RASAL3Q86YV0 1011 aa4.79□□□□□ -1.64
CCNL1-215ENST00000474539 SIRT2Q8IXJ6 389 aa4.79□□□□□ -1.64
CCNL1-215ENST00000474539 RGL4Q8IZJ4 473 aa4.79□□□□□ -1.64
CCNL1-215ENST00000474539 MYO1HQ8N1T3 1032 aa4.79□□□□□ -1.64
CCNL1-215ENST00000474539 SMG7Q92540 1137 aaKnown RBP4.79□□□□□ -1.64
CCNL1-215ENST00000474539 ASB2Q96Q27 587 aa4.79□□□□□ -1.64
CCNL1-215ENST00000474539 DDIT4Q9NX09 232 aa4.79□□□□□ -1.64
CCNL1-215ENST00000474539 BTBD7Q9P203 1132 aa4.79□□□□□ -1.64
CCNL1-215ENST00000474539 CAPN11Q9UMQ6 739 aa4.79□□□□□ -1.64
CCNL1-215ENST00000474539 FHOD1Q9Y613 1164 aa4.79□□□□□ -1.64
CCNL1-215ENST00000474539 SYNDIG1LA6NDD5 238 aa4.79□□□□□ -1.64
CCNL1-215ENST00000474539 C5orf58C9J3I9 102 aa4.79□□□□□ -1.64
CCNL1-215ENST00000474539 RAMP2O60895 175 aa4.79□□□□□ -1.64
CCNL1-215ENST00000474539 HSPA4LO95757 839 aa4.79□□□□□ -1.64
CCNL1-215ENST00000474539 IFNA14P01570 189 aa4.79□□□□□ -1.64
CCNL1-215ENST00000474539 RHOXF2BP0C7M4 288 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms