RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 CDC42EP4Q9H3Q1 356 aaKnown RBP20.47■□□□□ 0.87
VRK2-205ENST00000432057 RSAD1Q9HA92 442 aa20.47■□□□□ 0.87
VRK2-205ENST00000432057 CYLDQ9NQC7 956 aa20.47■□□□□ 0.87
VRK2-205ENST00000432057 DDX43Q9NXZ2 648 aaKnown RBP20.47■□□□□ 0.87
VRK2-205ENST00000432057 XPO1O14980 1071 aaKnown RBP20.46■□□□□ 0.87
VRK2-205ENST00000432057 ENDOD1O94919 500 aa20.46■□□□□ 0.87
VRK2-205ENST00000432057 PECAM1P16284 738 aaPredicted RBP20.46■□□□□ 0.87
VRK2-205ENST00000432057 NR1D1P20393 614 aa20.46■□□□□ 0.87
VRK2-205ENST00000432057 ACADSBP45954 432 aa20.46■□□□□ 0.87
VRK2-205ENST00000432057 RAB27AP51159 221 aa20.46■□□□□ 0.87
VRK2-205ENST00000432057 ARSEP51690 589 aa20.46■□□□□ 0.87
VRK2-205ENST00000432057 DPYSL3Q14195 570 aa20.46■□□□□ 0.87
VRK2-205ENST00000432057 PAQR9Q6ZVX9 377 aa20.46■□□□□ 0.87
VRK2-205ENST00000432057 BBOF1Q8ND07 529 aa20.46■□□□□ 0.87
VRK2-205ENST00000432057 RAET1EQ8TD07 263 aa20.46■□□□□ 0.87
VRK2-205ENST00000432057 C10orf88Q9H8K7 445 aa20.46■□□□□ 0.87
VRK2-205ENST00000432057 BCCIPQ9P287 314 aaKnown RBP eCLIP20.46■□□□□ 0.87
VRK2-205ENST00000432057 TIMM13Q9Y5L4 95 aaPredicted RBP20.46■□□□□ 0.87
VRK2-205ENST00000432057 SGK1O00141 431 aa20.45■□□□□ 0.86
VRK2-205ENST00000432057 ZNF623O75123 536 aa20.45■□□□□ 0.86
VRK2-205ENST00000432057 HOXD10P28358 340 aa20.45■□□□□ 0.86
VRK2-205ENST00000432057 ATP1A2P50993 1020 aa20.45■□□□□ 0.86
VRK2-205ENST00000432057 ZC3H12AQ5D1E8 599 aaKnown RBP20.45■□□□□ 0.86
VRK2-205ENST00000432057 AGBL2Q5U5Z8 902 aa20.45■□□□□ 0.86
VRK2-205ENST00000432057 DSTYKQ6XUX3 929 aa20.45■□□□□ 0.86
VRK2-205ENST00000432057 KDM7AQ6ZMT4 941 aa20.45■□□□□ 0.86
VRK2-205ENST00000432057 PIGZQ86VD9 579 aa20.45■□□□□ 0.86
VRK2-205ENST00000432057 TTC13Q8NBP0 860 aa20.45■□□□□ 0.86
VRK2-205ENST00000432057 HSFY1Q96LI6 401 aa20.45■□□□□ 0.86
VRK2-205ENST00000432057 ADAM2Q99965 735 aa20.45■□□□□ 0.86
VRK2-205ENST00000432057 MED10Q9BTT4 135 aa20.45■□□□□ 0.86
VRK2-205ENST00000432057 DDX23Q9BUQ8 820 aaKnown RBP20.45■□□□□ 0.86
VRK2-205ENST00000432057 CFHR5Q9BXR6 569 aa20.45■□□□□ 0.86
VRK2-205ENST00000432057 DUSP16Q9BY84 665 aa20.45■□□□□ 0.86
VRK2-205ENST00000432057 ADAM33Q9BZ11 813 aa20.45■□□□□ 0.86
VRK2-205ENST00000432057 CRTAC1Q9NQ79 661 aa20.45■□□□□ 0.86
VRK2-205ENST00000432057 PTPRDP23468 1912 aa20.45■□□□□ 0.86
VRK2-205ENST00000432057 APOC4-APOC2K7ER74 178 aa20.45■□□□□ 0.86
VRK2-205ENST00000432057 DNALI1O14645 258 aaPredicted RBP20.45■□□□□ 0.86
VRK2-205ENST00000432057 CABYRO75952 493 aa20.45■□□□□ 0.86
VRK2-205ENST00000432057 BEST1O76090 585 aa20.45■□□□□ 0.86
VRK2-205ENST00000432057 POMCP01189 267 aa20.45■□□□□ 0.86
VRK2-205ENST00000432057 APOC2P02655 101 aa20.45■□□□□ 0.86
VRK2-205ENST00000432057 SCNN1AP37088 669 aa20.45■□□□□ 0.86
VRK2-205ENST00000432057 PTPN9P43378 593 aa20.45■□□□□ 0.86
VRK2-205ENST00000432057 HDAC4P56524 1084 aa20.45■□□□□ 0.86
VRK2-205ENST00000432057 SKOR1P84550 965 aa20.45■□□□□ 0.86
VRK2-205ENST00000432057 ADIGQ0VDE8 80 aa20.45■□□□□ 0.86
VRK2-205ENST00000432057 GPS1Q13098 491 aa20.45■□□□□ 0.86
VRK2-205ENST00000432057 KRT81Q14533 505 aa20.45■□□□□ 0.86
VRK2-205ENST00000432057 SKIDA1Q1XH10 827 aa20.45■□□□□ 0.86
VRK2-205ENST00000432057 FAM26DQ5JW98 314 aa20.45■□□□□ 0.86
VRK2-205ENST00000432057 HIBCHQ6NVY1 386 aaPredicted RBP20.45■□□□□ 0.86
VRK2-205ENST00000432057 CCHCR1Q8TD31 782 aa20.45■□□□□ 0.86
VRK2-205ENST00000432057 SYT15Q9BQS2 421 aa20.45■□□□□ 0.86
VRK2-205ENST00000432057 SNRNP25Q9BV90 132 aaKnown RBP20.45■□□□□ 0.86
VRK2-205ENST00000432057 FRMD8P1Q9BZ68 369 aaPredicted RBP20.45■□□□□ 0.86
VRK2-205ENST00000432057 ADAM7Q9H2U9 754 aa20.45■□□□□ 0.86
VRK2-205ENST00000432057 NLRC5Q86WI3 1866 aa20.44■□□□□ 0.86
VRK2-205ENST00000432057 SHOX2O60902 331 aaPredicted RBP20.44■□□□□ 0.86
VRK2-205ENST00000432057 FAM163BP0C2L3 166 aa20.44■□□□□ 0.86
VRK2-205ENST00000432057 NPR3P17342 541 aa20.44■□□□□ 0.86
VRK2-205ENST00000432057 CA9Q16790 459 aa20.44■□□□□ 0.86
VRK2-205ENST00000432057 NPNTQ6UXI9 565 aa20.44■□□□□ 0.86
VRK2-205ENST00000432057 TRMT10CQ7L0Y3 403 aaKnown RBP20.44■□□□□ 0.86
VRK2-205ENST00000432057 TMEM86AQ8N2M4 240 aa20.44■□□□□ 0.86
VRK2-205ENST00000432057 TEKT4Q8WW24 435 aa20.44■□□□□ 0.86
VRK2-205ENST00000432057 NDRG1Q92597 394 aaKnown RBP20.44■□□□□ 0.86
VRK2-205ENST00000432057 PCDH9Q9HC56 1237 aa20.44■□□□□ 0.86
VRK2-205ENST00000432057 A0A0U1RQF3 1178 aa20.43■□□□□ 0.86
VRK2-205ENST00000432057 IFNB1P01574 187 aa20.43■□□□□ 0.86
VRK2-205ENST00000432057 DESP17661 470 aa20.43■□□□□ 0.86
VRK2-205ENST00000432057 HPDP32754 393 aaPredicted RBP20.43■□□□□ 0.86
VRK2-205ENST00000432057 ATXN1P54253 815 aaKnown RBP20.43■□□□□ 0.86
VRK2-205ENST00000432057 GDF10P55107 478 aa20.43■□□□□ 0.86
VRK2-205ENST00000432057 UPP1Q16831 310 aa20.43■□□□□ 0.86
VRK2-205ENST00000432057 CLEC20AQ6ZU45 233 aa20.43■□□□□ 0.86
VRK2-205ENST00000432057 HOOK3Q86VS8 718 aa20.43■□□□□ 0.86
VRK2-205ENST00000432057 C11orf84Q9BUA3 381 aaPredicted RBP20.43■□□□□ 0.86
VRK2-205ENST00000432057 INPP5FQ9Y2H2 1132 aa20.43■□□□□ 0.86
VRK2-205ENST00000432057 PATJQ8NI35 1801 aa20.43■□□□□ 0.86
VRK2-205ENST00000432057 I3L4J1 428 aa20.43■□□□□ 0.86
VRK2-205ENST00000432057 CAND2O75155 1236 aa20.43■□□□□ 0.86
VRK2-205ENST00000432057 ACSL3O95573 720 aa20.43■□□□□ 0.86
VRK2-205ENST00000432057 RPL9P32969 192 aaKnown RBP20.43■□□□□ 0.86
VRK2-205ENST00000432057 MAP2K2P36507 400 aa20.43■□□□□ 0.86
VRK2-205ENST00000432057 SLC8A3P57103 927 aa20.43■□□□□ 0.86
VRK2-205ENST00000432057 EIF3EP60228 445 aaKnown RBP20.43■□□□□ 0.86
VRK2-205ENST00000432057 PAN2Q504Q3 1202 aaKnown RBP20.43■□□□□ 0.86
VRK2-205ENST00000432057 BOLA3Q53S33 107 aa20.43■□□□□ 0.86
VRK2-205ENST00000432057 TTC19Q6DKK2 380 aaPredicted RBP20.43■□□□□ 0.86
VRK2-205ENST00000432057 GLT1D1Q96MS3 346 aa20.43■□□□□ 0.86
VRK2-205ENST00000432057 MAK16Q9BXY0 300 aaKnown RBP20.43■□□□□ 0.86
VRK2-205ENST00000432057 CAPS2Q9BXY5 557 aa20.43■□□□□ 0.86
VRK2-205ENST00000432057 TSPYL1Q9H0U9 437 aa20.43■□□□□ 0.86
VRK2-205ENST00000432057 TRPV6Q9H1D0 765 aa20.43■□□□□ 0.86
VRK2-205ENST00000432057 PCDH18Q9HCL0 1135 aa20.43■□□□□ 0.86
VRK2-205ENST00000432057 KRT82Q9NSB4 513 aa20.43■□□□□ 0.86
VRK2-205ENST00000432057 NOVA2Q9UNW9 492 aaKnown RBP20.43■□□□□ 0.86
VRK2-205ENST00000432057 BRCA2P51587 3418 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms