RNA–Protein interactions for RNA: ENST00000456173.6

NEDD4L-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4L, Length 4,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-208ENST00000456173 BBS5Q8N3I7 341 aa12.76□□□□□ -0.37
NEDD4L-208ENST00000456173 PTPRN2Q92932 1015 aa12.76□□□□□ -0.37
NEDD4L-208ENST00000456173 ZNF669Q96BR6 464 aaPredicted RBP12.76□□□□□ -0.37
NEDD4L-208ENST00000456173 NARS2Q96I59 477 aaKnown RBP12.76□□□□□ -0.37
NEDD4L-208ENST00000456173 KLHL32Q96NJ5 620 aa12.76□□□□□ -0.37
NEDD4L-208ENST00000456173 PPP1R16BQ96T49 567 aa12.76□□□□□ -0.37
NEDD4L-208ENST00000456173 THAP1Q9NVV9 213 aa12.76□□□□□ -0.37
NEDD4L-208ENST00000456173 IMPAD1Q9NX62 359 aa12.76□□□□□ -0.37
NEDD4L-208ENST00000456173 GIN1Q9NXP7 522 aa12.76□□□□□ -0.37
NEDD4L-208ENST00000456173 PTTG2Q9NZH5 202 aa12.76□□□□□ -0.37
NEDD4L-208ENST00000456173 LRRC10BA6NIK2 292 aa12.76□□□□□ -0.37
NEDD4L-208ENST00000456173 KIAA0391O15091 583 aaKnown RBP12.76□□□□□ -0.37
NEDD4L-208ENST00000456173 ZBTB11O95625 1053 aaPredicted RBP12.76□□□□□ -0.37
NEDD4L-208ENST00000456173 CASP4P49662 377 aa12.76□□□□□ -0.37
NEDD4L-208ENST00000456173 PDK4Q16654 411 aa12.76□□□□□ -0.37
NEDD4L-208ENST00000456173 DGKDQ16760 1214 aa12.76□□□□□ -0.37
NEDD4L-208ENST00000456173 ATG9AQ7Z3C6 839 aa12.76□□□□□ -0.37
NEDD4L-208ENST00000456173 TRIM69Q86WT6 500 aa12.76□□□□□ -0.37
NEDD4L-208ENST00000456173 PI4K2AQ9BTU6 479 aa12.76□□□□□ -0.37
NEDD4L-208ENST00000456173 KBTBD4Q9NVX7 518 aa12.76□□□□□ -0.37
NEDD4L-208ENST00000456173 PLA2R1Q13018 1463 aa12.76□□□□□ -0.37
NEDD4L-208ENST00000456173 EYA4O95677 639 aa12.76□□□□□ -0.37
NEDD4L-208ENST00000456173 EIF2S1P05198 315 aaKnown RBP12.76□□□□□ -0.37
NEDD4L-208ENST00000456173 PIGHQ14442 188 aaPredicted RBP12.76□□□□□ -0.37
NEDD4L-208ENST00000456173 KRT72Q14CN4 511 aa12.76□□□□□ -0.37
NEDD4L-208ENST00000456173 ARL13BQ3SXY8 428 aa12.76□□□□□ -0.37
NEDD4L-208ENST00000456173 OTOAQ7RTW8 1153 aa12.76□□□□□ -0.37
NEDD4L-208ENST00000456173 STK32CQ86UX6 486 aa12.76□□□□□ -0.37
NEDD4L-208ENST00000456173 PARP8Q8N3A8 854 aa12.76□□□□□ -0.37
NEDD4L-208ENST00000456173 SMAD5Q99717 465 aaKnown RBP12.76□□□□□ -0.37
NEDD4L-208ENST00000456173 DUSP9Q99956 384 aaKnown RBP12.76□□□□□ -0.37
NEDD4L-208ENST00000456173 GPATCH1Q9BRR8 931 aaKnown RBP12.76□□□□□ -0.37
NEDD4L-208ENST00000456173 OSBPL6Q9BZF3 934 aa12.76□□□□□ -0.37
NEDD4L-208ENST00000456173 WASF2Q9Y6W5 498 aa12.76□□□□□ -0.37
NEDD4L-208ENST00000456173 PIPSLA2A3N6 862 aa12.76□□□□□ -0.37
NEDD4L-208ENST00000456173 PIAS1O75925 651 aa12.76□□□□□ -0.37
NEDD4L-208ENST00000456173 GNL1P36915 607 aaPredicted RBP12.76□□□□□ -0.37
NEDD4L-208ENST00000456173 AVPR1AP37288 418 aa12.76□□□□□ -0.37
NEDD4L-208ENST00000456173 SERPINH1P50454 418 aaKnown RBP12.76□□□□□ -0.37
NEDD4L-208ENST00000456173 SLC5A3P53794 718 aa12.76□□□□□ -0.37
NEDD4L-208ENST00000456173 FAAP100Q0VG06 881 aa12.76□□□□□ -0.37
NEDD4L-208ENST00000456173 LRRC8DQ7L1W4 858 aa12.76□□□□□ -0.37
NEDD4L-208ENST00000456173 PTAR1Q7Z6K3 402 aaPredicted RBP12.76□□□□□ -0.37
NEDD4L-208ENST00000456173 CCDC17Q96LX7 622 aa12.76□□□□□ -0.37
NEDD4L-208ENST00000456173 EGFL8Q99944 293 aa12.76□□□□□ -0.37
NEDD4L-208ENST00000456173 TRIM8Q9BZR9 551 aa12.76□□□□□ -0.37
NEDD4L-208ENST00000456173 CDK12Q9NYV4 1490 aaPredicted RBP12.75□□□□□ -0.37
NEDD4L-208ENST00000456173 S100A9P06702 114 aaKnown RBP12.75□□□□□ -0.37
NEDD4L-208ENST00000456173 PDGFRAP16234 1089 aa12.75□□□□□ -0.37
NEDD4L-208ENST00000456173 PWP1Q13610 501 aa12.75□□□□□ -0.37
NEDD4L-208ENST00000456173 NKX1-1Q15270 411 aaPredicted RBP12.75□□□□□ -0.37
NEDD4L-208ENST00000456173 PDZK1Q5T2W1 519 aa12.75□□□□□ -0.37
NEDD4L-208ENST00000456173 N4BP2L1Q5TBK1 243 aaPredicted RBP12.75□□□□□ -0.37
NEDD4L-208ENST00000456173 CCDC33Q8N5R6 958 aa12.75□□□□□ -0.37
NEDD4L-208ENST00000456173 SH3RF3Q8TEJ3 882 aaPredicted RBP12.75□□□□□ -0.37
NEDD4L-208ENST00000456173 LXNQ9BS40 222 aa12.75□□□□□ -0.37
NEDD4L-208ENST00000456173 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.75□□□□□ -0.37
NEDD4L-208ENST00000456173 SPEF1Q9Y4P9 236 aa12.75□□□□□ -0.37
NEDD4L-208ENST00000456173 ABCB11O95342 1321 aa12.75□□□□□ -0.37
NEDD4L-208ENST00000456173 ADGRA2Q96PE1 1338 aa12.75□□□□□ -0.37
NEDD4L-208ENST00000456173 RBM47A0AV96 593 aaKnown RBP12.75□□□□□ -0.37
NEDD4L-208ENST00000456173 VWA5AO00534 786 aa12.75□□□□□ -0.37
NEDD4L-208ENST00000456173 CLASP2O75122 1294 aaKnown RBP12.75□□□□□ -0.37
NEDD4L-208ENST00000456173 CCNKO75909 580 aa12.75□□□□□ -0.37
NEDD4L-208ENST00000456173 PRDX5P30044 214 aa12.75□□□□□ -0.37
NEDD4L-208ENST00000456173 CCNG2Q16589 344 aa12.75□□□□□ -0.37
NEDD4L-208ENST00000456173 ACAD10Q6JQN1 1059 aa12.75□□□□□ -0.37
NEDD4L-208ENST00000456173 NCCRP1Q6ZVX7 275 aaPredicted RBP12.75□□□□□ -0.37
NEDD4L-208ENST00000456173 PCDH20Q8N6Y1 951 aaKnown RBP12.75□□□□□ -0.37
NEDD4L-208ENST00000456173 FEZF2Q8TBJ5 459 aa12.75□□□□□ -0.37
NEDD4L-208ENST00000456173 RPF1Q9H9Y2 349 aaKnown RBP12.75□□□□□ -0.37
NEDD4L-208ENST00000456173 HPS4Q9NQG7 708 aa12.75□□□□□ -0.37
NEDD4L-208ENST00000456173 C2CD2LO14523 706 aa12.75□□□□□ -0.37
NEDD4L-208ENST00000456173 ALADP13716 330 aa12.75□□□□□ -0.37
NEDD4L-208ENST00000456173 FAM47CQ5HY64 1035 aa12.75□□□□□ -0.37
NEDD4L-208ENST00000456173 SLC10A5Q5PT55 438 aa12.75□□□□□ -0.37
NEDD4L-208ENST00000456173 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.75□□□□□ -0.373e-6■■■■■ 35.3
NEDD4L-208ENST00000456173 PWWP2AQ96N64 755 aa12.75□□□□□ -0.37
NEDD4L-208ENST00000456173 DCLK3Q9C098 648 aa12.75□□□□□ -0.37
NEDD4L-208ENST00000456173 KIAA1586Q9HCI6 787 aa12.75□□□□□ -0.37
NEDD4L-208ENST00000456173 ERVV-2B6SEH9 535 aa12.74□□□□□ -0.37
NEDD4L-208ENST00000456173 GRAP2O75791 330 aa12.74□□□□□ -0.37
NEDD4L-208ENST00000456173 IL12AP29459 219 aa12.74□□□□□ -0.37
NEDD4L-208ENST00000456173 NFYCQ13952 458 aa12.74□□□□□ -0.37
NEDD4L-208ENST00000456173 CLNKQ7Z7G1 428 aa12.74□□□□□ -0.37
NEDD4L-208ENST00000456173 MAGEE2Q8TD90 523 aaPredicted RBP12.74□□□□□ -0.37
NEDD4L-208ENST00000456173 HSPBAP1Q96EW2 488 aa12.74□□□□□ -0.37
NEDD4L-208ENST00000456173 SYT15Q9BQS2 421 aa12.74□□□□□ -0.37
NEDD4L-208ENST00000456173 PIDD1Q9HB75 910 aa12.74□□□□□ -0.37
NEDD4L-208ENST00000456173 SALL3Q9BXA9 1300 aa12.74□□□□□ -0.37
NEDD4L-208ENST00000456173 PNMA8CA0A1B0GUJ8 204 aa12.74□□□□□ -0.37
NEDD4L-208ENST00000456173 FOXO6A8MYZ6 492 aa12.74□□□□□ -0.37
NEDD4L-208ENST00000456173 MAGEA8P43361 318 aa12.74□□□□□ -0.37
NEDD4L-208ENST00000456173 ZNF846Q147U1 533 aa12.74□□□□□ -0.37
NEDD4L-208ENST00000456173 ANGPT1Q15389 498 aa12.74□□□□□ -0.37
NEDD4L-208ENST00000456173 PACS1Q6VY07 963 aa12.74□□□□□ -0.37
NEDD4L-208ENST00000456173 CLK4Q9HAZ1 481 aaKnown RBP12.74□□□□□ -0.37
NEDD4L-208ENST00000456173 CHST7Q9NS84 486 aa12.74□□□□□ -0.37
NEDD4L-208ENST00000456173 PNPLA3Q9NST1 481 aa12.74□□□□□ -0.37
NEDD4L-208ENST00000456173 CDV3Q9UKY7 258 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms