RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 C11orf84Q9BUA3 381 aaPredicted RBP21.14■□□□□ 0.98
CCM2-203ENST00000461377 MAK16Q9BXY0 300 aaKnown RBP21.14■□□□□ 0.98
CCM2-203ENST00000461377 SENP6Q9GZR1 1112 aaPredicted RBP21.14■□□□□ 0.98
CCM2-203ENST00000461377 C10orf88Q9H8K7 445 aa21.14■□□□□ 0.98
CCM2-203ENST00000461377 ST3GAL5Q9UNP4 418 aa21.14■□□□□ 0.98
CCM2-203ENST00000461377 FARP1Q9Y4F1 1045 aaPredicted RBP21.14■□□□□ 0.98
CCM2-203ENST00000461377 MCF2LO15068 1137 aa21.14■□□□□ 0.97
CCM2-203ENST00000461377 FAM163BP0C2L3 166 aa21.14■□□□□ 0.97
CCM2-203ENST00000461377 DESP17661 470 aa21.14■□□□□ 0.97
CCM2-203ENST00000461377 ACADSBP45954 432 aa21.14■□□□□ 0.97
CCM2-203ENST00000461377 SEC24CP53992 1094 aa21.14■□□□□ 0.97
CCM2-203ENST00000461377 PCGF5Q86SE9 256 aa21.14■□□□□ 0.97
CCM2-203ENST00000461377 SERINC5Q86VE9 423 aa21.14■□□□□ 0.97
CCM2-203ENST00000461377 NLRP14Q86W24 1093 aa21.14■□□□□ 0.97
CCM2-203ENST00000461377 VSIG1Q86XK7 387 aa21.14■□□□□ 0.97
CCM2-203ENST00000461377 MAP7D3Q8IWC1 876 aa21.14■□□□□ 0.97
CCM2-203ENST00000461377 CLEC4CQ8WTT0 213 aa21.14■□□□□ 0.97
CCM2-203ENST00000461377 RSAD2Q8WXG1 361 aa21.14■□□□□ 0.97
CCM2-203ENST00000461377 HSFY1Q96LI6 401 aa21.14■□□□□ 0.97
CCM2-203ENST00000461377 RNF157Q96PX1 679 aa21.14■□□□□ 0.97
CCM2-203ENST00000461377 SPC25Q9HBM1 224 aa21.14■□□□□ 0.97
CCM2-203ENST00000461377 SAYSD1Q9NPB0 183 aa21.14■□□□□ 0.97
CCM2-203ENST00000461377 TRAPPC3O43617 180 aa21.13■□□□□ 0.97
CCM2-203ENST00000461377 IL4RP24394 825 aa21.13■□□□□ 0.97
CCM2-203ENST00000461377 TKTP29401 623 aaKnown RBP21.13■□□□□ 0.97
CCM2-203ENST00000461377 HDAC4P56524 1084 aa21.13■□□□□ 0.97
CCM2-203ENST00000461377 PPARDQ03181 441 aa21.13■□□□□ 0.97
CCM2-203ENST00000461377 KRT81Q14533 505 aa21.13■□□□□ 0.97
CCM2-203ENST00000461377 SCYL2Q6P3W7 929 aa21.13■□□□□ 0.97
CCM2-203ENST00000461377 UNC45BQ8IWX7 931 aa21.13■□□□□ 0.97
CCM2-203ENST00000461377 MYCBPAPQ8TBZ2 947 aa21.13■□□□□ 0.97
CCM2-203ENST00000461377 MDM1Q8TC05 714 aa21.13■□□□□ 0.97
CCM2-203ENST00000461377 SPATA18Q8TC71 538 aa21.13■□□□□ 0.97
CCM2-203ENST00000461377 PCDH18Q9HCL0 1135 aa21.13■□□□□ 0.97
CCM2-203ENST00000461377 PPANQ9NQ55 473 aaKnown RBP21.13■□□□□ 0.97
CCM2-203ENST00000461377 CHST12Q9NRB3 414 aa21.13■□□□□ 0.97
CCM2-203ENST00000461377 FAM105AQ9NUU6 356 aa21.13■□□□□ 0.97
CCM2-203ENST00000461377 MEIS3P2A8K0S8 358 aa21.12■□□□□ 0.97
CCM2-203ENST00000461377 MDM4O15151 490 aa21.12■□□□□ 0.97
CCM2-203ENST00000461377 SEPT4O43236 478 aa21.12■□□□□ 0.97
CCM2-203ENST00000461377 CHRNA1P02708 482 aa21.12■□□□□ 0.97
CCM2-203ENST00000461377 RBP3P10745 1247 aa21.12■□□□□ 0.97
CCM2-203ENST00000461377 RPL22P35268 128 aaKnown RBP21.12■□□□□ 0.97
CCM2-203ENST00000461377 FLT3LGP49771 235 aa21.12■□□□□ 0.97
CCM2-203ENST00000461377 MGAT3Q09327 533 aa21.12■□□□□ 0.97
CCM2-203ENST00000461377 STAT4Q14765 748 aa21.12■□□□□ 0.97
CCM2-203ENST00000461377 NPNTQ6UXI9 565 aa21.12■□□□□ 0.97
CCM2-203ENST00000461377 RPAINQ86UA6 219 aa21.12■□□□□ 0.97
CCM2-203ENST00000461377 B3GALNT2Q8NCR0 500 aa21.12■□□□□ 0.97
CCM2-203ENST00000461377 CENPIQ92674 756 aaPredicted RBP21.12■□□□□ 0.97
CCM2-203ENST00000461377 TTC25Q96NG3 672 aa21.12■□□□□ 0.97
CCM2-203ENST00000461377 HNRNPABQ99729 332 aaKnown RBP21.12■□□□□ 0.97
CCM2-203ENST00000461377 SELENOSQ9BQE4 189 aa21.12■□□□□ 0.97
CCM2-203ENST00000461377 SNRNP25Q9BV90 132 aaKnown RBP21.12■□□□□ 0.97
CCM2-203ENST00000461377 SLC38A7Q9NVC3 462 aa21.12■□□□□ 0.97
CCM2-203ENST00000461377 GPATCH2LQ9NWQ4 482 aa21.12■□□□□ 0.97
CCM2-203ENST00000461377 E7EVH7 732 aa21.12■□□□□ 0.97
CCM2-203ENST00000461377 CYB561D2O14569 222 aa21.12■□□□□ 0.97
CCM2-203ENST00000461377 XPO1O14980 1071 aaKnown RBP21.12■□□□□ 0.97
CCM2-203ENST00000461377 FAM107AO95990 144 aa21.12■□□□□ 0.97
CCM2-203ENST00000461377 CTSHP09668 335 aa21.12■□□□□ 0.97
CCM2-203ENST00000461377 RARBP10826 455 aa21.12■□□□□ 0.97
CCM2-203ENST00000461377 LCP1P13796 627 aa21.12■□□□□ 0.97
CCM2-203ENST00000461377 CTCFP49711 727 aaPredicted RBP21.12■□□□□ 0.97
CCM2-203ENST00000461377 ZC3H12AQ5D1E8 599 aaKnown RBP21.12■□□□□ 0.97
CCM2-203ENST00000461377 TAOK1Q7L7X3 1001 aa21.12■□□□□ 0.97
CCM2-203ENST00000461377 EXOC3L1Q86VI1 746 aa21.12■□□□□ 0.97
CCM2-203ENST00000461377 PPIL6Q8IXY8 311 aa21.12■□□□□ 0.97
CCM2-203ENST00000461377 GSTCDQ8NEC7 633 aa21.12■□□□□ 0.97
CCM2-203ENST00000461377 ZNF473Q8WTR7 871 aaKnown RBP21.12■□□□□ 0.97
CCM2-203ENST00000461377 CCT8L2Q96SF2 557 aa21.12■□□□□ 0.97
CCM2-203ENST00000461377 LGALS13Q9UHV8 139 aa21.12■□□□□ 0.97
CCM2-203ENST00000461377 GMNCA6NCL1 334 aa21.11■□□□□ 0.97
CCM2-203ENST00000461377 ADAMTS4O75173 837 aa21.11■□□□□ 0.97
CCM2-203ENST00000461377 CHN1P15882 459 aa21.11■□□□□ 0.97
CCM2-203ENST00000461377 TFE3P19532 575 aaPredicted RBP21.11■□□□□ 0.97
CCM2-203ENST00000461377 ATP5DP30049 168 aa21.11■□□□□ 0.97
CCM2-203ENST00000461377 TRIM32Q13049 653 aa21.11■□□□□ 0.97
CCM2-203ENST00000461377 CA9Q16790 459 aa21.11■□□□□ 0.97
CCM2-203ENST00000461377 HACE1Q8IYU2 909 aa21.11■□□□□ 0.97
CCM2-203ENST00000461377 CPT1BQ92523 772 aa21.11■□□□□ 0.97
CCM2-203ENST00000461377 PHACTR1Q9C0D0 580 aa21.11■□□□□ 0.97
CCM2-203ENST00000461377 TSPYL2Q9H2G4 693 aaPredicted RBP21.11■□□□□ 0.97
CCM2-203ENST00000461377 ZNF487B1APH4 448 aa21.1■□□□□ 0.97
CCM2-203ENST00000461377 EBAG9O00559 213 aa21.1■□□□□ 0.97
CCM2-203ENST00000461377 GABRDO14764 452 aa21.1■□□□□ 0.97
CCM2-203ENST00000461377 ALOX15BO15296 676 aa21.1■□□□□ 0.97
CCM2-203ENST00000461377 RPLP2P05387 115 aaKnown RBP21.1■□□□□ 0.97
CCM2-203ENST00000461377 MLH1P40692 756 aa21.1■□□□□ 0.97
CCM2-203ENST00000461377 ROR1Q01973 937 aa21.1■□□□□ 0.97
CCM2-203ENST00000461377 ANKRD20A8PQ5CZ79 823 aa21.1■□□□□ 0.97
CCM2-203ENST00000461377 ERMARDQ5T6L9 678 aa21.1■□□□□ 0.97
CCM2-203ENST00000461377 WSCD1Q658N2 575 aa21.1■□□□□ 0.97
CCM2-203ENST00000461377 CYP4F22Q6NT55 531 aa21.1■□□□□ 0.97
CCM2-203ENST00000461377 CENPUQ71F23 418 aa21.1■□□□□ 0.97
CCM2-203ENST00000461377 FUKQ8N0W3 1084 aa21.1■□□□□ 0.97
CCM2-203ENST00000461377 PQLC3Q8N755 202 aa21.1■□□□□ 0.97
CCM2-203ENST00000461377 NAT8LQ8N9F0 302 aa21.1■□□□□ 0.97
CCM2-203ENST00000461377 FAM71DQ8N9W8 422 aa21.1■□□□□ 0.97
CCM2-203ENST00000461377 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms