RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 GIT1Q9Y2X7 761 aa14.68□□□□□ -0.06
HDAC6-215ENST00000465457 PIAS3Q9Y6X2 628 aa14.68□□□□□ -0.06
HDAC6-215ENST00000465457 DMXL2Q8TDJ6 3036 aa14.67□□□□□ -0.06
HDAC6-215ENST00000465457 LOC400499M0QZD8 3231 aa14.67□□□□□ -0.06
HDAC6-215ENST00000465457 MACROD2A1Z1Q3 448 aa14.67□□□□□ -0.06
HDAC6-215ENST00000465457 ABLIM1O14639 778 aa14.67□□□□□ -0.06
HDAC6-215ENST00000465457 PTGESO14684 152 aa14.67□□□□□ -0.06
HDAC6-215ENST00000465457 FAM189A1O60320 539 aa14.67□□□□□ -0.06
HDAC6-215ENST00000465457 C4BPAP04003 597 aaKnown RBP14.67□□□□□ -0.06
HDAC6-215ENST00000465457 POU2F2P09086 479 aa14.67□□□□□ -0.06
HDAC6-215ENST00000465457 PRLRP16471 622 aa14.67□□□□□ -0.06
HDAC6-215ENST00000465457 TNFAIP3P21580 790 aa14.67□□□□□ -0.06
HDAC6-215ENST00000465457 CCR2P41597 374 aa14.67□□□□□ -0.06
HDAC6-215ENST00000465457 PIK3CAP42336 1068 aa14.67□□□□□ -0.06
HDAC6-215ENST00000465457 CXCL12P48061 93 aa14.67□□□□□ -0.06
HDAC6-215ENST00000465457 ACOT2P49753 483 aa14.67□□□□□ -0.06
HDAC6-215ENST00000465457 BPIFB4P59827 614 aa14.67□□□□□ -0.06
HDAC6-215ENST00000465457 BIRC3Q13489 604 aa14.67□□□□□ -0.06
HDAC6-215ENST00000465457 ARHGAP44Q17R89 818 aa14.67□□□□□ -0.06
HDAC6-215ENST00000465457 PRSS36Q5K4E3 855 aa14.67□□□□□ -0.06
HDAC6-215ENST00000465457 PPP1R2P3Q6NXS1 205 aa14.67□□□□□ -0.06
HDAC6-215ENST00000465457 VITQ6UXI7 678 aa14.67□□□□□ -0.06
HDAC6-215ENST00000465457 UNQ6494/PRO21346Q6UXR6 183 aa14.67□□□□□ -0.06
HDAC6-215ENST00000465457 MAMSTRQ6ZN01 415 aa14.67□□□□□ -0.06
HDAC6-215ENST00000465457 MTERF4Q7Z6M4 381 aaKnown RBP14.67□□□□□ -0.06
HDAC6-215ENST00000465457 ARHGEF19Q8IW93 802 aa14.67□□□□□ -0.06
HDAC6-215ENST00000465457 SLC30A5Q8TAD4 765 aa14.67□□□□□ -0.06
HDAC6-215ENST00000465457 ZSWIM3Q96MP5 696 aa14.67□□□□□ -0.06
HDAC6-215ENST00000465457 SYT11Q9BT88 431 aa14.67□□□□□ -0.06
HDAC6-215ENST00000465457 TMEM121BQ9BXQ6 578 aaPredicted RBP14.67□□□□□ -0.06
HDAC6-215ENST00000465457 TRIM6Q9C030 488 aaPredicted RBP14.67□□□□□ -0.06
HDAC6-215ENST00000465457 TRIM10Q9UDY6 481 aa14.67□□□□□ -0.06
HDAC6-215ENST00000465457 PARP2Q9UGN5 583 aa14.67□□□□□ -0.06
HDAC6-215ENST00000465457 CPSF3Q9UKF6 684 aaKnown RBP14.67□□□□□ -0.06
HDAC6-215ENST00000465457 SAR1BQ9Y6B6 198 aa14.67□□□□□ -0.06
HDAC6-215ENST00000465457 FOXN3O00409 490 aaPredicted RBP14.66□□□□□ -0.06
HDAC6-215ENST00000465457 GIPC1O14908 333 aa14.66□□□□□ -0.06
HDAC6-215ENST00000465457 TOP3BO95985 862 aaKnown RBP14.66□□□□□ -0.06
HDAC6-215ENST00000465457 TMEM253P0C7T8 217 aa14.66□□□□□ -0.06
HDAC6-215ENST00000465457 TCP1P17987 556 aaKnown RBP14.66□□□□□ -0.06
HDAC6-215ENST00000465457 GDI1P31150 447 aa14.66□□□□□ -0.06
HDAC6-215ENST00000465457 SOX9P48436 509 aa14.66□□□□□ -0.06
HDAC6-215ENST00000465457 AMPD2Q01433 879 aa14.66□□□□□ -0.06
HDAC6-215ENST00000465457 NCBP1Q09161 790 aaKnown RBP14.66□□□□□ -0.06
HDAC6-215ENST00000465457 TUSC3Q13454 348 aa14.66□□□□□ -0.06
HDAC6-215ENST00000465457 RAB33AQ14088 237 aa14.66□□□□□ -0.06
HDAC6-215ENST00000465457 ENOX2Q16206 610 aaKnown RBP14.66□□□□□ -0.06
HDAC6-215ENST00000465457 DUOXA2Q1HG44 320 aa14.66□□□□□ -0.06
HDAC6-215ENST00000465457 TRAPPC11Q7Z392 1133 aa14.66□□□□□ -0.06
HDAC6-215ENST00000465457 SEMA4DQ92854 862 aa14.66□□□□□ -0.06
HDAC6-215ENST00000465457 FAXDC2Q96IV6 333 aa14.66□□□□□ -0.06
HDAC6-215ENST00000465457 ZBTB45Q96K62 511 aaPredicted RBP14.66□□□□□ -0.06
HDAC6-215ENST00000465457 AGPAT1Q99943 283 aa14.66□□□□□ -0.06
HDAC6-215ENST00000465457 HAPLN2Q9GZV7 340 aa14.66□□□□□ -0.06
HDAC6-215ENST00000465457 ARRDC1-AS1Q9H2J1 176 aa14.66□□□□□ -0.06
HDAC6-215ENST00000465457 PDE11AQ9HCR9 933 aa14.66□□□□□ -0.06
HDAC6-215ENST00000465457 ZNF334Q9HCZ1 680 aaPredicted RBP14.66□□□□□ -0.06
HDAC6-215ENST00000465457 GDE1Q9NZC3 331 aa14.66□□□□□ -0.06
HDAC6-215ENST00000465457 CDY1Q9Y6F8 540 aa14.66□□□□□ -0.06
HDAC6-215ENST00000465457 TTLL13PA6NNM8 815 aa14.65□□□□□ -0.06
HDAC6-215ENST00000465457 I3L4J1 428 aa14.65□□□□□ -0.06
HDAC6-215ENST00000465457 ARNTLO00327 626 aa14.65□□□□□ -0.06
HDAC6-215ENST00000465457 DDX3XO00571 662 aaKnown RBP eCLIP14.65□□□□□ -0.06
HDAC6-215ENST00000465457 AXIN1O15169 862 aa14.65□□□□□ -0.06
HDAC6-215ENST00000465457 PHACTR2O75167 634 aa14.65□□□□□ -0.06
HDAC6-215ENST00000465457 KCNK5O95279 499 aa14.65□□□□□ -0.06
HDAC6-215ENST00000465457 ABL1P00519 1130 aa14.65□□□□□ -0.06
HDAC6-215ENST00000465457 HLA-DRAP01903 254 aa14.65□□□□□ -0.06
HDAC6-215ENST00000465457 EDN1P05305 212 aa14.65□□□□□ -0.06
HDAC6-215ENST00000465457 CLTAP09496 248 aa14.65□□□□□ -0.06
HDAC6-215ENST00000465457 VIPR2P41587 438 aa14.65□□□□□ -0.06
HDAC6-215ENST00000465457 PDE6CP51160 858 aa14.65□□□□□ -0.06
HDAC6-215ENST00000465457 LIMK1P53667 647 aa14.65□□□□□ -0.06
HDAC6-215ENST00000465457 TDRD10Q5VZ19 366 aaKnown RBP14.65□□□□□ -0.06
HDAC6-215ENST00000465457 TCEAL6Q6IPX3 200 aa14.65□□□□□ -0.06
HDAC6-215ENST00000465457 PSAPL1Q6NUJ1 521 aa14.65□□□□□ -0.06
HDAC6-215ENST00000465457 ZNF677Q86XU0 584 aa14.65□□□□□ -0.06
HDAC6-215ENST00000465457 SYCE1Q8N0S2 351 aa14.65□□□□□ -0.06
HDAC6-215ENST00000465457 CTNNBL1Q8WYA6 563 aaPredicted RBP14.65□□□□□ -0.06
HDAC6-215ENST00000465457 DDX1Q92499 740 aaKnown RBP14.65□□□□□ -0.06
HDAC6-215ENST00000465457 UBXN4Q92575 508 aa14.65□□□□□ -0.06
HDAC6-215ENST00000465457 TAF4BQ92750 862 aa14.65□□□□□ -0.06
HDAC6-215ENST00000465457 GOLGA1Q92805 767 aa14.65□□□□□ -0.06
HDAC6-215ENST00000465457 TCEAL3Q969E4 200 aa14.65□□□□□ -0.06
HDAC6-215ENST00000465457 ADPGKQ9BRR6 497 aa14.65□□□□□ -0.06
HDAC6-215ENST00000465457 CARD6Q9BX69 1037 aa14.65□□□□□ -0.06
HDAC6-215ENST00000465457 TOPORSQ9NS56 1045 aaPredicted RBP14.65□□□□□ -0.06
HDAC6-215ENST00000465457 MTRRQ9UBK8 725 aa14.65□□□□□ -0.06
HDAC6-215ENST00000465457 GCN1Q92616 2671 aaKnown RBP14.65□□□□□ -0.06
HDAC6-215ENST00000465457 NUP205Q92621 2012 aa14.65□□□□□ -0.06
HDAC6-215ENST00000465457 MAN2B1O00754 1011 aa14.64□□□□□ -0.07
HDAC6-215ENST00000465457 TADA3O75528 432 aa14.64□□□□□ -0.07
HDAC6-215ENST00000465457 TNNC2P02585 160 aa14.64□□□□□ -0.07
HDAC6-215ENST00000465457 HARSP12081 509 aaKnown RBP14.64□□□□□ -0.07
HDAC6-215ENST00000465457 GZMAP12544 262 aa14.64□□□□□ -0.07
HDAC6-215ENST00000465457 GJA1P17302 382 aa14.64□□□□□ -0.07
HDAC6-215ENST00000465457 AXLP30530 894 aa14.64□□□□□ -0.07
HDAC6-215ENST00000465457 NAP1L1P55209 391 aaKnown RBP14.64□□□□□ -0.07
HDAC6-215ENST00000465457 PPP2R5DQ14738 602 aa14.64□□□□□ -0.07
HDAC6-215ENST00000465457 DCAF4L1Q3SXM0 396 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms