RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 RNF40O75150 1001 aa14.62□□□□□ -0.07
PDLIM2-213ENST00000448520 TADA3O75528 432 aa14.62□□□□□ -0.07
PDLIM2-213ENST00000448520 CAVIN2O95810 425 aa14.62□□□□□ -0.07
PDLIM2-213ENST00000448520 CKMP06732 381 aa14.62□□□□□ -0.07
PDLIM2-213ENST00000448520 ADRB1P08588 477 aa14.62□□□□□ -0.07
PDLIM2-213ENST00000448520 HDCP19113 662 aa14.62□□□□□ -0.07
PDLIM2-213ENST00000448520 RAP1GAPP47736 663 aa14.62□□□□□ -0.07
PDLIM2-213ENST00000448520 PPP3CCP48454 512 aa14.62□□□□□ -0.07
PDLIM2-213ENST00000448520 IFNAR2P48551 515 aa14.62□□□□□ -0.07
PDLIM2-213ENST00000448520 LIMK1P53667 647 aa14.62□□□□□ -0.07
PDLIM2-213ENST00000448520 ZNF77Q15935 545 aa14.62□□□□□ -0.07
PDLIM2-213ENST00000448520 DCAF17Q5H9S7 520 aaPredicted RBP14.62□□□□□ -0.07
PDLIM2-213ENST00000448520 PKN3Q6P5Z2 889 aa14.62□□□□□ -0.07
PDLIM2-213ENST00000448520 SYT13Q7L8C5 426 aa14.62□□□□□ -0.07
PDLIM2-213ENST00000448520 KIAA1958Q8N8K9 716 aa14.62□□□□□ -0.07
PDLIM2-213ENST00000448520 C12orf50Q8NA57 414 aaPredicted RBP14.62□□□□□ -0.07
PDLIM2-213ENST00000448520 TMEM174Q8WUU8 243 aa14.62□□□□□ -0.07
PDLIM2-213ENST00000448520 CD101Q93033 1021 aa14.62□□□□□ -0.07
PDLIM2-213ENST00000448520 CHFRQ96EP1 664 aa14.62□□□□□ -0.07
PDLIM2-213ENST00000448520 CYP2S1Q96SQ9 504 aa14.62□□□□□ -0.07
PDLIM2-213ENST00000448520 MMRN2Q9H8L6 949 aa14.62□□□□□ -0.07
PDLIM2-213ENST00000448520 FBRSL1Q9HCM7 1045 aaKnown RBP14.62□□□□□ -0.07
PDLIM2-213ENST00000448520 TRPC7Q9HCX4 862 aa14.62□□□□□ -0.07
PDLIM2-213ENST00000448520 GCNT4Q9P109 453 aa14.62□□□□□ -0.07
PDLIM2-213ENST00000448520 LRRIQ3A6PVS8 624 aaPredicted RBP14.61□□□□□ -0.07
PDLIM2-213ENST00000448520 GOLGA6L19H0YKK7 550 aa14.61□□□□□ -0.07
PDLIM2-213ENST00000448520 FGFR1OPO95684 399 aaKnown RBP14.61□□□□□ -0.07
PDLIM2-213ENST00000448520 DLATP10515 647 aaKnown RBP14.61□□□□□ -0.07
PDLIM2-213ENST00000448520 GRIK1P39086 918 aa14.61□□□□□ -0.07
PDLIM2-213ENST00000448520 MTIF2P46199 727 aaKnown RBP14.61□□□□□ -0.07
PDLIM2-213ENST00000448520 VAMP7P51809 220 aa14.61□□□□□ -0.07
PDLIM2-213ENST00000448520 PSMD6Q15008 389 aa14.61□□□□□ -0.07
PDLIM2-213ENST00000448520 TCP11X2Q5H9J9 407 aa14.61□□□□□ -0.07
PDLIM2-213ENST00000448520 PPM1JQ5JR12 505 aa14.61□□□□□ -0.07
PDLIM2-213ENST00000448520 IL31Q6EBC2 164 aa14.61□□□□□ -0.07
PDLIM2-213ENST00000448520 WDR49Q8IV35 697 aa14.61□□□□□ -0.07
PDLIM2-213ENST00000448520 ARL14EPQ8N8R7 260 aaPredicted RBP14.61□□□□□ -0.07
PDLIM2-213ENST00000448520 STKLD1Q8NE28 680 aa14.61□□□□□ -0.07
PDLIM2-213ENST00000448520 RIN3Q8TB24 985 aa14.61□□□□□ -0.07
PDLIM2-213ENST00000448520 ZNF516Q92618 1163 aa14.61□□□□□ -0.07
PDLIM2-213ENST00000448520 ACDQ96AP0 544 aa14.61□□□□□ -0.07
PDLIM2-213ENST00000448520 CNTNAP3BQ96NU0 1288 aa14.61□□□□□ -0.07
PDLIM2-213ENST00000448520 SYT15Q9BQS2 421 aa14.61□□□□□ -0.07
PDLIM2-213ENST00000448520 CNTNAP3Q9BZ76 1288 aa14.61□□□□□ -0.07
PDLIM2-213ENST00000448520 ARRDC1-AS1Q9H2J1 176 aa14.61□□□□□ -0.07
PDLIM2-213ENST00000448520 TRPM5Q9NZQ8 1165 aa14.61□□□□□ -0.07
PDLIM2-213ENST00000448520 ARMCX3Q9UH62 379 aaPredicted RBP14.61□□□□□ -0.07
PDLIM2-213ENST00000448520 EBF1Q9UH73 591 aa14.61□□□□□ -0.07
PDLIM2-213ENST00000448520 ARHGAP26Q9UNA1 814 aa14.61□□□□□ -0.07
PDLIM2-213ENST00000448520 GDF9O60383 454 aa14.6□□□□□ -0.07
PDLIM2-213ENST00000448520 ATP2C2O75185 946 aa14.6□□□□□ -0.07
PDLIM2-213ENST00000448520 EPN2O95208 641 aa14.6□□□□□ -0.07
PDLIM2-213ENST00000448520 KRT13P13646 458 aa14.6□□□□□ -0.07
PDLIM2-213ENST00000448520 WARSP23381 471 aaKnown RBP14.6□□□□□ -0.07
PDLIM2-213ENST00000448520 LMO2P25791 158 aa14.6□□□□□ -0.07
PDLIM2-213ENST00000448520 ANXA13P27216 316 aa14.6□□□□□ -0.07
PDLIM2-213ENST00000448520 GNL1P36915 607 aaPredicted RBP14.6□□□□□ -0.07
PDLIM2-213ENST00000448520 PXNP49023 591 aaPredicted RBP14.6□□□□□ -0.07
PDLIM2-213ENST00000448520 PPP3CAQ08209 521 aa14.6□□□□□ -0.07
PDLIM2-213ENST00000448520 USP4Q13107 963 aa14.6□□□□□ -0.07
PDLIM2-213ENST00000448520 KRT31Q15323 416 aa14.6□□□□□ -0.07
PDLIM2-213ENST00000448520 EML3Q32P44 896 aa14.6□□□□□ -0.07
PDLIM2-213ENST00000448520 AASDHQ4L235 1098 aaPredicted RBP14.6□□□□□ -0.07
PDLIM2-213ENST00000448520 TCERG1LQ5VWI1 586 aa14.6□□□□□ -0.07
PDLIM2-213ENST00000448520 DENND5BQ6ZUT9 1274 aa14.6□□□□□ -0.07
PDLIM2-213ENST00000448520 APTXQ7Z2E3 356 aaKnown RBP14.6□□□□□ -0.07
PDLIM2-213ENST00000448520 TRAPPC11Q7Z392 1133 aa14.6□□□□□ -0.07
PDLIM2-213ENST00000448520 KBTBD6Q86V97 674 aa14.6□□□□□ -0.07
PDLIM2-213ENST00000448520 TRIM59Q8IWR1 403 aa14.6□□□□□ -0.07
PDLIM2-213ENST00000448520 OR5B17Q8NGF7 314 aa14.6□□□□□ -0.07
PDLIM2-213ENST00000448520 SH3RF2Q8TEC5 729 aa14.6□□□□□ -0.07
PDLIM2-213ENST00000448520 PARD3BQ8TEW8 1205 aa14.6□□□□□ -0.07
PDLIM2-213ENST00000448520 SLC22A12Q96S37 553 aa14.6□□□□□ -0.07
PDLIM2-213ENST00000448520 MMS19Q96T76 1030 aa14.6□□□□□ -0.07
PDLIM2-213ENST00000448520 ABCA7Q8IZY2 2146 aa14.59□□□□□ -0.07
PDLIM2-213ENST00000448520 TRIM66O15016 1216 aa14.59□□□□□ -0.07
PDLIM2-213ENST00000448520 MAPK13O15264 365 aa14.59□□□□□ -0.07
PDLIM2-213ENST00000448520 AP5Z1O43299 807 aa14.59□□□□□ -0.07
PDLIM2-213ENST00000448520 TACC1O75410 805 aa14.59□□□□□ -0.07
PDLIM2-213ENST00000448520 RHOBTB1O94844 696 aa14.59□□□□□ -0.07
PDLIM2-213ENST00000448520 NFATC1O95644 943 aa14.59□□□□□ -0.07
PDLIM2-213ENST00000448520 APBB3O95704 486 aa14.59□□□□□ -0.07
PDLIM2-213ENST00000448520 PDGFRBP09619 1106 aa14.59□□□□□ -0.07
PDLIM2-213ENST00000448520 CDK11BP21127 795 aaKnown RBP14.59□□□□□ -0.07
PDLIM2-213ENST00000448520 BDNFP23560 247 aa14.59□□□□□ -0.07
PDLIM2-213ENST00000448520 HOXC13P31276 330 aa14.59□□□□□ -0.07
PDLIM2-213ENST00000448520 MARSP56192 900 aaKnown RBP14.59□□□□□ -0.07
PDLIM2-213ENST00000448520 PLA2G2CQ5R387 149 aa14.59□□□□□ -0.07
PDLIM2-213ENST00000448520 FAM114A1Q8IWE2 563 aa14.59□□□□□ -0.07
PDLIM2-213ENST00000448520 RPLP0P6Q8NHW5 317 aa14.59□□□□□ -0.07
PDLIM2-213ENST00000448520 MYCBPAPQ8TBZ2 947 aa14.59□□□□□ -0.07
PDLIM2-213ENST00000448520 TMC2Q8TDI7 906 aa14.59□□□□□ -0.07
PDLIM2-213ENST00000448520 KBTBD7Q8WVZ9 684 aa14.59□□□□□ -0.07
PDLIM2-213ENST00000448520 SLC35C1Q96A29 364 aa14.59□□□□□ -0.07
PDLIM2-213ENST00000448520 MYLPFQ96A32 169 aa14.59□□□□□ -0.07
PDLIM2-213ENST00000448520 ELMO3Q96BJ8 720 aa14.59□□□□□ -0.07
PDLIM2-213ENST00000448520 FNBP1Q96RU3 617 aa14.59□□□□□ -0.07
PDLIM2-213ENST00000448520 CGRRF1Q99675 332 aa14.59□□□□□ -0.07
PDLIM2-213ENST00000448520 VPS16Q9H269 839 aa14.59□□□□□ -0.07
PDLIM2-213ENST00000448520 LINC00597Q9H2U6 94 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms