RNA–Protein interactions for RNA: ENST00000452226.5

PDLIM2-214, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2

Gene PDLIM2, Length 845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-214ENST00000452226 SEMA4GQ9NTN9 838 aa19.55■□□□□ 0.72
PDLIM2-214ENST00000452226 POLR3BQ9NW08 1133 aaPredicted RBP19.55■□□□□ 0.72
PDLIM2-214ENST00000452226 KIAA1549LQ6ZVL6 1849 aa19.55■□□□□ 0.72
PDLIM2-214ENST00000452226 CNOT1A5YKK6 2376 aaKnown RBP19.54■□□□□ 0.72
PDLIM2-214ENST00000452226 DCDC2BA2VCK2 349 aa19.54■□□□□ 0.72
PDLIM2-214ENST00000452226 LEFTY2O00292 366 aa19.54■□□□□ 0.72
PDLIM2-214ENST00000452226 CETN3O15182 167 aa19.54■□□□□ 0.72
PDLIM2-214ENST00000452226 NFATC1O95644 943 aa19.54■□□□□ 0.72
PDLIM2-214ENST00000452226 PPP1R2P41236 205 aa19.54■□□□□ 0.72
PDLIM2-214ENST00000452226 SLC7A9P82251 487 aa19.54■□□□□ 0.72
PDLIM2-214ENST00000452226 LRRC63Q05C16 580 aa19.54■□□□□ 0.72
PDLIM2-214ENST00000452226 IFRD2Q12894 506 aaPredicted RBP19.54■□□□□ 0.72
PDLIM2-214ENST00000452226 NCOA4Q13772 614 aa19.54■□□□□ 0.72
PDLIM2-214ENST00000452226 ZNF667Q5HYK9 610 aa19.54■□□□□ 0.72
PDLIM2-214ENST00000452226 ISM2Q6H9L7 571 aa19.54■□□□□ 0.72
PDLIM2-214ENST00000452226 SV2AQ7L0J3 742 aa19.54■□□□□ 0.72
PDLIM2-214ENST00000452226 RPLP0P6Q8NHW5 317 aa19.54■□□□□ 0.72
PDLIM2-214ENST00000452226 GAB3Q8WWW8 586 aa19.54■□□□□ 0.72
PDLIM2-214ENST00000452226 DHTKD1Q96HY7 919 aaPredicted RBP19.54■□□□□ 0.72
PDLIM2-214ENST00000452226 SLITRK1Q96PX8 696 aa19.54■□□□□ 0.72
PDLIM2-214ENST00000452226 TPRP12270 2363 aaKnown RBP19.53■□□□□ 0.72
PDLIM2-214ENST00000452226 PPP1R3GB7ZBB8 358 aa19.53■□□□□ 0.72
PDLIM2-214ENST00000452226 RPP40O75818 363 aaKnown RBP19.53■□□□□ 0.72
PDLIM2-214ENST00000452226 RAP1GAPP47736 663 aa19.53■□□□□ 0.72
PDLIM2-214ENST00000452226 FKBP3Q00688 224 aaKnown RBP19.53■□□□□ 0.72
PDLIM2-214ENST00000452226 CSRP2Q16527 193 aa19.53■□□□□ 0.72
PDLIM2-214ENST00000452226 FOXR2Q6PJQ5 311 aa19.53■□□□□ 0.72
PDLIM2-214ENST00000452226 SCARA5Q6ZMJ2 495 aa19.53■□□□□ 0.72
PDLIM2-214ENST00000452226 CAMKK1Q8N5S9 505 aa19.53■□□□□ 0.72
PDLIM2-214ENST00000452226 DDX1Q92499 740 aaKnown RBP19.53■□□□□ 0.72
PDLIM2-214ENST00000452226 EZH1Q92800 747 aaPredicted RBP19.53■□□□□ 0.72
PDLIM2-214ENST00000452226 ELMO3Q96BJ8 720 aa19.53■□□□□ 0.72
PDLIM2-214ENST00000452226 EEF2KMTQ96G04 330 aa19.53■□□□□ 0.72
PDLIM2-214ENST00000452226 TSG101Q99816 390 aa19.53■□□□□ 0.72
PDLIM2-214ENST00000452226 SMPD4Q9NXE4 827 aa19.53■□□□□ 0.72
PDLIM2-214ENST00000452226 KIAA1468Q9P260 1216 aa19.53■□□□□ 0.72
PDLIM2-214ENST00000452226 CPQQ9Y646 472 aa19.53■□□□□ 0.72
PDLIM2-214ENST00000452226 ATP8B3O60423 1300 aa19.52■□□□□ 0.72
PDLIM2-214ENST00000452226 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.52■□□□□ 0.72
PDLIM2-214ENST00000452226 TRIM49BA6NDI0 452 aa19.52■□□□□ 0.72
PDLIM2-214ENST00000452226 PSMA7O14818 248 aa19.52■□□□□ 0.72
PDLIM2-214ENST00000452226 OLFM2O95897 454 aa19.52■□□□□ 0.72
PDLIM2-214ENST00000452226 OAS1P00973 400 aaKnown RBP19.52■□□□□ 0.72
PDLIM2-214ENST00000452226 CCDC192P0DO97 292 aa19.52■□□□□ 0.72
PDLIM2-214ENST00000452226 KRT13P13646 458 aa19.52■□□□□ 0.72
PDLIM2-214ENST00000452226 YWHAQP27348 245 aa19.52■□□□□ 0.72
PDLIM2-214ENST00000452226 PPP3CAQ08209 521 aa19.52■□□□□ 0.72
PDLIM2-214ENST00000452226 STIM1Q13586 685 aa19.52■□□□□ 0.72
PDLIM2-214ENST00000452226 PRR23CQ6ZRP0 262 aa19.52■□□□□ 0.72
PDLIM2-214ENST00000452226 SYT13Q7L8C5 426 aa19.52■□□□□ 0.72
PDLIM2-214ENST00000452226 CACNA2D4Q7Z3S7 1137 aa19.52■□□□□ 0.72
PDLIM2-214ENST00000452226 FILIP1Q7Z7B0 1213 aa19.52■□□□□ 0.72
PDLIM2-214ENST00000452226 NUP93Q8N1F7 819 aa19.52■□□□□ 0.72
PDLIM2-214ENST00000452226 TNIP3Q96KP6 325 aa19.52■□□□□ 0.72
PDLIM2-214ENST00000452226 HHIPQ96QV1 700 aa19.52■□□□□ 0.72
PDLIM2-214ENST00000452226 MED10Q9BTT4 135 aa19.52■□□□□ 0.72
PDLIM2-214ENST00000452226 LMBRD1Q9NUN5 540 aa19.52■□□□□ 0.72
PDLIM2-214ENST00000452226 MYO18AQ92614 2054 aaKnown RBP19.52■□□□□ 0.71
PDLIM2-214ENST00000452226 SLC30A4O14863 429 aa19.51■□□□□ 0.71
PDLIM2-214ENST00000452226 AXIN1O15169 862 aa19.51■□□□□ 0.71
PDLIM2-214ENST00000452226 SLC16A3O15427 465 aaKnown RBP19.51■□□□□ 0.71
PDLIM2-214ENST00000452226 RTN3O95197 1032 aaPredicted RBP19.51■□□□□ 0.71
PDLIM2-214ENST00000452226 TRIM49P0CI25 452 aa19.51■□□□□ 0.71
PDLIM2-214ENST00000452226 TRIM49CP0CI26 452 aa19.51■□□□□ 0.71
PDLIM2-214ENST00000452226 CAMK4Q16566 473 aa19.51■□□□□ 0.71
PDLIM2-214ENST00000452226 SGSM1Q2NKQ1 1148 aa19.51■□□□□ 0.71
PDLIM2-214ENST00000452226 FAM35AQ86V20 835 aa19.51■□□□□ 0.71
PDLIM2-214ENST00000452226 KBTBD6Q86V97 674 aa19.51■□□□□ 0.71
PDLIM2-214ENST00000452226 KIAA1958Q8N8K9 716 aa19.51■□□□□ 0.71
PDLIM2-214ENST00000452226 TRIML1Q8N9V2 468 aa19.51■□□□□ 0.71
PDLIM2-214ENST00000452226 TAF4BQ92750 862 aa19.51■□□□□ 0.71
PDLIM2-214ENST00000452226 FBXO32Q969P5 355 aa19.51■□□□□ 0.71
PDLIM2-214ENST00000452226 ACDQ96AP0 544 aa19.51■□□□□ 0.71
PDLIM2-214ENST00000452226 CNTNAP3BQ96NU0 1288 aa19.51■□□□□ 0.71
PDLIM2-214ENST00000452226 KCNK16Q96T55 309 aa19.51■□□□□ 0.71
PDLIM2-214ENST00000452226 CNTNAP3Q9BZ76 1288 aa19.51■□□□□ 0.71
PDLIM2-214ENST00000452226 SDCBP2Q9H190 292 aa19.51■□□□□ 0.71
PDLIM2-214ENST00000452226 CFAP97Q9P2B7 532 aa19.51■□□□□ 0.71
PDLIM2-214ENST00000452226 BIN1O00499 593 aa19.5■□□□□ 0.71
PDLIM2-214ENST00000452226 SLC9A3R1O14745 358 aaPredicted RBP19.5■□□□□ 0.71
PDLIM2-214ENST00000452226 SCAMP3O14828 347 aaKnown RBP19.5■□□□□ 0.71
PDLIM2-214ENST00000452226 ASS1P00966 412 aaKnown RBP19.5■□□□□ 0.71
PDLIM2-214ENST00000452226 HLA-DRAP01903 254 aa19.5■□□□□ 0.71
PDLIM2-214ENST00000452226 CYP17A1P05093 508 aa19.5■□□□□ 0.71
PDLIM2-214ENST00000452226 EPB41P11171 864 aaKnown RBP19.5■□□□□ 0.71
PDLIM2-214ENST00000452226 MBL2P11226 248 aaPredicted RBP19.5■□□□□ 0.71
PDLIM2-214ENST00000452226 P4HA1P13674 534 aa19.5■□□□□ 0.71
PDLIM2-214ENST00000452226 GTF2H1P32780 548 aa19.5■□□□□ 0.71
PDLIM2-214ENST00000452226 OPRD1P41143 372 aa19.5■□□□□ 0.71
PDLIM2-214ENST00000452226 GCLMP48507 274 aa19.5■□□□□ 0.71
PDLIM2-214ENST00000452226 DMC1Q14565 340 aa19.5■□□□□ 0.71
PDLIM2-214ENST00000452226 GAB4Q2WGN9 574 aa19.5■□□□□ 0.71
PDLIM2-214ENST00000452226 TTI2Q6NXR4 508 aa19.5■□□□□ 0.71
PDLIM2-214ENST00000452226 PAQR9Q6ZVX9 377 aa19.5■□□□□ 0.71
PDLIM2-214ENST00000452226 ACOT1Q86TX2 421 aa19.5■□□□□ 0.71
PDLIM2-214ENST00000452226 ADGRG2Q8IZP9 1017 aa19.5■□□□□ 0.71
PDLIM2-214ENST00000452226 PDZD8Q8NEN9 1154 aa19.5■□□□□ 0.71
PDLIM2-214ENST00000452226 CCDC26Q8TAB7 109 aa19.5■□□□□ 0.71
PDLIM2-214ENST00000452226 SCAMP5Q8TAC9 235 aa19.5■□□□□ 0.71
PDLIM2-214ENST00000452226 OVCA2Q8WZ82 227 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms