RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 PPP2R5DQ14738 602 aa9.66□□□□□ -0.86
SMC1A-203ENST00000428014 ITPRIPL2Q3MIP1 535 aa9.66□□□□□ -0.86
SMC1A-203ENST00000428014 PREPLQ4J6C6 727 aaPredicted RBP9.66□□□□□ -0.86
SMC1A-203ENST00000428014 DCAF17Q5H9S7 520 aaPredicted RBP9.66□□□□□ -0.86
SMC1A-203ENST00000428014 PM20D1Q6GTS8 502 aa9.66□□□□□ -0.86
SMC1A-203ENST00000428014 ACOT1Q86TX2 421 aa9.66□□□□□ -0.86
SMC1A-203ENST00000428014 TMEM105Q8N8V8 129 aa9.66□□□□□ -0.86
SMC1A-203ENST00000428014 DTWD2Q8NBA8 298 aa9.66□□□□□ -0.86
SMC1A-203ENST00000428014 SLC4A11Q8NBS3 891 aa9.66□□□□□ -0.86
SMC1A-203ENST00000428014 EHBP1Q8NDI1 1231 aa9.66□□□□□ -0.86
SMC1A-203ENST00000428014 SLC2A14Q8TDB8 520 aa9.66□□□□□ -0.86
SMC1A-203ENST00000428014 CSGALNACT1Q8TDX6 532 aa9.66□□□□□ -0.86
SMC1A-203ENST00000428014 OSCP1Q8WVF1 389 aa9.66□□□□□ -0.86
SMC1A-203ENST00000428014 NELL1Q92832 810 aa9.66□□□□□ -0.86
SMC1A-203ENST00000428014 ATP2A3Q93084 1043 aa9.66□□□□□ -0.86
SMC1A-203ENST00000428014 HSFY1Q96LI6 401 aa9.66□□□□□ -0.86
SMC1A-203ENST00000428014 EPAS1Q99814 870 aa9.66□□□□□ -0.86
SMC1A-203ENST00000428014 SMOQ99835 787 aa9.66□□□□□ -0.86
SMC1A-203ENST00000428014 SRRTQ9BXP5 876 aaKnown RBP9.66□□□□□ -0.86
SMC1A-203ENST00000428014 PLA2G2FQ9BZM2 168 aa9.66□□□□□ -0.86
SMC1A-203ENST00000428014 CHRDQ9H2X0 955 aa9.66□□□□□ -0.86
SMC1A-203ENST00000428014 KRT82Q9NSB4 513 aa9.66□□□□□ -0.86
SMC1A-203ENST00000428014 TMEM30AQ9NV96 361 aa9.66□□□□□ -0.86
SMC1A-203ENST00000428014 CACNA1IQ9P0X4 2223 aa9.66□□□□□ -0.86
SMC1A-203ENST00000428014 HELZP42694 1942 aaKnown RBP9.65□□□□□ -0.86
SMC1A-203ENST00000428014 MIA3Q5JRA6 1907 aa9.65□□□□□ -0.86
SMC1A-203ENST00000428014 A0A0A0MRY4 1105 aa9.65□□□□□ -0.86
SMC1A-203ENST00000428014 CCDC163A0A0D9SF12 145 aa9.65□□□□□ -0.86
SMC1A-203ENST00000428014 LRRC10BA6NIK2 292 aa9.65□□□□□ -0.86
SMC1A-203ENST00000428014 NRG2O14511 850 aaPredicted RBP9.65□□□□□ -0.86
SMC1A-203ENST00000428014 XPO1O14980 1071 aaKnown RBP9.65□□□□□ -0.86
SMC1A-203ENST00000428014 SART1O43290 800 aaKnown RBP9.65□□□□□ -0.86
SMC1A-203ENST00000428014 HCRTO43612 131 aa9.65□□□□□ -0.86
SMC1A-203ENST00000428014 NFATC1O95644 943 aa9.65□□□□□ -0.86
SMC1A-203ENST00000428014 CKMP06732 381 aa9.65□□□□□ -0.86
SMC1A-203ENST00000428014 ACO1P21399 889 aaKnown RBP9.65□□□□□ -0.86
SMC1A-203ENST00000428014 CTHP32929 405 aa9.65□□□□□ -0.86
SMC1A-203ENST00000428014 NBL1P41271 181 aa9.65□□□□□ -0.86
SMC1A-203ENST00000428014 VIPR2P41587 438 aa9.65□□□□□ -0.86
SMC1A-203ENST00000428014 PLA2G4AP47712 749 aa9.65□□□□□ -0.86
SMC1A-203ENST00000428014 RPL34P49207 117 aaKnown RBP9.65□□□□□ -0.86
SMC1A-203ENST00000428014 ZNF132P52740 706 aa9.65□□□□□ -0.86
SMC1A-203ENST00000428014 USP46P62068 366 aa9.65□□□□□ -0.86
SMC1A-203ENST00000428014 CYP4F8P98187 520 aa9.65□□□□□ -0.86
SMC1A-203ENST00000428014 BST2Q10589 180 aaKnown RBP9.65□□□□□ -0.86
SMC1A-203ENST00000428014 TAF10Q12962 218 aa9.65□□□□□ -0.86
SMC1A-203ENST00000428014 NR1H3Q13133 447 aa9.65□□□□□ -0.86
SMC1A-203ENST00000428014 RUNX3Q13761 415 aa9.65□□□□□ -0.86
SMC1A-203ENST00000428014 MTF1Q14872 753 aa9.65□□□□□ -0.86
SMC1A-203ENST00000428014 CNGA2Q16280 664 aa9.65□□□□□ -0.86
SMC1A-203ENST00000428014 MAN2A1Q16706 1144 aa9.65□□□□□ -0.86
SMC1A-203ENST00000428014 HSF5Q4G112 596 aaPredicted RBP9.65□□□□□ -0.86
SMC1A-203ENST00000428014 PKDCCQ504Y2 493 aa9.65□□□□□ -0.86
SMC1A-203ENST00000428014 SGO2Q562F6 1265 aa9.65□□□□□ -0.86
SMC1A-203ENST00000428014 HECTD3Q5T447 861 aa9.65□□□□□ -0.86
SMC1A-203ENST00000428014 LCE2DQ5TA82 110 aaPredicted RBP9.65□□□□□ -0.86
SMC1A-203ENST00000428014 TXNDC8Q6A555 127 aa9.65□□□□□ -0.86
SMC1A-203ENST00000428014 SPOPLQ6IQ16 392 aa9.65□□□□□ -0.86
SMC1A-203ENST00000428014 KLHL10Q6JEL2 608 aa9.65□□□□□ -0.86
SMC1A-203ENST00000428014 CC2D1AQ6P1N0 951 aaPredicted RBP9.65□□□□□ -0.86
SMC1A-203ENST00000428014 LCLAT1Q6UWP7 414 aa9.65□□□□□ -0.86
SMC1A-203ENST00000428014 IRF2BP1Q8IU81 584 aa9.65□□□□□ -0.86
SMC1A-203ENST00000428014 MAB21L3Q8N8X9 362 aa9.65□□□□□ -0.86
SMC1A-203ENST00000428014 ERCC4Q92889 916 aaPredicted RBP9.65□□□□□ -0.86
SMC1A-203ENST00000428014 MED15Q96RN5 788 aa9.65□□□□□ -0.86
SMC1A-203ENST00000428014 TWNKQ96RR1 684 aa9.65□□□□□ -0.86
SMC1A-203ENST00000428014 TRIM62Q9BVG3 475 aa9.65□□□□□ -0.86
SMC1A-203ENST00000428014 MAGED2Q9UNF1 606 aaPredicted RBP9.65□□□□□ -0.86
SMC1A-203ENST00000428014 CTNND2Q9UQB3 1225 aa9.65□□□□□ -0.86
SMC1A-203ENST00000428014 PIAS3Q9Y6X2 628 aa9.65□□□□□ -0.86
SMC1A-203ENST00000428014 RIF1Q5UIP0 2472 aaKnown RBP9.65□□□□□ -0.86
SMC1A-203ENST00000428014 FANCMQ8IYD8 2048 aa9.65□□□□□ -0.87
SMC1A-203ENST00000428014 O00370 1275 aa9.64□□□□□ -0.87
SMC1A-203ENST00000428014 BIN1O00499 593 aa9.64□□□□□ -0.87
SMC1A-203ENST00000428014 CAVIN2O95810 425 aa9.64□□□□□ -0.87
SMC1A-203ENST00000428014 GJA1P17302 382 aa9.64□□□□□ -0.87
SMC1A-203ENST00000428014 DRD1P21728 446 aa9.64□□□□□ -0.87
SMC1A-203ENST00000428014 RAP1GAPP47736 663 aa9.64□□□□□ -0.87
SMC1A-203ENST00000428014 GPR15P49685 360 aa9.64□□□□□ -0.87
SMC1A-203ENST00000428014 CACNA2D1P54289 1103 aa9.64□□□□□ -0.87
SMC1A-203ENST00000428014 NRLP54845 237 aa9.64□□□□□ -0.87
SMC1A-203ENST00000428014 EMP3P54852 163 aa9.64□□□□□ -0.87
SMC1A-203ENST00000428014 VCPP55072 806 aaKnown RBP9.64□□□□□ -0.87
SMC1A-203ENST00000428014 ZNF445P59923 1031 aa9.64□□□□□ -0.87
SMC1A-203ENST00000428014 GOLGA8FQ08AF8 430 aa9.64□□□□□ -0.87
SMC1A-203ENST00000428014 GOLGA8DPQ0D2H9 430 aa9.64□□□□□ -0.87
SMC1A-203ENST00000428014 TCF15Q12870 199 aa9.64□□□□□ -0.87
SMC1A-203ENST00000428014 FZD5Q13467 585 aa9.64□□□□□ -0.87
SMC1A-203ENST00000428014 CCINQ13939 588 aa9.64□□□□□ -0.87
SMC1A-203ENST00000428014 E2F5Q15329 346 aa9.64□□□□□ -0.87
SMC1A-203ENST00000428014 CAMK4Q16566 473 aa9.64□□□□□ -0.87
SMC1A-203ENST00000428014 STXBP5Q5T5C0 1151 aa9.64□□□□□ -0.87
SMC1A-203ENST00000428014 PPP1R26Q5T8A7 1209 aaPredicted RBP9.64□□□□□ -0.87
SMC1A-203ENST00000428014 TRIM65Q6PJ69 517 aa9.64□□□□□ -0.87
SMC1A-203ENST00000428014 ZC3H14Q6PJT7 736 aaKnown RBP9.64□□□□□ -0.87
SMC1A-203ENST00000428014 SCARA5Q6ZMJ2 495 aa9.64□□□□□ -0.87
SMC1A-203ENST00000428014 GBP6Q6ZN66 633 aa9.64□□□□□ -0.87
SMC1A-203ENST00000428014 TPRG1Q6ZUI0 275 aa9.64□□□□□ -0.87
SMC1A-203ENST00000428014 C1orf210Q8IVY1 113 aa9.64□□□□□ -0.87
SMC1A-203ENST00000428014 CPA6Q8N4T0 437 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms