RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 C1orf228Q6PIY5 440 aa19.11■□□□□ 0.65
SYNE4-204ENST00000465425 FAM183BPQ6ZVS7 135 aa19.11■□□□□ 0.65
SYNE4-204ENST00000465425 LRMDAQ9H2I8 198 aa19.11■□□□□ 0.65
SYNE4-204ENST00000465425 EBF2Q9HAK2 575 aa19.11■□□□□ 0.65
SYNE4-204ENST00000465425 PDGFCQ9NRA1 345 aa19.11■□□□□ 0.65
SYNE4-204ENST00000465425 NOP53Q9NZM5 478 aaKnown RBP19.11■□□□□ 0.65
SYNE4-204ENST00000465425 HAO1Q9UJM8 370 aa19.11■□□□□ 0.65
SYNE4-204ENST00000465425 ITGA11Q9UKX5 1188 aa19.11■□□□□ 0.65
SYNE4-204ENST00000465425 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.11■□□□□ 0.65
SYNE4-204ENST00000465425 TCRBV9S1A1TA0A576 114 aa19.11■□□□□ 0.65
SYNE4-204ENST00000465425 ADM5C9JUS6 153 aa19.11■□□□□ 0.65
SYNE4-204ENST00000465425 LPXNO60711 386 aa19.11■□□□□ 0.65
SYNE4-204ENST00000465425 SPAG6O75602 509 aa19.11■□□□□ 0.65
SYNE4-204ENST00000465425 ENDOD1O94919 500 aa19.11■□□□□ 0.65
SYNE4-204ENST00000465425 ANP32DO95626 131 aa19.11■□□□□ 0.65
SYNE4-204ENST00000465425 ILDR2Q71H61 639 aa19.11■□□□□ 0.65
SYNE4-204ENST00000465425 ERO1BQ86YB8 467 aa19.11■□□□□ 0.65
SYNE4-204ENST00000465425 TTC39CQ8N584 583 aa19.11■□□□□ 0.65
SYNE4-204ENST00000465425 TMEM237Q96Q45 408 aa19.11■□□□□ 0.65
SYNE4-204ENST00000465425 NT5C1AQ9BXI3 368 aa19.11■□□□□ 0.65
SYNE4-204ENST00000465425 VPS11Q9H270 941 aa19.11■□□□□ 0.65
SYNE4-204ENST00000465425 RBPJLQ9UBG7 517 aa19.11■□□□□ 0.65
SYNE4-204ENST00000465425 KIAA1257Q9ULG3 409 aa19.11■□□□□ 0.65
SYNE4-204ENST00000465425 MGAMO43451 1857 aa19.1■□□□□ 0.65
SYNE4-204ENST00000465425 POLR2AP24928 1970 aaKnown RBP19.1■□□□□ 0.65
SYNE4-204ENST00000465425 CHADO15335 359 aa19.1■□□□□ 0.65
SYNE4-204ENST00000465425 DESP17661 470 aa19.1■□□□□ 0.65
SYNE4-204ENST00000465425 ARF4P18085 180 aaPredicted RBP19.1■□□□□ 0.65
SYNE4-204ENST00000465425 RBP5P82980 135 aa19.1■□□□□ 0.65
SYNE4-204ENST00000465425 INCA1Q0VD86 236 aa19.1■□□□□ 0.65
SYNE4-204ENST00000465425 AMHR2Q16671 573 aa19.1■□□□□ 0.65
SYNE4-204ENST00000465425 KBTBD12Q3ZCT8 623 aa19.1■□□□□ 0.65
SYNE4-204ENST00000465425 ZNF449Q6P9G9 518 aa19.1■□□□□ 0.65
SYNE4-204ENST00000465425 LCLAT1Q6UWP7 414 aa19.1■□□□□ 0.65
SYNE4-204ENST00000465425 CCDC125Q86Z20 511 aa19.1■□□□□ 0.65
SYNE4-204ENST00000465425 AGGF1Q8N302 714 aaeCLIP19.1■□□□□ 0.65
SYNE4-204ENST00000465425 N4BP2L2Q92802 583 aaPredicted RBP19.1■□□□□ 0.65
SYNE4-204ENST00000465425 RNF157Q96PX1 679 aa19.1■□□□□ 0.65
SYNE4-204ENST00000465425 MANSC1Q9H8J5 431 aa19.1■□□□□ 0.65
SYNE4-204ENST00000465425 RAB6BQ9NRW1 208 aa19.1■□□□□ 0.65
SYNE4-204ENST00000465425 DPP3Q9NY33 737 aa19.1■□□□□ 0.65
SYNE4-204ENST00000465425 PAK5Q9P286 719 aa19.1■□□□□ 0.65
SYNE4-204ENST00000465425 SLC17A7Q9P2U7 560 aa19.1■□□□□ 0.65
SYNE4-204ENST00000465425 CXCL11O14625 94 aa19.09■□□□□ 0.65
SYNE4-204ENST00000465425 KCNN4O15554 427 aa19.09■□□□□ 0.65
SYNE4-204ENST00000465425 VTNP04004 478 aa19.09■□□□□ 0.65
SYNE4-204ENST00000465425 NEFHP12036 1026 aa19.09■□□□□ 0.65
SYNE4-204ENST00000465425 KCNJ11Q14654 390 aa19.09■□□□□ 0.65
SYNE4-204ENST00000465425 PARP6Q2NL67 630 aa19.09■□□□□ 0.65
SYNE4-204ENST00000465425 ACCSLQ4AC99 568 aa19.09■□□□□ 0.65
SYNE4-204ENST00000465425 NLRP9Q7RTR0 991 aa19.09■□□□□ 0.65
SYNE4-204ENST00000465425 IGDCC3Q8IVU1 814 aa19.09■□□□□ 0.65
SYNE4-204ENST00000465425 ZNF398Q8TD17 642 aa19.09■□□□□ 0.65
SYNE4-204ENST00000465425 INPP5DQ92835 1189 aa19.09■□□□□ 0.65
SYNE4-204ENST00000465425 PIWIL1Q96J94 861 aaKnown RBP19.09■□□□□ 0.65
SYNE4-204ENST00000465425 L3MBTL3Q96JM7 780 aaPredicted RBP19.09■□□□□ 0.65
SYNE4-204ENST00000465425 ZFP69BQ9UJL9 534 aa19.09■□□□□ 0.65
SYNE4-204ENST00000465425 HEY1Q9Y5J3 304 aa19.09■□□□□ 0.65
SYNE4-204ENST00000465425 TEX264Q9Y6I9 313 aa19.09■□□□□ 0.65
SYNE4-204ENST00000465425 C2CD2LO14523 706 aa19.09■□□□□ 0.65
SYNE4-204ENST00000465425 PDK2Q15119 407 aa19.09■□□□□ 0.65
SYNE4-204ENST00000465425 RAB6CQ53S08 254 aa19.09■□□□□ 0.65
SYNE4-204ENST00000465425 SLC45A4Q5BKX6 768 aa19.09■□□□□ 0.65
SYNE4-204ENST00000465425 TRNP1Q6NT89 227 aa19.09■□□□□ 0.65
SYNE4-204ENST00000465425 CYP4V2Q6ZWL3 525 aaPredicted RBP19.09■□□□□ 0.65
SYNE4-204ENST00000465425 SLC44A1Q8WWI5 657 aa19.09■□□□□ 0.65
SYNE4-204ENST00000465425 NLRP7Q8WX94 980 aa19.09■□□□□ 0.65
SYNE4-204ENST00000465425 RSRC1Q96IZ7 334 aaKnown RBP19.09■□□□□ 0.65
SYNE4-204ENST00000465425 ACAP3Q96P50 834 aa19.09■□□□□ 0.65
SYNE4-204ENST00000465425 RAB6CQ9H0N0 254 aa19.09■□□□□ 0.65
SYNE4-204ENST00000465425 C12orf65Q9H3J6 166 aaKnown RBP19.09■□□□□ 0.65
SYNE4-204ENST00000465425 NGRNQ9NPE2 291 aaKnown RBP19.09■□□□□ 0.65
SYNE4-204ENST00000465425 CYLDQ9NQC7 956 aa19.09■□□□□ 0.65
SYNE4-204ENST00000465425 C2CD2Q9Y426 696 aa19.09■□□□□ 0.65
SYNE4-204ENST00000465425 APOL1O14791 398 aa19.08■□□□□ 0.65
SYNE4-204ENST00000465425 RPSAP08865 295 aaKnown RBP19.08■□□□□ 0.65
SYNE4-204ENST00000465425 ELF1P32519 619 aa19.08■□□□□ 0.65
SYNE4-204ENST00000465425 RGS7P49802 495 aa19.08■□□□□ 0.65
SYNE4-204ENST00000465425 BCAR1P56945 870 aa19.08■□□□□ 0.65
SYNE4-204ENST00000465425 STILQ15468 1287 aa19.08■□□□□ 0.65
SYNE4-204ENST00000465425 BOLA3Q53S33 107 aa19.08■□□□□ 0.65
SYNE4-204ENST00000465425 TAF1BQ53T94 588 aaPredicted RBP19.08■□□□□ 0.65
SYNE4-204ENST00000465425 C12orf29Q8N999 325 aa19.08■□□□□ 0.65
SYNE4-204ENST00000465425 CLMNQ96JQ2 1002 aa19.08■□□□□ 0.65
SYNE4-204ENST00000465425 GEMIN8Q9NWZ8 242 aaKnown RBP19.08■□□□□ 0.65
SYNE4-204ENST00000465425 DCTN4Q9UJW0 460 aa19.08■□□□□ 0.65
SYNE4-204ENST00000465425 EVPLQ92817 2033 aa19.08■□□□□ 0.65
SYNE4-204ENST00000465425 ASB14A6NK59 587 aa19.08■□□□□ 0.64
SYNE4-204ENST00000465425 AVILO75366 819 aa19.08■□□□□ 0.64
SYNE4-204ENST00000465425 ZBED1O96006 694 aa19.08■□□□□ 0.64
SYNE4-204ENST00000465425 LGALS2P05162 132 aa19.08■□□□□ 0.64
SYNE4-204ENST00000465425 CYP3A5P20815 502 aa19.08■□□□□ 0.64
SYNE4-204ENST00000465425 GOLGA7BQ2TAP0 167 aa19.08■□□□□ 0.64
SYNE4-204ENST00000465425 PLD5Q8N7P1 536 aa19.08■□□□□ 0.64
SYNE4-204ENST00000465425 NSMCE1Q8WV22 266 aa19.08■□□□□ 0.64
SYNE4-204ENST00000465425 KIF12Q96FN5 646 aa19.08■□□□□ 0.64
SYNE4-204ENST00000465425 CFAP36Q96G28 342 aa19.08■□□□□ 0.64
SYNE4-204ENST00000465425 APOPT1Q96IL0 206 aa19.08■□□□□ 0.64
SYNE4-204ENST00000465425 TRIM55Q9BYV6 548 aa19.08■□□□□ 0.64
SYNE4-204ENST00000465425 FRMD8Q9BZ67 464 aaPredicted RBP19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms