RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 IQANK1A0A1B0GTG1 560 aa12.31□□□□□ -0.44
CD44-209ENST00000433892 SMAPO00193 183 aa12.31□□□□□ -0.44
CD44-209ENST00000433892 INHBAP08476 426 aa12.31□□□□□ -0.44
CD44-209ENST00000433892 PYGBP11216 843 aa12.31□□□□□ -0.44
CD44-209ENST00000433892 GM2AP17900 193 aa12.31□□□□□ -0.44
CD44-209ENST00000433892 CYP3A5P20815 502 aa12.31□□□□□ -0.44
CD44-209ENST00000433892 GPD1P21695 349 aa12.31□□□□□ -0.44
CD44-209ENST00000433892 NDST1P52848 882 aa12.31□□□□□ -0.44
CD44-209ENST00000433892 KCNJ11Q14654 390 aa12.31□□□□□ -0.44
CD44-209ENST00000433892 SCYL2Q6P3W7 929 aa12.31□□□□□ -0.44
CD44-209ENST00000433892 PRPF39Q86UA1 669 aaKnown RBP12.31□□□□□ -0.44
CD44-209ENST00000433892 C12orf29Q8N999 325 aa12.31□□□□□ -0.44
CD44-209ENST00000433892 KCNV2Q8TDN2 545 aa12.31□□□□□ -0.44
CD44-209ENST00000433892 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.31□□□□□ -0.44
CD44-209ENST00000433892 LRRN4Q8WUT4 740 aa12.31□□□□□ -0.44
CD44-209ENST00000433892 HPDLQ96IR7 371 aa12.31□□□□□ -0.44
CD44-209ENST00000433892 ZNF570Q96NI8 536 aa12.31□□□□□ -0.44
CD44-209ENST00000433892 FAM111AQ96PZ2 611 aa12.31□□□□□ -0.44
CD44-209ENST00000433892 HEY1Q9Y5J3 304 aa12.31□□□□□ -0.44
CD44-209ENST00000433892 EVPLQ92817 2033 aa12.31□□□□□ -0.44
CD44-209ENST00000433892 C2CD4BA6NLJ0 364 aa12.31□□□□□ -0.44
CD44-209ENST00000433892 KCNN4O15554 427 aa12.31□□□□□ -0.44
CD44-209ENST00000433892 PRPSAP2O60256 369 aa12.31□□□□□ -0.44
CD44-209ENST00000433892 FAM155BO75949 473 aa12.31□□□□□ -0.44
CD44-209ENST00000433892 ENDOD1O94919 500 aa12.31□□□□□ -0.44
CD44-209ENST00000433892 VDRP11473 427 aa12.31□□□□□ -0.44
CD44-209ENST00000433892 BAG6P46379 1132 aa12.31□□□□□ -0.44
CD44-209ENST00000433892 RGS7P49802 495 aa12.31□□□□□ -0.44
CD44-209ENST00000433892 RASSF2P50749 326 aa12.31□□□□□ -0.44
CD44-209ENST00000433892 NAA25Q14CX7 972 aa12.31□□□□□ -0.44
CD44-209ENST00000433892 CTC1Q2NKJ3 1217 aa12.31□□□□□ -0.44
CD44-209ENST00000433892 FAXCQ5TGI0 409 aa12.31□□□□□ -0.44
CD44-209ENST00000433892 POTEAQ6S8J7 498 aa12.31□□□□□ -0.44
CD44-209ENST00000433892 FAM183BPQ6ZVS7 135 aa12.31□□□□□ -0.44
CD44-209ENST00000433892 SLC44A1Q8WWI5 657 aa12.31□□□□□ -0.44
CD44-209ENST00000433892 TTC17Q96AE7 1141 aa12.31□□□□□ -0.44
CD44-209ENST00000433892 CFAP36Q96G28 342 aa12.31□□□□□ -0.44
CD44-209ENST00000433892 TSSK1BQ9BXA7 367 aa12.31□□□□□ -0.44
CD44-209ENST00000433892 SMARCAD1Q9H4L7 1026 aa12.31□□□□□ -0.44
CD44-209ENST00000433892 PDGFCQ9NRA1 345 aa12.31□□□□□ -0.44
CD44-209ENST00000433892 GPATCH2LQ9NWQ4 482 aa12.31□□□□□ -0.44
CD44-209ENST00000433892 A0A087WZ62 844 aa12.3□□□□□ -0.44
CD44-209ENST00000433892 IRF6O14896 467 aa12.3□□□□□ -0.44
CD44-209ENST00000433892 HBP1O60381 514 aa12.3□□□□□ -0.44
CD44-209ENST00000433892 CNMDO75829 334 aa12.3□□□□□ -0.44
CD44-209ENST00000433892 WFS1O76024 890 aa12.3□□□□□ -0.44
CD44-209ENST00000433892 TXNP10599 105 aaKnown RBP12.3□□□□□ -0.44
CD44-209ENST00000433892 NEFHP12036 1026 aa12.3□□□□□ -0.44
CD44-209ENST00000433892 TSHRP16473 764 aa12.3□□□□□ -0.44
CD44-209ENST00000433892 TFDP2Q14188 446 aa12.3□□□□□ -0.44
CD44-209ENST00000433892 KRT81Q14533 505 aa12.3□□□□□ -0.44
CD44-209ENST00000433892 SLC10A6Q3KNW5 377 aa12.3□□□□□ -0.44
CD44-209ENST00000433892 ANKRD20A2Q5SQ80 823 aa12.3□□□□□ -0.44
CD44-209ENST00000433892 ANKRD20A1Q5TYW2 823 aa12.3□□□□□ -0.44
CD44-209ENST00000433892 WDR78Q5VTH9 848 aa12.3□□□□□ -0.44
CD44-209ENST00000433892 ANKRD20A3Q5VUR7 823 aa12.3□□□□□ -0.44
CD44-209ENST00000433892 PLD5Q8N7P1 536 aa12.3□□□□□ -0.44
CD44-209ENST00000433892 RNF157Q96PX1 679 aa12.3□□□□□ -0.44
CD44-209ENST00000433892 FDXACB1Q9BRP7 624 aaPredicted RBP12.3□□□□□ -0.44
CD44-209ENST00000433892 TRIM55Q9BYV6 548 aa12.3□□□□□ -0.44
CD44-209ENST00000433892 CYP3A43Q9HB55 503 aa12.3□□□□□ -0.44
CD44-209ENST00000433892 USP29Q9HBJ7 922 aa12.3□□□□□ -0.44
CD44-209ENST00000433892 TXNRD2Q9NNW7 524 aa12.3□□□□□ -0.44
CD44-209ENST00000433892 PRMT7Q9NVM4 692 aaPredicted RBP12.3□□□□□ -0.44
CD44-209ENST00000433892 HEY2Q9UBP5 337 aa12.3□□□□□ -0.44
CD44-209ENST00000433892 TSPAN16Q9UKR8 245 aa12.3□□□□□ -0.44
CD44-209ENST00000433892 PPP2R3BQ9Y5P8 575 aa12.3□□□□□ -0.44
CD44-209ENST00000433892 POLR2AP24928 1970 aaKnown RBP12.3□□□□□ -0.44
CD44-209ENST00000433892 ECM2O94769 699 aaPredicted RBP12.3□□□□□ -0.44
CD44-209ENST00000433892 P4HA1P13674 534 aa12.3□□□□□ -0.44
CD44-209ENST00000433892 BGNP21810 368 aa12.3□□□□□ -0.44
CD44-209ENST00000433892 IL4RP24394 825 aa12.3□□□□□ -0.44
CD44-209ENST00000433892 ETV4P43268 484 aa12.3□□□□□ -0.44
CD44-209ENST00000433892 AMHR2Q16671 573 aa12.3□□□□□ -0.44
CD44-209ENST00000433892 Q3C1V9 767 aa12.3□□□□□ -0.44
CD44-209ENST00000433892 FAM47CQ5HY64 1035 aa12.3□□□□□ -0.44
CD44-209ENST00000433892 CCDC62Q6P9F0 684 aa12.3□□□□□ -0.44
CD44-209ENST00000433892 SH2D5Q6ZV89 423 aa12.3□□□□□ -0.44
CD44-209ENST00000433892 ILDR2Q71H61 639 aa12.3□□□□□ -0.44
CD44-209ENST00000433892 CTAGE3PQ8IX95 158 aa12.3□□□□□ -0.44
CD44-209ENST00000433892 ZNF398Q8TD17 642 aa12.3□□□□□ -0.44
CD44-209ENST00000433892 OTUD5Q96G74 571 aa12.3□□□□□ -0.44
CD44-209ENST00000433892 APOPT1Q96IL0 206 aa12.3□□□□□ -0.44
CD44-209ENST00000433892 PDZD7Q9H5P4 517 aa12.3□□□□□ -0.44
CD44-209ENST00000433892 RNPEPL1Q9HAU8 725 aa12.3□□□□□ -0.44
CD44-209ENST00000433892 NGRNQ9NPE2 291 aaKnown RBP12.3□□□□□ -0.44
CD44-209ENST00000433892 BARX2Q9UMQ3 279 aaPredicted RBP12.3□□□□□ -0.44
CD44-209ENST00000433892 CSADQ9Y600 493 aa12.3□□□□□ -0.44
CD44-209ENST00000433892 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.29□□□□□ -0.44
CD44-209ENST00000433892 CFAP69A5D8W1 941 aa12.29□□□□□ -0.44
CD44-209ENST00000433892 C2orf71A6NGG8 1288 aa12.29□□□□□ -0.44
CD44-209ENST00000433892 TRAFD1O14545 582 aaPredicted RBP12.29□□□□□ -0.44
CD44-209ENST00000433892 CHADO15335 359 aa12.29□□□□□ -0.44
CD44-209ENST00000433892 PEX11AO75192 247 aa12.29□□□□□ -0.44
CD44-209ENST00000433892 C22orf31O95567 290 aa12.29□□□□□ -0.44
CD44-209ENST00000433892 APRTP07741 180 aa12.29□□□□□ -0.44
CD44-209ENST00000433892 DHRS4L1P0CG22 281 aa12.29□□□□□ -0.44
CD44-209ENST00000433892 RBL1P28749 1068 aa12.29□□□□□ -0.44
CD44-209ENST00000433892 PTPN4P29074 926 aa12.29□□□□□ -0.44
CD44-209ENST00000433892 CDC25CP30307 473 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms