RNA–Protein interactions for RNA: ENST00000443560.1

NUCB1-205, Transcript of nucleobindin 1, humanhuman

TSL 4

Gene NUCB1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB1-205ENST00000443560 ZNF518BQ9C0D4 1074 aa16.1■□□□□ 0.17
NUCB1-205ENST00000443560 DPEP3Q9H4B8 488 aa16.1■□□□□ 0.17
NUCB1-205ENST00000443560 EVLQ9UI08 416 aaPredicted RBP16.1■□□□□ 0.17
NUCB1-205ENST00000443560 NME7Q9Y5B8 376 aa16.1■□□□□ 0.17
NUCB1-205ENST00000443560 C1QTNF9BB2RNN3 333 aa16.09■□□□□ 0.17
NUCB1-205ENST00000443560 CDX4O14627 284 aaPredicted RBP16.09■□□□□ 0.17
NUCB1-205ENST00000443560 CLIC2O15247 247 aa16.09■□□□□ 0.17
NUCB1-205ENST00000443560 CLSTN1O94985 981 aa16.09■□□□□ 0.17
NUCB1-205ENST00000443560 RTN3O95197 1032 aaPredicted RBP16.09■□□□□ 0.17
NUCB1-205ENST00000443560 CST3P01034 146 aaPredicted RBP16.09■□□□□ 0.17
NUCB1-205ENST00000443560 C1QTNF9P0C862 333 aa16.09■□□□□ 0.17
NUCB1-205ENST00000443560 P2RY2P41231 377 aa16.09■□□□□ 0.17
NUCB1-205ENST00000443560 AMPD3Q01432 767 aa16.09■□□□□ 0.17
NUCB1-205ENST00000443560 CYP24A1Q07973 514 aa16.09■□□□□ 0.17
NUCB1-205ENST00000443560 MESP2Q0VG99 397 aa16.09■□□□□ 0.17
NUCB1-205ENST00000443560 LMAN2Q12907 356 aa16.09■□□□□ 0.17
NUCB1-205ENST00000443560 PSMD6Q15008 389 aa16.09■□□□□ 0.17
NUCB1-205ENST00000443560 TRIM61Q5EBN2 209 aa16.09■□□□□ 0.17
NUCB1-205ENST00000443560 FAM26FQ5R3K3 315 aa16.09■□□□□ 0.17
NUCB1-205ENST00000443560 PGBD3Q8N328 593 aa16.09■□□□□ 0.17
NUCB1-205ENST00000443560 B3GALNT2Q8NCR0 500 aa16.09■□□□□ 0.17
NUCB1-205ENST00000443560 HMGB4Q8WW32 186 aa16.09■□□□□ 0.17
NUCB1-205ENST00000443560 TRIM9Q9C026 710 aa16.09■□□□□ 0.17
NUCB1-205ENST00000443560 CUEDC2Q9H467 287 aa16.09■□□□□ 0.17
NUCB1-205ENST00000443560 ZDHHC4Q9NPG8 344 aa16.09■□□□□ 0.17
NUCB1-205ENST00000443560 AGPAT3Q9NRZ7 376 aa16.09■□□□□ 0.17
NUCB1-205ENST00000443560 TMEM30AQ9NV96 361 aa16.09■□□□□ 0.17
NUCB1-205ENST00000443560 NXF1Q9UBU9 619 aaKnown RBP16.09■□□□□ 0.17
NUCB1-205ENST00000443560 ATP8B3O60423 1300 aa16.09■□□□□ 0.17
NUCB1-205ENST00000443560 ASPMQ8IZT6 3477 aa16.09■□□□□ 0.17
NUCB1-205ENST00000443560 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.08■□□□□ 0.16
NUCB1-205ENST00000443560 TCRBV21S2A2A0A5A6 115 aa16.08■□□□□ 0.16
NUCB1-205ENST00000443560 E2F8A0AVK6 867 aa16.08■□□□□ 0.16
NUCB1-205ENST00000443560 CLDN5O00501 218 aa16.08■□□□□ 0.16
NUCB1-205ENST00000443560 TNFRSF10BO14763 440 aa16.08■□□□□ 0.16
NUCB1-205ENST00000443560 DPP6P42658 865 aa16.08■□□□□ 0.16
NUCB1-205ENST00000443560 TNFRSF4P43489 277 aa16.08■□□□□ 0.16
NUCB1-205ENST00000443560 NASPP49321 788 aaPredicted RBP16.08■□□□□ 0.16
NUCB1-205ENST00000443560 GAD2Q05329 585 aa16.08■□□□□ 0.16
NUCB1-205ENST00000443560 LY6G5CQ5SRR4 150 aa16.08■□□□□ 0.16
NUCB1-205ENST00000443560 HECTD3Q5T447 861 aa16.08■□□□□ 0.16
NUCB1-205ENST00000443560 EMC10Q5UCC4 262 aa16.08■□□□□ 0.16
NUCB1-205ENST00000443560 BTBD8Q5XKL5 378 aa16.08■□□□□ 0.16
NUCB1-205ENST00000443560 SYT12Q8IV01 421 aa16.08■□□□□ 0.16
NUCB1-205ENST00000443560 TMEFF1Q8IYR6 380 aa16.08■□□□□ 0.16
NUCB1-205ENST00000443560 XXYLT1Q8NBI6 393 aa16.08■□□□□ 0.16
NUCB1-205ENST00000443560 DEFB124Q8NES8 71 aa16.08■□□□□ 0.16
NUCB1-205ENST00000443560 ZNF507Q8TCN5 953 aa16.08■□□□□ 0.16
NUCB1-205ENST00000443560 OVCA2Q8WZ82 227 aa16.08■□□□□ 0.16
NUCB1-205ENST00000443560 OTUB2Q96DC9 234 aa16.08■□□□□ 0.16
NUCB1-205ENST00000443560 B3GNT5Q9BYG0 378 aa16.08■□□□□ 0.16
NUCB1-205ENST00000443560 ZSCAN16Q9H4T2 348 aaPredicted RBP16.08■□□□□ 0.16
NUCB1-205ENST00000443560 KBTBD4Q9NVX7 518 aa16.08■□□□□ 0.16
NUCB1-205ENST00000443560 SH3BP1Q9Y3L3 701 aa16.08■□□□□ 0.16
NUCB1-205ENST00000443560 UBE4BO95155 1302 aa16.08■□□□□ 0.16
NUCB1-205ENST00000443560 A0A0A0MRY4 1105 aa16.07■□□□□ 0.16
NUCB1-205ENST00000443560 TBC1D3BA6NDS4 549 aa16.07■□□□□ 0.16
NUCB1-205ENST00000443560 TGFB1I1O43294 461 aa16.07■□□□□ 0.16
NUCB1-205ENST00000443560 COCHO43405 550 aa16.07■□□□□ 0.16
NUCB1-205ENST00000443560 PHACTR2O75167 634 aa16.07■□□□□ 0.16
NUCB1-205ENST00000443560 STAU1O95793 577 aaKnown RBP16.07■□□□□ 0.16
NUCB1-205ENST00000443560 PTGER3P43115 390 aa16.07■□□□□ 0.16
NUCB1-205ENST00000443560 KIR2DL1P43626 348 aaPredicted RBP16.07■□□□□ 0.16
NUCB1-205ENST00000443560 MAPK8P45983 427 aa16.07■□□□□ 0.16
NUCB1-205ENST00000443560 MYL6P60660 151 aa16.07■□□□□ 0.16
NUCB1-205ENST00000443560 SNRPFP62306 86 aaKnown RBP16.07■□□□□ 0.16
NUCB1-205ENST00000443560 PREPLQ4J6C6 727 aaPredicted RBP16.07■□□□□ 0.16
NUCB1-205ENST00000443560 LYSMD4Q5XG99 296 aa16.07■□□□□ 0.16
NUCB1-205ENST00000443560 NUDT18Q6ZVK8 323 aa16.07■□□□□ 0.16
NUCB1-205ENST00000443560 EPM2AIP1Q7L775 607 aaPredicted RBP16.07■□□□□ 0.16
NUCB1-205ENST00000443560 TRMT11Q7Z4G4 463 aaKnown RBP16.07■□□□□ 0.16
NUCB1-205ENST00000443560 NELFCDQ8IXH7 590 aa16.07■□□□□ 0.16
NUCB1-205ENST00000443560 SYAP1Q96A49 352 aaPredicted RBP16.07■□□□□ 0.16
NUCB1-205ENST00000443560 DHX58Q96C10 678 aa16.07■□□□□ 0.16
NUCB1-205ENST00000443560 MED10Q9BTT4 135 aa16.07■□□□□ 0.16
NUCB1-205ENST00000443560 ADAM33Q9BZ11 813 aa16.07■□□□□ 0.16
NUCB1-205ENST00000443560 MTMR6Q9Y217 621 aa16.07■□□□□ 0.16
NUCB1-205ENST00000443560 ATXN2Q99700 1313 aaKnown RBP16.06■□□□□ 0.16
NUCB1-205ENST00000443560 SPTLC2O15270 562 aa16.06■□□□□ 0.16
NUCB1-205ENST00000443560 ADAM23O75077 832 aa16.06■□□□□ 0.16
NUCB1-205ENST00000443560 CHRM1P11229 460 aaPredicted RBP16.06■□□□□ 0.16
NUCB1-205ENST00000443560 SPINK2P20155 84 aa16.06■□□□□ 0.16
NUCB1-205ENST00000443560 ATICP31939 592 aa16.06■□□□□ 0.16
NUCB1-205ENST00000443560 E2F4Q16254 413 aa16.06■□□□□ 0.16
NUCB1-205ENST00000443560 MAP7D1Q3KQU3 841 aa16.06■□□□□ 0.16
NUCB1-205ENST00000443560 SPDYCQ5MJ68 293 aa16.06■□□□□ 0.16
NUCB1-205ENST00000443560 FRMD1Q8N878 549 aa16.06■□□□□ 0.16
NUCB1-205ENST00000443560 ZNF513Q8N8E2 541 aaPredicted RBP16.06■□□□□ 0.16
NUCB1-205ENST00000443560 NAT16Q8N8M0 369 aa16.06■□□□□ 0.16
NUCB1-205ENST00000443560 IQUBQ8NA54 791 aa16.06■□□□□ 0.16
NUCB1-205ENST00000443560 KCNK16Q96T55 309 aa16.06■□□□□ 0.16
NUCB1-205ENST00000443560 NACA2Q9H009 215 aa16.06■□□□□ 0.16
NUCB1-205ENST00000443560 SLC32A1Q9H598 525 aa16.06■□□□□ 0.16
NUCB1-205ENST00000443560 DMAP1Q9NPF5 467 aaPredicted RBP16.06■□□□□ 0.16
NUCB1-205ENST00000443560 DEC1Q9P2X7 70 aa16.06■□□□□ 0.16
NUCB1-205ENST00000443560 CHORDC1Q9UHD1 332 aaPredicted RBP16.06■□□□□ 0.16
NUCB1-205ENST00000443560 MBD1Q9UIS9 605 aaPredicted RBP16.06■□□□□ 0.16
NUCB1-205ENST00000443560 RALYQ9UKM9 306 aaKnown RBP16.06■□□□□ 0.16
NUCB1-205ENST00000443560 ZMIZ1Q9ULJ6 1067 aa16.06■□□□□ 0.16
NUCB1-205ENST00000443560 CFIP05156 583 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms