RNA–Protein interactions for RNA: ENST00000435050.1

CLDN4-203, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-203ENST00000435050 ST3GAL5Q9UNP4 418 aa12.69□□□□□ -0.38
CLDN4-203ENST00000435050 NAALADL1Q9UQQ1 740 aa12.69□□□□□ -0.38
CLDN4-203ENST00000435050 KAT6AQ92794 2004 aa12.69□□□□□ -0.38
CLDN4-203ENST00000435050 MT-ND3P03897 115 aa12.69□□□□□ -0.38
CLDN4-203ENST00000435050 THP07101 528 aa12.69□□□□□ -0.38
CLDN4-203ENST00000435050 FCGRTP55899 365 aa12.69□□□□□ -0.38
CLDN4-203ENST00000435050 SESN2P58004 480 aaPredicted RBP12.69□□□□□ -0.38
CLDN4-203ENST00000435050 SLC6A3Q01959 620 aa12.69□□□□□ -0.38
CLDN4-203ENST00000435050 DEUP1Q05D60 604 aa12.69□□□□□ -0.38
CLDN4-203ENST00000435050 ENPEPQ07075 957 aa12.69□□□□□ -0.38
CLDN4-203ENST00000435050 BST2Q10589 180 aaKnown RBP12.69□□□□□ -0.38
CLDN4-203ENST00000435050 STAT4Q14765 748 aa12.69□□□□□ -0.38
CLDN4-203ENST00000435050 TTC31Q49AM3 519 aaPredicted RBP12.69□□□□□ -0.38
CLDN4-203ENST00000435050 ANKS1BQ7Z6G8 1248 aa12.69□□□□□ -0.38
CLDN4-203ENST00000435050 ATP11CQ8NB49 1132 aa12.69□□□□□ -0.38
CLDN4-203ENST00000435050 FBXO36Q8NEA4 188 aa12.69□□□□□ -0.38
CLDN4-203ENST00000435050 TMEM40Q8WWA1 233 aa12.69□□□□□ -0.38
CLDN4-203ENST00000435050 LHX5Q9H2C1 402 aa12.69□□□□□ -0.38
CLDN4-203ENST00000435050 TRABDQ9H4I3 376 aa12.69□□□□□ -0.38
CLDN4-203ENST00000435050 STAP1Q9ULZ2 295 aa12.69□□□□□ -0.38
CLDN4-203ENST00000435050 COL1A2P08123 1366 aa12.69□□□□□ -0.38
CLDN4-203ENST00000435050 ADCY6O43306 1168 aa12.69□□□□□ -0.38
CLDN4-203ENST00000435050 TRUB2O95900 331 aaKnown RBP12.69□□□□□ -0.38
CLDN4-203ENST00000435050 FAM200BP0CF97 657 aa12.69□□□□□ -0.38
CLDN4-203ENST00000435050 NCAM1P13591 858 aa12.69□□□□□ -0.38
CLDN4-203ENST00000435050 CREB1P16220 341 aa12.69□□□□□ -0.38
CLDN4-203ENST00000435050 SAT1P21673 171 aa12.69□□□□□ -0.38
CLDN4-203ENST00000435050 AMPD1P23109 780 aa12.69□□□□□ -0.38
CLDN4-203ENST00000435050 ZNF132P52740 706 aa12.69□□□□□ -0.38
CLDN4-203ENST00000435050 IL9RQ01113 521 aa12.69□□□□□ -0.38
CLDN4-203ENST00000435050 CRHR2Q13324 411 aa12.69□□□□□ -0.38
CLDN4-203ENST00000435050 AUHQ13825 339 aaKnown RBP12.69□□□□□ -0.38
CLDN4-203ENST00000435050 LRRC34Q8IZ02 419 aa12.69□□□□□ -0.38
CLDN4-203ENST00000435050 ABI1Q8IZP0 508 aa12.69□□□□□ -0.38
CLDN4-203ENST00000435050 DEFB106AQ8N104 65 aa12.69□□□□□ -0.38
CLDN4-203ENST00000435050 DNAAF3Q8N9W5 541 aa12.69□□□□□ -0.38
CLDN4-203ENST00000435050 LRRC8CQ8TDW0 803 aa12.69□□□□□ -0.38
CLDN4-203ENST00000435050 XPNPEP3Q9NQH7 507 aa12.69□□□□□ -0.38
CLDN4-203ENST00000435050 FGFR1OP2Q9NVK5 253 aa12.69□□□□□ -0.38
CLDN4-203ENST00000435050 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.69□□□□□ -0.38
CLDN4-203ENST00000435050 FLRT1Q9NZU1 646 aa12.69□□□□□ -0.38
CLDN4-203ENST00000435050 AP4E1Q9UPM8 1137 aa12.69□□□□□ -0.38
CLDN4-203ENST00000435050 SMIM35A0A1B0GVV1 85 aa12.68□□□□□ -0.38
CLDN4-203ENST00000435050 SRGAP2BP0DMP2 458 aa12.68□□□□□ -0.38
CLDN4-203ENST00000435050 PROZP22891 400 aa12.68□□□□□ -0.38
CLDN4-203ENST00000435050 ZNF143P52747 638 aaPredicted RBP12.68□□□□□ -0.38
CLDN4-203ENST00000435050 COPS2P61201 443 aa12.68□□□□□ -0.38
CLDN4-203ENST00000435050 SKOR1P84550 965 aa12.68□□□□□ -0.38
CLDN4-203ENST00000435050 PCGF5Q86SE9 256 aa12.68□□□□□ -0.38
CLDN4-203ENST00000435050 PIGZQ86VD9 579 aa12.68□□□□□ -0.38
CLDN4-203ENST00000435050 PPIL6Q8IXY8 311 aa12.68□□□□□ -0.38
CLDN4-203ENST00000435050 SNRNP25Q9BV90 132 aaKnown RBP12.68□□□□□ -0.38
CLDN4-203ENST00000435050 ZNF252P-AS1Q0IIN9 211 aa12.68□□□□□ -0.38
CLDN4-203ENST00000435050 TGS1Q96RS0 853 aaKnown RBP12.68□□□□□ -0.38
CLDN4-203ENST00000435050 APBA2Q99767 749 aa12.68□□□□□ -0.38
CLDN4-203ENST00000435050 KLHL8Q9P2G9 620 aaPredicted RBP12.68□□□□□ -0.38
CLDN4-203ENST00000435050 NR2E3Q9Y5X4 410 aa12.68□□□□□ -0.38
CLDN4-203ENST00000435050 ABLIM1O14639 778 aa12.68□□□□□ -0.38
CLDN4-203ENST00000435050 FAM107AO95990 144 aa12.68□□□□□ -0.38
CLDN4-203ENST00000435050 RBL1P28749 1068 aa12.68□□□□□ -0.38
CLDN4-203ENST00000435050 RPL22P35268 128 aaKnown RBP12.68□□□□□ -0.38
CLDN4-203ENST00000435050 PNPLA4P41247 253 aa12.68□□□□□ -0.38
CLDN4-203ENST00000435050 GDF10P55107 478 aa12.68□□□□□ -0.38
CLDN4-203ENST00000435050 PTP4A2Q12974 167 aa12.68□□□□□ -0.38
CLDN4-203ENST00000435050 SIX1Q15475 284 aaPredicted RBP12.68□□□□□ -0.38
CLDN4-203ENST00000435050 CYP1B1Q16678 543 aa12.68□□□□□ -0.38
CLDN4-203ENST00000435050 CHADLQ6NUI6 762 aa12.68□□□□□ -0.38
CLDN4-203ENST00000435050 TTC30AQ86WT1 665 aa12.68□□□□□ -0.38
CLDN4-203ENST00000435050 VPS52Q8N1B4 723 aa12.68□□□□□ -0.38
CLDN4-203ENST00000435050 TMEM174Q8WUU8 243 aa12.68□□□□□ -0.38
CLDN4-203ENST00000435050 SNX27Q96L92 541 aa12.68□□□□□ -0.38
CLDN4-203ENST00000435050 SENP8Q96LD8 212 aa12.68□□□□□ -0.38
CLDN4-203ENST00000435050 TTC25Q96NG3 672 aa12.68□□□□□ -0.38
CLDN4-203ENST00000435050 MTG1Q9BT17 334 aaPredicted RBP12.68□□□□□ -0.38
CLDN4-203ENST00000435050 PCDH9Q9HC56 1237 aa12.68□□□□□ -0.38
CLDN4-203ENST00000435050 COL11A1P12107 1806 aaPredicted RBP12.68□□□□□ -0.38
CLDN4-203ENST00000435050 CYP2F1P24903 491 aa12.67□□□□□ -0.38
CLDN4-203ENST00000435050 CD52P31358 61 aa12.67□□□□□ -0.38
CLDN4-203ENST00000435050 TKTL1P51854 596 aa12.67□□□□□ -0.38
CLDN4-203ENST00000435050 LCLAT1Q6UWP7 414 aa12.67□□□□□ -0.38
CLDN4-203ENST00000435050 VSIG1Q86XK7 387 aa12.67□□□□□ -0.38
CLDN4-203ENST00000435050 ALLCQ8N6M5 410 aa12.67□□□□□ -0.38
CLDN4-203ENST00000435050 TTC17Q96AE7 1141 aa12.67□□□□□ -0.38
CLDN4-203ENST00000435050 TSPYL2Q9H2G4 693 aaPredicted RBP12.67□□□□□ -0.38
CLDN4-203ENST00000435050 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.67□□□□□ -0.381e-6■■■□□ 14.9
CLDN4-203ENST00000435050 LOC102724159A0A0B4J2E5 919 aa12.67□□□□□ -0.38
CLDN4-203ENST00000435050 SREBF2Q12772 1141 aa12.67□□□□□ -0.38
CLDN4-203ENST00000435050 PWP2Q15269 919 aaKnown RBP12.67□□□□□ -0.38
CLDN4-203ENST00000435050 SOWAHAQ2M3V2 549 aa12.67□□□□□ -0.38
CLDN4-203ENST00000435050 EFHC2Q5JST6 749 aa12.67□□□□□ -0.38
CLDN4-203ENST00000435050 LRRC38Q5VT99 294 aa12.67□□□□□ -0.38
CLDN4-203ENST00000435050 PID1Q7Z2X4 250 aa12.67□□□□□ -0.38
CLDN4-203ENST00000435050 RAET1EQ8TD07 263 aa12.67□□□□□ -0.38
CLDN4-203ENST00000435050 PPM1EQ8WY54 764 aa12.67□□□□□ -0.38
CLDN4-203ENST00000435050 SEC16BQ96JE7 1060 aa12.67□□□□□ -0.38
CLDN4-203ENST00000435050 BCO2Q9BYV7 579 aa12.67□□□□□ -0.38
CLDN4-203ENST00000435050 PLEKHA5Q9HAU0 1116 aa12.67□□□□□ -0.38
CLDN4-203ENST00000435050 DDIT4Q9NX09 232 aa12.67□□□□□ -0.38
CLDN4-203ENST00000435050 NUDT5Q9UKK9 219 aa12.67□□□□□ -0.38
CLDN4-203ENST00000435050 NDC80O14777 642 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms