RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 CCP110O43303 1012 aa4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 STX6O43752 255 aa4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 MYO1BO43795 1136 aa4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 FKTNO75072 461 aa4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 APOL3O95236 402 aa4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 FTCDO95954 541 aa4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 ANXA1P04083 346 aa4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 AMY2AP04746 511 aa4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 SYPP08247 313 aa4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 PDHBP11177 359 aa4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 GNAT1P11488 350 aa4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 TYRP14679 529 aa4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 PTPN2P17706 415 aa4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 AMY2BP19961 511 aa4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 NFKBIAP25963 317 aa4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 RPL10P27635 214 aaKnown RBP4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 GGT5P36269 586 aa4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 PSMB10P40306 273 aa4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 ASMTP46597 345 aa4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 CAPZA2P47755 286 aa4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 LMAN1P49257 510 aa4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 DEUP1Q05D60 604 aa4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 DDR1Q08345 913 aa4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 RPA4Q13156 261 aa4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 SGCGQ13326 291 aa4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 TUSC3Q13454 348 aa4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 FZD5Q13467 585 aa4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 CAMK2DQ13557 499 aa4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 EPHA7Q15375 998 aa4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 TBCCQ15814 346 aa4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 MLANAQ16655 118 aa4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 TIGD5Q53EQ6 642 aa4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 CAVIN4Q5BKX8 364 aa4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 GARNL3Q5VVW2 1013 aa4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 MFSD5Q6N075 450 aa4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 CAVIN1Q6NZI2 390 aaKnown RBP4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 WDR93Q6P2C0 686 aa4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 GBP6Q6ZN66 633 aa4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 UNC13DQ70J99 1090 aa4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 CCDC186Q7Z3E2 898 aa4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 TUSC5Q8IXB3 177 aa4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 PEX5LQ8IYB4 626 aa4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 ULK2Q8IYT8 1036 aa4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 SCML4Q8N228 414 aa4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 CELF5Q8N6W0 485 aaKnown RBP4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 CHST13Q8NET6 341 aa4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 OR6J1Q8NGC5 347 aa4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 SPATA20Q8TB22 786 aa4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 SEPT1Q8WYJ6 367 aa4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 FATE1Q969F0 183 aa4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 NMD3Q96D46 503 aaKnown RBP4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 RMDN1Q96DB5 314 aa4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 PGAP3Q96FM1 320 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 APOPT1Q96IL0 206 aa4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 RAB3IPQ96QF0 476 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 GDF15Q99988 308 aa4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 LBHD1Q9BQE6 289 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 USP44Q9H0E7 712 aa4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 AP5M1Q9H0R1 490 aa4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 WNT8AQ9H1J5 351 aa4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 POFUT1Q9H488 388 aa4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 PRDM12Q9H4Q4 367 aa4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 MROH8Q9H579 483 aa4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 PFDN4Q9NQP4 134 aa4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 PRDM8Q9NQV8 689 aa4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 HCFC1R1Q9NWW0 138 aa4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 FAM53CQ9NYF3 392 aa4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 TAS2R3Q9NYW6 316 aa4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 PRR13Q9NZ81 148 aa4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 NDUFAF4Q9P032 175 aa4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 EXTL2Q9UBQ6 330 aa4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 DNAJB9Q9UBS3 223 aa4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 MINPP1Q9UNW1 487 aa4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 NAALADL1Q9UQQ1 740 aa4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 ZNF281Q9Y2X9 895 aa4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 CAB39Q9Y376 341 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 POMT1Q9Y6A1 747 aa4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 SQORQ9Y6N5 450 aa4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 RAD54L2Q9Y4B4 1467 aa4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 RNF103-CHMP3A0A140T963 221 aa4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 A0A1W2PQ09 198 aa4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 SSU72P8A0A1W2PR75 194 aa4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 RNF103O00237 685 aa4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 CEP104O60308 925 aa4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 NEMFO60524 1076 aa4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 PHF2O75151 1096 aa4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 DDHD2O94830 711 aa4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 REC8O95072 547 aa4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 CCNDBP1O95273 360 aa4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 ADCY5O95622 1261 aa4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 F9P00740 461 aa4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 CNPP09543 421 aaKnown RBP4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 UBL4AP11441 157 aa4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 GSPT1P15170 499 aaKnown RBP4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 NPPBP16860 134 aa4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 TMEM11P17152 192 aa4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 IL10P22301 178 aa4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 KELP23276 732 aa4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 PAX7P23759 505 aa4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 GABRB3P28472 473 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms