RNA–Protein interactions for RNA: ENST00000471582.5

COL20A1-205, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 1,924 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-205ENST00000471582 SPATA18Q8TC71 538 aa19.45■□□□□ 0.7
COL20A1-205ENST00000471582 ZNF560Q96MR9 790 aa19.45■□□□□ 0.7
COL20A1-205ENST00000471582 DNAI2Q9GZS0 605 aa19.45■□□□□ 0.7
COL20A1-205ENST00000471582 CYLDQ9NQC7 956 aa19.45■□□□□ 0.7
COL20A1-205ENST00000471582 GDAP2Q9NXN4 497 aa19.45■□□□□ 0.7
COL20A1-205ENST00000471582 HES2Q9Y543 173 aa19.45■□□□□ 0.7
COL20A1-205ENST00000471582 NME7Q9Y5B8 376 aa19.45■□□□□ 0.7
COL20A1-205ENST00000471582 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.45■□□□□ 0.7
COL20A1-205ENST00000471582 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.44■□□□□ 0.7
COL20A1-205ENST00000471582 ZNF487B1APH4 448 aa19.44■□□□□ 0.7
COL20A1-205ENST00000471582 AKR1A1P14550 325 aa19.44■□□□□ 0.7
COL20A1-205ENST00000471582 KCNE1P15382 129 aa19.44■□□□□ 0.7
COL20A1-205ENST00000471582 RGS7P49802 495 aa19.44■□□□□ 0.7
COL20A1-205ENST00000471582 PSEN2P49810 448 aa19.44■□□□□ 0.7
COL20A1-205ENST00000471582 PDIA2Q13087 525 aaKnown RBP19.44■□□□□ 0.7
COL20A1-205ENST00000471582 FASTKD3Q14CZ7 662 aaKnown RBP19.44■□□□□ 0.7
COL20A1-205ENST00000471582 SNX17Q15036 470 aa19.44■□□□□ 0.7
COL20A1-205ENST00000471582 CCDC121Q6ZUS5 278 aa19.44■□□□□ 0.7
COL20A1-205ENST00000471582 ARCQ7LC44 396 aa19.44■□□□□ 0.7
COL20A1-205ENST00000471582 LRRC34Q8IZ02 419 aa19.44■□□□□ 0.7
COL20A1-205ENST00000471582 CRYBG2Q8N1P7 616 aa19.44■□□□□ 0.7
COL20A1-205ENST00000471582 ANKS4BQ8N8V4 417 aa19.44■□□□□ 0.7
COL20A1-205ENST00000471582 CCDC197Q8NCU1 140 aa19.44■□□□□ 0.7
COL20A1-205ENST00000471582 LENG1Q96BZ8 264 aaPredicted RBP19.44■□□□□ 0.7
COL20A1-205ENST00000471582 RNF157Q96PX1 679 aa19.44■□□□□ 0.7
COL20A1-205ENST00000471582 FAM49BQ9NUQ9 324 aa19.44■□□□□ 0.7
COL20A1-205ENST00000471582 SLC24A2Q9UI40 661 aa19.44■□□□□ 0.7
COL20A1-205ENST00000471582 E7ESA3 106 aa19.43■□□□□ 0.7
COL20A1-205ENST00000471582 MDM4O15151 490 aa19.43■□□□□ 0.7
COL20A1-205ENST00000471582 MYL3P08590 195 aa19.43■□□□□ 0.7
COL20A1-205ENST00000471582 CREB1P16220 341 aa19.43■□□□□ 0.7
COL20A1-205ENST00000471582 TSHRP16473 764 aa19.43■□□□□ 0.7
COL20A1-205ENST00000471582 GCAP28676 217 aa19.43■□□□□ 0.7
COL20A1-205ENST00000471582 CTGFP29279 349 aa19.43■□□□□ 0.7
COL20A1-205ENST00000471582 ROR1Q01973 937 aa19.43■□□□□ 0.7
COL20A1-205ENST00000471582 ITIH4Q14624 930 aa19.43■□□□□ 0.7
COL20A1-205ENST00000471582 ARHGEF18Q6ZSZ5 1173 aa19.43■□□□□ 0.7
COL20A1-205ENST00000471582 UNC45BQ8IWX7 931 aa19.43■□□□□ 0.7
COL20A1-205ENST00000471582 CCDC13Q8IYE1 715 aa19.43■□□□□ 0.7
COL20A1-205ENST00000471582 OR6B3Q8NGW1 331 aa19.43■□□□□ 0.7
COL20A1-205ENST00000471582 DYDC1Q8WWB3 177 aa19.43■□□□□ 0.7
COL20A1-205ENST00000471582 DNAJB3Q8WWF6 145 aa19.43■□□□□ 0.7
COL20A1-205ENST00000471582 KHSRPQ92945 711 aaKnown RBP eCLIP19.43■□□□□ 0.7
COL20A1-205ENST00000471582 SENP1Q9P0U3 644 aa19.43■□□□□ 0.7
COL20A1-205ENST00000471582 PIN4Q9Y237 131 aaKnown RBP19.43■□□□□ 0.7
COL20A1-205ENST00000471582 A8MXQ7 604 aa19.43■□□□□ 0.7
COL20A1-205ENST00000471582 PIK3R2O00459 728 aa19.43■□□□□ 0.7
COL20A1-205ENST00000471582 PAPSS1O43252 624 aaPredicted RBP19.43■□□□□ 0.7
COL20A1-205ENST00000471582 AOC2O75106 756 aa19.43■□□□□ 0.7
COL20A1-205ENST00000471582 PHBP35232 272 aa19.43■□□□□ 0.7
COL20A1-205ENST00000471582 IFNAR2P48551 515 aa19.43■□□□□ 0.7
COL20A1-205ENST00000471582 RPL34P49207 117 aaKnown RBP19.43■□□□□ 0.7
COL20A1-205ENST00000471582 LIG3P49916 1009 aa19.43■□□□□ 0.7
COL20A1-205ENST00000471582 SLC18A1P54219 525 aa19.43■□□□□ 0.7
COL20A1-205ENST00000471582 PDE4CQ08493 712 aa19.43■□□□□ 0.7
COL20A1-205ENST00000471582 BST2Q10589 180 aaKnown RBP19.43■□□□□ 0.7
COL20A1-205ENST00000471582 GLRA4Q5JXX5 417 aa19.43■□□□□ 0.7
COL20A1-205ENST00000471582 RNF187Q5TA31 235 aaPredicted RBP19.43■□□□□ 0.7
COL20A1-205ENST00000471582 PPP1R21Q6ZMI0 780 aa19.43■□□□□ 0.7
COL20A1-205ENST00000471582 LIMS2Q7Z4I7 341 aa19.43■□□□□ 0.7
COL20A1-205ENST00000471582 SRRM1Q8IYB3 904 aaKnown RBP19.43■□□□□ 0.7
COL20A1-205ENST00000471582 ANKRD52Q8NB46 1076 aa19.43■□□□□ 0.7
COL20A1-205ENST00000471582 ATP11CQ8NB49 1132 aa19.43■□□□□ 0.7
COL20A1-205ENST00000471582 VPS37BQ9H9H4 285 aa19.43■□□□□ 0.7
COL20A1-205ENST00000471582 KCNK9Q9NPC2 374 aa19.43■□□□□ 0.7
COL20A1-205ENST00000471582 SAMD15Q9P1V8 674 aa19.43■□□□□ 0.7
COL20A1-205ENST00000471582 TBK1Q9UHD2 729 aa19.43■□□□□ 0.7
COL20A1-205ENST00000471582 SMIM28A0A1B0GU29 152 aa19.42■□□□□ 0.7
COL20A1-205ENST00000471582 GOLGA6L7A0A1B0GV03 622 aa19.42■□□□□ 0.7
COL20A1-205ENST00000471582 RASA4BC9J798 803 aa19.42■□□□□ 0.7
COL20A1-205ENST00000471582 RASA4O43374 803 aa19.42■□□□□ 0.7
COL20A1-205ENST00000471582 GRAP2O75791 330 aa19.42■□□□□ 0.7
COL20A1-205ENST00000471582 VIMP08670 466 aaKnown RBP19.42■□□□□ 0.7
COL20A1-205ENST00000471582 TGM2P21980 687 aa19.42■□□□□ 0.7
COL20A1-205ENST00000471582 PTPN9P43378 593 aa19.42■□□□□ 0.7
COL20A1-205ENST00000471582 APLP1P51693 650 aa19.42■□□□□ 0.7
COL20A1-205ENST00000471582 BCAT1P54687 386 aa19.42■□□□□ 0.7
COL20A1-205ENST00000471582 CBLBQ13191 982 aa19.42■□□□□ 0.7
COL20A1-205ENST00000471582 MMRN1Q13201 1228 aa19.42■□□□□ 0.7
COL20A1-205ENST00000471582 HIC1Q14526 733 aa19.42■□□□□ 0.7
COL20A1-205ENST00000471582 KRT81Q14533 505 aa19.42■□□□□ 0.7
COL20A1-205ENST00000471582 CDO1Q16878 200 aa19.42■□□□□ 0.7
COL20A1-205ENST00000471582 ANKRD22Q5VYY1 191 aa19.42■□□□□ 0.7
COL20A1-205ENST00000471582 TRABD2AQ86V40 505 aa19.42■□□□□ 0.7
COL20A1-205ENST00000471582 NME8Q8N427 588 aa19.42■□□□□ 0.7
COL20A1-205ENST00000471582 FAM71DQ8N9W8 422 aa19.42■□□□□ 0.7
COL20A1-205ENST00000471582 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.42■□□□□ 0.7
COL20A1-205ENST00000471582 FAM172AQ8WUF8 416 aa19.42■□□□□ 0.7
COL20A1-205ENST00000471582 KBTBD7Q8WVZ9 684 aa19.42■□□□□ 0.7
COL20A1-205ENST00000471582 TMEM40Q8WWA1 233 aa19.42■□□□□ 0.7
COL20A1-205ENST00000471582 CKAP2Q8WWK9 683 aa19.42■□□□□ 0.7
COL20A1-205ENST00000471582 SGSM3Q96HU1 749 aa19.42■□□□□ 0.7
COL20A1-205ENST00000471582 ACTR5Q9H9F9 607 aaPredicted RBP19.42■□□□□ 0.7
COL20A1-205ENST00000471582 NKIRAS1Q9NYS0 192 aa19.42■□□□□ 0.7
COL20A1-205ENST00000471582 ZMYND8Q9ULU4 1186 aaPredicted RBP19.42■□□□□ 0.7
COL20A1-205ENST00000471582 CFAP69A5D8W1 941 aa19.41■□□□□ 0.7
COL20A1-205ENST00000471582 KPNA7A9QM74 516 aa19.41■□□□□ 0.7
COL20A1-205ENST00000471582 CRYBB1P53674 252 aaPredicted RBP19.41■□□□□ 0.7
COL20A1-205ENST00000471582 TMED2Q15363 201 aa19.41■□□□□ 0.7
COL20A1-205ENST00000471582 FSCN1Q16658 493 aaKnown RBP19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms