RNA–Protein interactions for RNA: ENST00000466171.1

CCDC93-205, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-205ENST00000466171 CNOT3O75175 753 aaKnown RBP2.8□□□□□ -1.96
CCDC93-205ENST00000466171 KATNA1O75449 491 aa2.8□□□□□ -1.96
CCDC93-205ENST00000466171 ZRANB2O95218 330 aaKnown RBP eCLIP2.8□□□□□ -1.96
CCDC93-205ENST00000466171 IL33O95760 270 aa2.8□□□□□ -1.96
CCDC93-205ENST00000466171 TOMM40O96008 361 aa2.8□□□□□ -1.96
CCDC93-205ENST00000466171 CTSAP10619 480 aa2.8□□□□□ -1.96
CCDC93-205ENST00000466171 VCAM1P19320 739 aa2.8□□□□□ -1.96
CCDC93-205ENST00000466171 NCLP19338 710 aaKnown RBP2.8□□□□□ -1.96
CCDC93-205ENST00000466171 CDK11BP21127 795 aaKnown RBP2.8□□□□□ -1.96
CCDC93-205ENST00000466171 KCNA3P22001 575 aa2.8□□□□□ -1.96
CCDC93-205ENST00000466171 SLC11A2P49281 568 aa2.8□□□□□ -1.96
CCDC93-205ENST00000466171 HSF1Q00613 529 aa2.8□□□□□ -1.96
CCDC93-205ENST00000466171 PSG6Q00889 435 aa2.8□□□□□ -1.96
CCDC93-205ENST00000466171 LMAN2Q12907 356 aa2.8□□□□□ -1.96
CCDC93-205ENST00000466171 CCNIQ14094 377 aa2.8□□□□□ -1.96
CCDC93-205ENST00000466171 LY6KQ17RY6 165 aa2.8□□□□□ -1.96
CCDC93-205ENST00000466171 SLC9C1Q4G0N8 1177 aa2.8□□□□□ -1.96
CCDC93-205ENST00000466171 TMTC4Q5T4D3 741 aa2.8□□□□□ -1.96
CCDC93-205ENST00000466171 ZNF549Q6P9A3 640 aa2.8□□□□□ -1.96
CCDC93-205ENST00000466171 RANBP10Q6VN20 620 aa2.8□□□□□ -1.96
CCDC93-205ENST00000466171 DCDC5Q6ZRR9 648 aa2.8□□□□□ -1.96
CCDC93-205ENST00000466171 PIP4P1Q86T03 277 aa2.8□□□□□ -1.96
CCDC93-205ENST00000466171 GAS2L3Q86XJ1 694 aa2.8□□□□□ -1.96
CCDC93-205ENST00000466171 ZNF280BQ86YH2 543 aa2.8□□□□□ -1.96
CCDC93-205ENST00000466171 ZNF548Q8NEK5 533 aaPredicted RBP2.8□□□□□ -1.96
CCDC93-205ENST00000466171 PPP2R3CQ969Q6 453 aa2.8□□□□□ -1.96
CCDC93-205ENST00000466171 CTAGE1Q96RT6 745 aa2.8□□□□□ -1.96
CCDC93-205ENST00000466171 C17orf80Q9BSJ5 609 aa2.8□□□□□ -1.96
CCDC93-205ENST00000466171 PIH1D1Q9NWS0 290 aaKnown RBP2.8□□□□□ -1.96
CCDC93-205ENST00000466171 CPA4Q9UI42 421 aa2.8□□□□□ -1.96
CCDC93-205ENST00000466171 ICKQ9UPZ9 632 aa2.8□□□□□ -1.96
CCDC93-205ENST00000466171 TNKSO95271 1327 aa2.79□□□□□ -1.96
CCDC93-205ENST00000466171 KRT86O43790 486 aa2.79□□□□□ -1.96
CCDC93-205ENST00000466171 TMPRSS11DO60235 418 aa2.79□□□□□ -1.96
CCDC93-205ENST00000466171 VNN1O95497 513 aa2.79□□□□□ -1.96
CCDC93-205ENST00000466171 CD63P08962 238 aa2.79□□□□□ -1.96
CCDC93-205ENST00000466171 AKAP5P24588 427 aa2.79□□□□□ -1.96
CCDC93-205ENST00000466171 MT3P25713 68 aa2.79□□□□□ -1.96
CCDC93-205ENST00000466171 EPHA3P29320 983 aa2.79□□□□□ -1.96
CCDC93-205ENST00000466171 TACR3P29371 465 aa2.79□□□□□ -1.96
CCDC93-205ENST00000466171 KCNJ4P48050 445 aa2.79□□□□□ -1.96
CCDC93-205ENST00000466171 HYAL1Q12794 435 aa2.79□□□□□ -1.96
CCDC93-205ENST00000466171 STIM1Q13586 685 aa2.79□□□□□ -1.96
CCDC93-205ENST00000466171 FAM50AQ14320 339 aaKnown RBP2.79□□□□□ -1.96
CCDC93-205ENST00000466171 KRT81Q14533 505 aa2.79□□□□□ -1.96
CCDC93-205ENST00000466171 KCNB1Q14721 858 aa2.79□□□□□ -1.96
CCDC93-205ENST00000466171 ZNF750Q32MQ0 723 aa2.79□□□□□ -1.96
CCDC93-205ENST00000466171 UBAP2Q5T6F2 1119 aaKnown RBP2.79□□□□□ -1.96
CCDC93-205ENST00000466171 ZNF783Q6ZMS7 281 aa2.79□□□□□ -1.96
CCDC93-205ENST00000466171 Q6ZTC4 211 aa2.79□□□□□ -1.96
CCDC93-205ENST00000466171 C18orf65Q6ZTR6 163 aa2.79□□□□□ -1.96
CCDC93-205ENST00000466171 UBE2Q1Q7Z7E8 422 aa2.79□□□□□ -1.96
CCDC93-205ENST00000466171 KRT78Q8N1N4 520 aa2.79□□□□□ -1.96
CCDC93-205ENST00000466171 SLC15A4Q8N697 577 aa2.79□□□□□ -1.96
CCDC93-205ENST00000466171 DNAJC5GQ8N7S2 189 aa2.79□□□□□ -1.96
CCDC93-205ENST00000466171 BPIFB1Q8TDL5 484 aa2.79□□□□□ -1.96
CCDC93-205ENST00000466171 TMEM171Q8WVE6 324 aa2.79□□□□□ -1.96
CCDC93-205ENST00000466171 MVB12AQ96EY5 273 aa2.79□□□□□ -1.96
CCDC93-205ENST00000466171 TXLNGQ9NUQ3 528 aa2.79□□□□□ -1.96
CCDC93-205ENST00000466171 MGAT4CQ9UBM8 478 aa2.79□□□□□ -1.96
CCDC93-205ENST00000466171 STXBP5LQ9Y2K9 1186 aa2.79□□□□□ -1.96
CCDC93-205ENST00000466171 USP12O75317 370 aa2.78□□□□□ -1.96
CCDC93-205ENST00000466171 SYF2O95926 243 aaKnown RBP2.78□□□□□ -1.96
CCDC93-205ENST00000466171 APEHP13798 732 aaKnown RBP2.78□□□□□ -1.96
CCDC93-205ENST00000466171 CREB1P16220 341 aa2.78□□□□□ -1.96
CCDC93-205ENST00000466171 CPA2P48052 419 aa2.78□□□□□ -1.96
CCDC93-205ENST00000466171 BCAT1P54687 386 aa2.78□□□□□ -1.96
CCDC93-205ENST00000466171 CFHR1Q03591 330 aa2.78□□□□□ -1.96
CCDC93-205ENST00000466171 FGL2Q14314 439 aa2.78□□□□□ -1.96
CCDC93-205ENST00000466171 PFKFB3Q16875 520 aaPredicted RBP2.78□□□□□ -1.96
CCDC93-205ENST00000466171 ZIK1Q3SY52 487 aaPredicted RBP2.78□□□□□ -1.96
CCDC93-205ENST00000466171 PLA1AQ53H76 456 aa2.78□□□□□ -1.96
CCDC93-205ENST00000466171 TMEM240Q5SV17 173 aa2.78□□□□□ -1.96
CCDC93-205ENST00000466171 PDXDC1Q6P996 788 aa2.78□□□□□ -1.96
CCDC93-205ENST00000466171 CATIPQ7Z7H3 387 aa2.78□□□□□ -1.96
CCDC93-205ENST00000466171 MMP21Q8N119 569 aa2.78□□□□□ -1.96
CCDC93-205ENST00000466171 ZBTB8BQ8NAP8 495 aaPredicted RBP2.78□□□□□ -1.96
CCDC93-205ENST00000466171 MAFAQ8NHW3 353 aaPredicted RBP2.78□□□□□ -1.96
CCDC93-205ENST00000466171 HSPBAP1Q96EW2 488 aa2.78□□□□□ -1.96
CCDC93-205ENST00000466171 NLRP4Q96MN2 994 aa2.78□□□□□ -1.96
CCDC93-205ENST00000466171 MAP3K14Q99558 947 aa2.78□□□□□ -1.96
CCDC93-205ENST00000466171 SMAD5Q99717 465 aaKnown RBP2.78□□□□□ -1.96
CCDC93-205ENST00000466171 ZPBPQ9BS86 351 aa2.78□□□□□ -1.96
CCDC93-205ENST00000466171 TMEM204Q9BSN7 226 aa2.78□□□□□ -1.96
CCDC93-205ENST00000466171 MS4A7Q9GZW8 240 aaPredicted RBP2.78□□□□□ -1.96
CCDC93-205ENST00000466171 ARMT1Q9H993 441 aa2.78□□□□□ -1.96
CCDC93-205ENST00000466171 MLXIPQ9HAP2 919 aa2.78□□□□□ -1.96
CCDC93-205ENST00000466171 GBA2Q9HCG7 927 aaPredicted RBP2.78□□□□□ -1.96
CCDC93-205ENST00000466171 DRG1Q9Y295 367 aaKnown RBP2.78□□□□□ -1.96
CCDC93-205ENST00000466171 PAXBP1Q9Y5B6 917 aa2.78□□□□□ -1.96
CCDC93-205ENST00000466171 A0A087WWL8 130 aa2.77□□□□□ -1.97
CCDC93-205ENST00000466171 IGLV5-39A0A0G2JS06 123 aa2.77□□□□□ -1.97
CCDC93-205ENST00000466171 FOXN3O00409 490 aaPredicted RBP2.77□□□□□ -1.97
CCDC93-205ENST00000466171 MARCH6O60337 910 aa2.77□□□□□ -1.97
CCDC93-205ENST00000466171 TBC1D4O60343 1298 aa2.77□□□□□ -1.97
CCDC93-205ENST00000466171 IBSPP21815 317 aaPredicted RBP2.77□□□□□ -1.97
CCDC93-205ENST00000466171 THBS4P35443 961 aa2.77□□□□□ -1.97
CCDC93-205ENST00000466171 IL6STP40189 918 aaPredicted RBP2.77□□□□□ -1.97
CCDC93-205ENST00000466171 DIO1P49895 249 aa2.77□□□□□ -1.97
CCDC93-205ENST00000466171 RHDQ02161 417 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms